AT2G03540 : -
Query Information
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AGICode AT2G03540
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G03540 transposable element gene 1 0.31 -0.3
2 AT2G38410 ENTH/VHS/GAT family protein 0.8 0.3 -0.31
3 AT4G17930 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.74 0.32 -0.33
4 AT2G39540 Gibberellin-regulated family protein 0.73 0.31 -0.31
5 AT1G49370 pseudogene, similar to OSJNBa0072F16.8, blastp match of 42%
identity and 6.6e-73 P-value to
GP|21739229|emb|CAD40984.1||AL606460 OSJNBa0072F16.8 {Oryza
sativa (japonica cultivar-group)}		 -0.72 0.31 -0.34
6 AT2G35160 SU(VAR)3-9 homolog 5 SET DOMAIN-CONTAINING PROTEIN 9,
SU(VAR)3-9 homolog 5		 -0.72 0.34 -0.29
7 AT1G58190 receptor like protein 9 receptor like protein 9, receptor
like protein 9		 -0.7 0.29 -0.3
8 AT5G13570 decapping 2 ATDCP2, decapping 2, TRIDENT 0.7 0.29 -0.32
9 AT1G71740 unknown protein; Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.3 -0.31
10 AT1G02050 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 6 -0.7 0.32 -0.32
11 AT1G04590 BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.7 0.32 -0.3
12 AT4G28650 Leucine-rich repeat transmembrane protein kinase family
protein		 -0.7 0.34 -0.31
13 AT1G49850 RING/U-box superfamily protein 0.69 0.31 -0.32
14 AT2G18750 Calmodulin-binding protein 0.69 0.31 -0.31
15 AT5G08139 RING/U-box superfamily protein 0.69 0.33 -0.29
16 AT2G27140 HSP20-like chaperones superfamily protein 0.69 0.33 -0.33
17 AT4G35590 RWP-RK domain-containing protein RWP-RK domain-containing 5 -0.69 0.3 -0.31
18 AT2G41310 response regulator 3 RESPONSE REGULATOR 8, response
regulator 3, response regulator 3		 -0.68 0.3 -0.32
19 AT3G63360 defensin-related -0.68 0.33 -0.3
20 AT1G50600 scarecrow-like 5 scarecrow-like 5 0.68 0.3 -0.3
21 AT1G10900 Phosphatidylinositol-4-phosphate 5-kinase family protein -0.68 0.34 -0.33
22 AT5G47100 calcineurin B-like protein 9 ATCBL9, calcineurin B-like protein
9		 -0.67 0.33 -0.31
23 AT4G21560 vacuolar protein sorting-associated protein 28 homolog 1 vacuolar protein sorting 28,
vacuolar protein
sorting-associated protein 28
homolog 1		 0.67 0.32 -0.32
24 AT2G21910 cytochrome P450, family 96, subfamily A, polypeptide 5 cytochrome P450, family 96,
subfamily A, polypeptide 5		 0.67 0.31 -0.28
25 AT4G31910 HXXXD-type acyl-transferase family protein -0.67 0.32 -0.31
26 AT2G36210 SAUR-like auxin-responsive protein family -0.66 0.32 -0.31
27 AT3G42090 transposable element gene -0.66 0.3 -0.33
28 AT5G62940 Dof-type zinc finger DNA-binding family protein DNA BINDING WITH ONE FINGER 5.6,
HIGH CAMBIAL ACTIVITY2		 0.66 0.3 -0.32
29 AT2G10970 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.66 0.31 -0.33
30 AT3G59850 Pectin lyase-like superfamily protein -0.66 0.3 -0.32
31 AT3G48210 CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex,
subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to
194 proteins in 72 species: Archae - 0; Bacteria - 4;
Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 -0.66 0.3 -0.33
32 AT5G11600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G19990.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.32 -0.31
33 AT1G48670 auxin-responsive GH3 family protein -0.65 0.33 -0.33
34 AT2G29410 metal tolerance protein B1 ATMTPB1, metal tolerance protein
B1		 0.65 0.3 -0.3
35 AT4G13060 F-box associated ubiquitination effector family protein -0.65 0.29 -0.31
36 AT1G38340 transposable element gene -0.65 0.34 -0.31
37 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.65 0.3 -0.31
38 AT1G73640 RAB GTPase homolog A6A RAB GTPase homolog A6A, RAB GTPase
homolog A6A		 -0.65 0.3 -0.31
39 AT5G42880 Plant protein of unknown function (DUF827) -0.65 0.32 -0.32
40 AT3G24210 Ankyrin repeat family protein -0.65 0.31 -0.29
41 AT1G57590 Pectinacetylesterase family protein -0.65 0.33 -0.34
42 AT5G39560 Galactose oxidase/kelch repeat superfamily protein -0.65 0.3 -0.32
43 AT4G25170 Uncharacterised conserved protein (UCP012943) 0.64 0.31 -0.32
44 AT3G48070 RING/U-box superfamily protein 0.64 0.31 -0.34
45 AT2G31900 myosin-like protein XIF MYOSIN 5, MYOSIN XI F, myosin-like
protein XIF		 -0.64 0.34 -0.31
46 AT2G20710 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.31 -0.31
47 AT2G27370 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 3		 -0.64 0.3 -0.29
48 AT5G60140 AP2/B3-like transcriptional factor family protein -0.64 0.32 -0.34
49 AT2G14630 transposable element gene -0.64 0.3 -0.32
50 AT5G54370 Late embryogenesis abundant (LEA) protein-related -0.64 0.29 -0.31
51 AT1G43020 Protein of unknown function, DUF547 -0.64 0.32 -0.33
52 AT1G68240 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.64 0.31 -0.29
53 AT3G62760 Glutathione S-transferase family protein ATGSTF13 -0.64 0.33 -0.32
54 AT1G77820 transposable element gene -0.63 0.3 -0.31
55 AT2G20160 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family
protein		 ARABIDOPSIS SKP1-LIKE 17, MEIDOS -0.63 0.31 -0.32
56 AT2G33790 arabinogalactan protein 30 arabinogalactan protein 30,
ATAGP30		 -0.63 0.31 -0.31
57 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23		 0.63 0.31 -0.3
58 AT5G39380 Plant calmodulin-binding protein-related -0.63 0.32 -0.33
59 AT5G46310 WRKY family transcription factor -0.63 0.31 -0.31
60 AT1G72200 RING/U-box superfamily protein -0.63 0.32 -0.32
61 AT4G04420 transposable element gene -0.63 0.33 -0.34
62 AT5G07270 XB3 ortholog 3 in Arabidopsis thaliana XB3 ortholog 3 in Arabidopsis
thaliana		 0.62 0.31 -0.33
63 AT5G37730 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.3 -0.3
64 AT1G28540 unknown protein; Has 25 Blast hits to 25 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.35 -0.34
65 AT2G17900 SET domain group 37 ASH1-related 1, SET domain group
37		 -0.62 0.32 -0.32
66 AT1G03170 Protein of unknown function (DUF3049) FANTASTIC FOUR 2 -0.62 0.34 -0.33
67 AT1G73620 Pathogenesis-related thaumatin superfamily protein -0.62 0.31 -0.33
68 AT3G31360 transposable element gene -0.62 0.3 -0.31
69 AT5G65330 AGAMOUS-like 78 AGAMOUS-like 78 -0.62 0.32 -0.32
70 AT5G02390 Protein of unknown function (DUF3741) DUO1-activated unknown 1 0.61 0.3 -0.31
71 AT3G07940 Calcium-dependent ARF-type GTPase activating protein family 0.61 0.33 -0.33
72 AT4G05200 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 cysteine-rich RLK (RECEPTOR-like
protein kinase) 25		 -0.61 0.31 -0.32
73 AT3G63250 homocysteine methyltransferase 2 HOMOCYSTEINE METHYLTRANSFERASE-2,
HOMOCYSTEINE METHYLTRANSFERASE-2,
homocysteine methyltransferase 2		 -0.61 0.32 -0.3
74 AT2G20350 Integrase-type DNA-binding superfamily protein 0.61 0.31 -0.32
75 AT5G60520 Late embryogenesis abundant (LEA) protein-related -0.61 0.32 -0.34
76 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.31 -0.31
77 AT2G14020 transposable element gene -0.61 0.31 -0.3
78 AT4G00280 BEST Arabidopsis thaliana protein match is: Leucine-rich
repeat transmembrane protein kinase protein
(TAIR:AT2G19210.1); Has 19 Blast hits to 19 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.32
79 AT4G39890 RAB GTPase homolog H1C RAB GTPase homolog H1C, RAB GTPase
homolog H1C		 0.61 0.32 -0.32
80 AT5G39310 expansin A24 ATEXP24, expansin A24, ATHEXP
ALPHA 1.19, EXPANSIN 24, expansin
A24		 0.6 0.29 -0.31
81 AT4G03570 Cystatin/monellin superfamily protein -0.6 0.31 -0.32
82 AT3G56670 BEST Arabidopsis thaliana protein match is: F-box and
associated interaction domains-containing protein
(TAIR:AT1G32420.1); Has 58 Blast hits to 47 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.34 -0.32
83 AT1G24620 EF hand calcium-binding protein family -0.6 0.31 -0.33
84 AT4G27140 seed storage albumin 1 AT2S1, seed storage albumin 1 0.6 0.31 -0.3
85 AT2G23400 Undecaprenyl pyrophosphate synthetase family protein -0.6 0.3 -0.33
86 AT2G46260 BTB/POZ/Kelch-associated protein 0.6 0.34 -0.32
87 AT3G43040 transposable element gene 0.6 0.32 -0.33
88 AT2G32360 Ubiquitin-like superfamily protein -0.59 0.3 -0.34
89 AT4G39610 Protein of unknown function, DUF617 0.59 0.32 -0.31
90 AT2G23640 Reticulan like protein B13 Reticulan like protein B13 0.59 0.33 -0.33
91 AT1G02820 Late embryogenesis abundant 3 (LEA3) family protein -0.59 0.31 -0.34
92 AT5G28620 protein kinase C-related 0.59 0.32 -0.34
93 AT4G19850 lectin-related ARABIDOPSIS THALIANA PHLOEM
PROTEIN 2-A2, phloem protein 2-A2,
PP2A2		 0.59 0.32 -0.32
94 AT2G45670 calcineurin B subunit-related 0.59 0.32 -0.34
95 AT2G12230 pseudogene, C-1-tetrahydrofolate synthase, blastp match of
91% identity and 2.9e-07 P-value to
GP|9843502|emb|CAC03667.1||AL133260 dJ292B18.2 (novel
protein similar to methylenetetrahydrofolate dehydrogenase
(NADP+ dependent), methenyltetrahydrofolate cyclohydrolase,
formyltetrahydrofolate synthetase (MTHFD1) (EC 1.5.1.5, EC
3.5.4.9, EC-TRUNCATED-		 -0.59 0.31 -0.33
96 AT3G29660 transposable element gene 0.59 0.31 -0.31
97 AT1G34750 Protein phosphatase 2C family protein -0.59 0.3 -0.31
98 AT2G34120 Cytochrome C oxidase polypeptide VIB family protein -0.58 0.3 -0.31
99 AT2G06150 transposable element gene -0.58 0.33 -0.32
100 AT5G13830 FtsJ-like methyltransferase family protein -0.58 0.32 -0.34
101 AT5G07550 glycine-rich protein 19 ATGRP19, glycine-rich protein 19 -0.58 0.31 -0.32
102 AT5G54130 Calcium-binding endonuclease/exonuclease/phosphatase family -0.58 0.32 -0.33
103 AT2G26360 Mitochondrial substrate carrier family protein -0.58 0.33 -0.32
104 AT2G20510 translocase inner membrane subunit 44-1 translocase inner membrane subunit
44-1, translocase inner membrane
subunit 44-1		 -0.58 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
105 C0103 Glutaric acid - - - -0.7 0.43 -0.43
106 C0086 Disinapylspermidine - - - 0.64 0.44 -0.48
107 C0080 Digalactosyldiacylglycerol-34:6 - Digalactosyldiacylglycerol-34:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.6 0.46 -0.47 C0080