AT2G32000 : -
Query Information
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AGICode AT2G32000
Description DNA topoisomerase, type IA, core
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G32000 DNA topoisomerase, type IA, core 1 0.35 -0.3
2 AT5G16510 Alpha-1,4-glucan-protein synthase family protein reversibly glycosylated
polypeptide 5, reversibly
glycosylated protein 5		 -0.67 0.34 -0.31
3 AT3G29220 transposable element gene 0.65 0.32 -0.32
4 AT1G08860 Calcium-dependent phospholipid-binding Copine family
protein		 BONZAI 3 0.65 0.31 -0.32
5 AT4G04760 Major facilitator superfamily protein 0.63 0.31 -0.32
6 AT3G17310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 AtDRM3, domains rearranged
methyltransferase 3		 0.6 0.31 -0.32
7 AT1G49400 Nucleic acid-binding, OB-fold-like protein embryo defective 1129 -0.6 0.31 -0.31
8 AT4G11120 translation elongation factor Ts (EF-Ts), putative -0.6 0.34 -0.3
9 AT1G12720 transposable element gene 0.6 0.32 -0.3
10 AT1G10000 Ribonuclease H-like superfamily protein 0.59 0.32 -0.31
11 AT2G30590 WRKY DNA-binding protein 21 WRKY DNA-binding protein 21 -0.59 0.29 -0.3
12 AT1G56570 Tetratricopeptide repeat (TPR)-like superfamily protein PENTATRICOPEPTIDE REPEAT PROTEIN
FOR GERMINATION ON NaCl		 0.58 0.31 -0.33
13 AT4G01880 methyltransferases -0.58 0.29 -0.31
14 AT2G19800 myo-inositol oxygenase 2 myo-inositol oxygenase 2 -0.58 0.31 -0.33
15 AT3G20470 glycine-rich protein 5 ATGRP-5, ATGRP5, GLYCINE-RICH
PROTEIN 5, glycine-rich protein 5		 -0.58 0.33 -0.33
16 AT4G08670 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.58 0.33 -0.32
17 AT5G09450 Tetratricopeptide repeat (TPR)-like superfamily protein -0.57 0.33 -0.31
18 AT1G52810 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.57 0.32 -0.31
19 AT3G32270 transposable element gene 0.57 0.32 -0.3
20 AT3G24480 Leucine-rich repeat (LRR) family protein 0.57 0.32 -0.3
21 AT5G17250 Alkaline-phosphatase-like family protein 0.56 0.3 -0.34
22 AT5G40260 Nodulin MtN3 family protein AtSWEET8, SWEET8 0.56 0.3 -0.31
23 AT5G57655 xylose isomerase family protein -0.56 0.34 -0.32
24 AT5G18510 Aminotransferase-like, plant mobile domain family protein 0.56 0.32 -0.31
25 AT2G17870 cold shock domain protein 3 ARABIDOPSIS COLD SHOCK DOMAIN
PROTEIN 3, cold shock domain
protein 3		 -0.56 0.32 -0.31
26 AT2G16600 rotamase CYP 3 rotamase CYP 3 -0.56 0.31 -0.3
27 AT2G29970 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 0.55 0.33 -0.31
28 AT2G43350 glutathione peroxidase 3 glutathione peroxidase 3,
glutathione peroxidase 3		 -0.55 0.31 -0.3
29 AT5G52230 methyl-CPG-binding domain protein 13 methyl-CPG-binding domain protein
13		 0.55 0.3 -0.32
30 AT3G58330 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.54 0.34 -0.35
31 AT3G12510 MADS-box family protein -0.54 0.29 -0.31
32 AT2G45520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages; Has
260 Blast hits to 238 proteins in 75 species: Archae - 0;
Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38;
Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).		 -0.53 0.3 -0.32
33 AT5G10270 cyclin-dependent kinase C;1 cyclin-dependent kinase C;1 -0.53 0.32 -0.32
34 AT2G19050 GDSL-like Lipase/Acylhydrolase superfamily protein 0.53 0.31 -0.34
35 AT5G18690 arabinogalactan protein 25 arabinogalactan protein 25,
ARABIDOPSIS THALIANA
ARABINOGALACTAN PROTEINS 25		 -0.53 0.32 -0.31
36 AT1G05120 Helicase protein with RING/U-box domain 0.53 0.36 -0.32
37 AT1G64780 ammonium transporter 1;2 ammonium transporter 1;2, ammonium
transporter 1;2		 0.53 0.31 -0.32
38 AT5G60630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.53 0.34 -0.3
39 AT4G36590 MADS-box transcription factor family protein 0.53 0.31 -0.31
40 AT2G40030 nuclear RNA polymerase D1B ATNRPD1B, DEFECTIVE IN MERISTEM
SILENCING 5, DRD3, nuclear RNA
polymerase D1B, NRPE1		 0.53 0.31 -0.31
41 AT4G36550 ARM repeat superfamily protein 0.53 0.33 -0.31
42 ATCG00660 ribosomal protein L20 ribosomal protein L20 0.53 0.34 -0.31
43 AT5G12190 RNA-binding (RRM/RBD/RNP motifs) family protein -0.53 0.31 -0.31
44 AT1G44478 Cyclophilin 0.53 0.32 -0.31
45 AT2G21230 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.52 0.31 -0.31
46 AT4G10510 Subtilase family protein 0.52 0.31 -0.33
47 AT2G29920 unknown protein; Has 14 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 0.52 0.32 -0.3
48 AT1G73120 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; EXPRESSED IN:
root, cultured cell; Has 36 Blast hits to 36 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.31 -0.33
49 AT1G60650 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 AtRZ-1b, RZ-1b -0.52 0.32 -0.31
50 AT5G16850 telomerase reverse transcriptase telomerase reverse transcriptase,
telomerase reverse transcriptase		 -0.51 0.34 -0.32
51 AT1G29750 receptor-like kinase in flowers 1 receptor-like kinase in flowers 1 0.51 0.3 -0.32
52 AT4G28140 Integrase-type DNA-binding superfamily protein 0.51 0.3 -0.32
53 AT5G14430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.51 0.32 -0.32
54 AT2G34340 Protein of unknown function, DUF584 -0.51 0.32 -0.34
55 AT5G03270 lysine decarboxylase family protein LONELY GUY 6 0.51 0.31 -0.29
56 AT3G56760 Protein kinase superfamily protein 0.51 0.34 -0.32
57 AT2G29995 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G07175.1); Has 14 Blast hits to 14 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.5 0.33 -0.32
58 AT4G32970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32960.1); Has 552 Blast hits
to 489 proteins in 85 species: Archae - 4; Bacteria - 14;
Metazoa - 187; Fungi - 12; Plants - 225; Viruses - 0; Other
Eukaryotes - 110 (source: NCBI BLink).		 0.5 0.31 -0.34
59 AT4G34870 rotamase cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
1, rotamase cyclophilin 5		 -0.5 0.3 -0.32
60 AT5G56770 BEST Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 41 Blast hits to 41
proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.5 0.31 -0.31
61 AT2G18510 RNA-binding (RRM/RBD/RNP motifs) family protein embryo defective 2444 -0.5 0.31 -0.31
62 AT1G56360 purple acid phosphatase 6 ATPAP6, purple acid phosphatase 6 0.49 0.31 -0.3
63 AT3G19090 RNA-binding protein 0.49 0.32 -0.32
64 AT5G29030 pseudogene, hypothetical protein 0.49 0.3 -0.31
65 AT4G00910 Aluminium activated malate transporter family protein 0.49 0.3 -0.33
66 AT4G21240 F-box and associated interaction domains-containing protein 0.48 0.31 -0.34
67 AT2G23460 extra-large G-protein 1 ATXLG1, extra-large G-protein 1 0.48 0.33 -0.3
68 AT5G61090 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.48 0.34 -0.32
69 AT3G13680 F-box and associated interaction domains-containing protein -0.46 0.31 -0.3
70 AT3G51610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; Has 53 Blast hits to 53
proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 NO PRIMEXINE AND PLASMA MEMBRANE
UNDULATION		 -0.46 0.3 -0.31
71 AT5G65850 F-box and associated interaction domains-containing protein -0.45 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
72 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis 0.71 0.47 -0.44 C0003
73 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) 0.56 0.32 -0.32 C0142