AT2G06640 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G06640
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G06640 transposable element gene 1 0.35 -0.31
2 AT5G54420 Protein of unknown function (DUF295) -0.74 0.32 -0.32
3 AT1G22290 14-3-3 family protein -0.73 0.29 -0.3
4 AT1G58300 heme oxygenase 4 heme oxygenase 4 -0.72 0.3 -0.3
5 AT1G67570 Protein of unknown function (DUF3537) -0.71 0.32 -0.3
6 AT5G28070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.7 0.32 -0.33
7 AT2G37140 Terpenoid synthases superfamily protein 0.7 0.3 -0.29
8 AT2G34230 Protein with domains of unknown function (DUF627 and
DUF629)		 -0.69 0.31 -0.32
9 AT3G13170 Spo11/DNA topoisomerase VI, subunit A protein ATSPO11-1 -0.69 0.31 -0.34
10 AT3G12950 Trypsin family protein -0.68 0.3 -0.32
11 AT5G60280 Concanavalin A-like lectin protein kinase family protein -0.68 0.3 -0.33
12 AT2G05000 transposable element gene -0.68 0.31 -0.31
13 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 -0.68 0.3 -0.33
14 AT1G18340 basal transcription factor complex subunit-related -0.68 0.31 -0.33
15 AT4G20235 cytochrome P450, family 71, subfamily A, polypeptide 28 cytochrome P450, family 71,
subfamily A, polypeptide 28		 -0.68 0.34 -0.32
16 AT5G13130 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 0.67 0.33 -0.29
17 AT1G77680 Ribonuclease II/R family protein -0.67 0.32 -0.33
18 AT3G26150 cytochrome P450, family 71, subfamily B, polypeptide 16 cytochrome P450, family 71,
subfamily B, polypeptide 16		 -0.66 0.31 -0.32
19 AT3G42430 transposable element gene 0.66 0.3 -0.32
20 AT3G13662 Disease resistance-responsive (dirigent-like protein)
family protein		 0.66 0.31 -0.32
21 AT3G46360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44755.1); Has 4 Blast hits to
4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.66 0.31 -0.32
22 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.66 0.31 -0.3
23 AT1G30350 Pectin lyase-like superfamily protein -0.66 0.32 -0.32
24 AT2G29780 Galactose oxidase/kelch repeat superfamily protein -0.66 0.32 -0.31
25 AT1G69470 unknown protein; Has 6 Blast hits to 6 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.31 -0.32
26 AT5G28700 transposable element gene -0.66 0.33 -0.32
27 AT3G19880 F-box and associated interaction domains-containing protein -0.65 0.3 -0.33
28 AT3G42600 transposable element gene -0.65 0.3 -0.31
29 AT3G32220 transposable element gene 0.65 0.31 -0.33
30 AT5G14620 domains rearranged methyltransferase 2 DMT7, domains rearranged
methyltransferase 2		 -0.65 0.31 -0.31
31 AT1G14200 RING/U-box superfamily protein 0.65 0.31 -0.32
32 AT3G18900 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: synergid; CONTAINS InterPro
DOMAIN/s: F-box associated domain, type 1
(InterPro:IPR006527), F-box associated interaction domain
(InterPro:IPR017451), Protein of unknown function DUF547
(InterPro:IPR006869); BEST Arabidopsis thaliana protein
match is: Protein of unknown function, DUF547
(TAIR:AT5G66600.3).		 -0.65 0.32 -0.32
33 AT4G11590 F-box associated ubiquitination effector family protein -0.64 0.32 -0.3
34 AT1G04670 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2;
Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.34 -0.32
35 AT1G68460 isopentenyltransferase 1 Arabidopsis thaliana
isopentenyltransferase 1,
isopentenyltransferase 1		 -0.64 0.32 -0.32
36 AT1G20480 AMP-dependent synthetase and ligase family protein 0.64 0.29 -0.3
37 AT5G27190 transposable element gene -0.64 0.33 -0.33
38 AT1G49100 Leucine-rich repeat protein kinase family protein 0.64 0.31 -0.31
39 AT5G57690 diacylglycerol kinase 4 ATDGK4, diacylglycerol kinase 4 -0.64 0.31 -0.33
40 AT4G08970 transposable element gene 0.64 0.32 -0.33
41 AT3G04200 RmlC-like cupins superfamily protein -0.64 0.3 -0.3
42 AT5G66890 Leucine-rich repeat (LRR) family protein -0.64 0.32 -0.32
43 AT4G23930 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.64 0.29 -0.32
44 AT3G03370 BEST Arabidopsis thaliana protein match is: DegP protease 7
(TAIR:AT3G03380.1); Has 55 Blast hits to 55 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.34 -0.31
45 AT3G42290 transposable element gene 0.63 0.34 -0.31
46 AT4G24580 Rho GTPase activation protein (RhoGAP) with PH domain ROP1 ENHANCER 1 0.63 0.32 -0.32
47 AT4G02170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.34 -0.31
48 AT5G37170 O-methyltransferase family protein -0.63 0.32 -0.33
49 AT2G13230 transposable element gene 0.63 0.32 -0.31
50 AT2G30780 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.3 -0.31
51 AT1G23540 Protein kinase superfamily protein proline-rich extensin like
receptor kinase, INFLORESCENCE
GROWTH INHIBITOR 1, proline-rich
extensin-like receptor kinase 12		 0.63 0.29 -0.32
52 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.28 -0.31
53 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 -0.63 0.32 -0.33
54 AT5G17140 Cysteine proteinases superfamily protein -0.63 0.32 -0.33
55 AT5G38950 RmlC-like cupins superfamily protein -0.63 0.31 -0.32
56 AT2G32415 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 -0.63 0.32 -0.33
57 AT1G12620 Pentatricopeptide repeat (PPR) superfamily protein -0.62 0.32 -0.3
58 AT1G74220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, flower, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast
hits to 347 proteins in 86 species: Archae - 0; Bacteria -
17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2;
Other Eukaryotes - 136 (source: NCBI BLink).		 0.62 0.3 -0.31
59 AT1G35380 transposable element gene 0.62 0.32 -0.33
60 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED -0.62 0.32 -0.3
61 AT4G28560 ROP-interactive CRIB motif-containing protein 7 ROP-interactive CRIB
motif-containing protein 7		 0.62 0.31 -0.33
62 AT4G20060 ARM repeat superfamily protein EMBRYO DEFECTIVE 1895 -0.62 0.31 -0.3
63 AT2G41060 RNA-binding (RRM/RBD/RNP motifs) family protein -0.62 0.32 -0.32
64 AT3G14400 ubiquitin-specific protease 25 ubiquitin-specific protease 25 -0.62 0.32 -0.3
65 AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein -0.62 0.32 -0.31
66 AT2G02515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: central cell, embryo;
EXPRESSED DURING: C globular stage; Has 18 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.31 -0.29
67 AT3G03080 Zinc-binding dehydrogenase family protein -0.61 0.31 -0.33
68 AT3G52510 F-box associated ubiquitination effector family protein -0.61 0.31 -0.3
69 AT3G51590 lipid transfer protein 12 lipid transfer protein 12 -0.61 0.32 -0.35
70 AT3G25490 Protein kinase family protein -0.61 0.35 -0.31
71 AT5G57320 villin, putative villin 5 -0.61 0.3 -0.3
72 AT4G27550 trehalose-6-phosphatase synthase S4 ARABIDOPSIS THALIANA TREHALOSE
PHOSPHATASE/SYNTHASE 4,
trehalose-6-phosphatase synthase
S4		 -0.61 0.31 -0.29
73 AT5G49320 Protein of unknown function (DUF1218) -0.6 0.29 -0.33
74 AT4G20200 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.6 0.29 -0.33
75 AT2G36700 Pectin lyase-like superfamily protein -0.6 0.29 -0.33
76 AT4G18500 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.32 -0.32
77 AT5G09390 CD2-binding protein-related 0.6 0.3 -0.32
78 ATMG00110 cytochrome C biogenesis 206 ATP-binding cassette I2,
cytochrome C biogenesis 206		 0.6 0.31 -0.3
79 AT5G11370 FBD / Leucine Rich Repeat domains containing protein 0.6 0.31 -0.32
80 AT1G54140 TATA binding protein associated factor 21kDa subunit TBP-ASSOCIATED FACTOR 9, TATA
binding protein associated factor
21kDa subunit		 0.6 0.34 -0.29
81 AT1G36910 transposable element gene 0.6 0.3 -0.32
82 AT3G23040 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.31 -0.32
83 AT2G28680 RmlC-like cupins superfamily protein -0.6 0.31 -0.31
84 AT2G10010 transposable element gene -0.6 0.32 -0.32
85 AT2G07740 transposable element gene -0.6 0.31 -0.32
86 AT1G39430 transposable element gene -0.6 0.3 -0.31
87 AT4G34440 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 5, proline-rich
extensin-like receptor kinase 5		 -0.6 0.3 -0.34
88 AT1G69190 Dihydropterin pyrophosphokinase / Dihydropteroate synthase -0.6 0.32 -0.31
89 AT5G14980 alpha/beta-Hydrolases superfamily protein -0.6 0.31 -0.32
90 AT2G26420 1-phosphatidylinositol-4-phosphate 5-kinase 3 1-phosphatidylinositol-4-phosphate
5-kinase 3		 0.6 0.31 -0.3
91 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family -0.59 0.32 -0.32
92 AT2G37320 Tetratricopeptide repeat (TPR)-like superfamily protein 0.59 0.34 -0.31
93 AT3G03230 alpha/beta-Hydrolases superfamily protein -0.59 0.33 -0.3
94 AT1G56610 Protein with RNI-like/FBD-like domains 0.59 0.29 -0.32
95 AT3G42730 transposable element gene 0.59 0.35 -0.31
96 AT3G06230 MAP kinase kinase 8 MAP kinase kinase 8, MAP kinase
kinase 8		 -0.59 0.3 -0.32
97 AT5G12180 calcium-dependent protein kinase 17 calcium-dependent protein kinase
17		 -0.59 0.32 -0.31
98 AT2G04420 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.59 0.3 -0.29
99 AT4G22620 SAUR-like auxin-responsive protein family 0.59 0.3 -0.32
100 AT5G61740 ABC2 homolog 14 ATP-binding cassette A10,
ARABIDOPSIS THALIANA ABC2 HOMOLOG
14, ABC2 homolog 14		 -0.59 0.31 -0.35
101 AT5G49750 Leucine-rich repeat (LRR) family protein 0.59 0.33 -0.3
102 AT4G04980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast
hits to 15699 proteins in 1063 species: Archae - 116;
Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants -
3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI
BLink).		 -0.59 0.32 -0.31
103 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 -0.59 0.33 -0.31
104 AT1G72960 Root hair defective 3 GTP-binding protein (RHD3) 0.59 0.35 -0.3
105 AT1G27160 valyl-tRNA synthetase / valine--tRNA ligase-related 0.59 0.33 -0.32
106 AT1G56540 Disease resistance protein (TIR-NBS-LRR class) family 0.59 0.33 -0.33
107 AT3G46920 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.59 0.34 -0.32
108 AT3G02270 Trimeric LpxA-like enzyme 0.59 0.32 -0.3
109 AT5G37610 Eukaryotic porin family protein -0.59 0.3 -0.3
110 AT5G10880 tRNA synthetase-related / tRNA ligase-related -0.59 0.32 -0.31
111 AT5G03280 NRAMP metal ion transporter family protein ATEIN2, CYTOKININ RESISTANT 1,
ETHYLENE INSENSITIVE 2, ENHANCED
RESPONSE TO ABA3, ORESARA 2,
ORESARA 3, PIR2		 -0.59 0.33 -0.3
112 AT3G26160 cytochrome P450, family 71, subfamily B, polypeptide 17 cytochrome P450, family 71,
subfamily B, polypeptide 17		 -0.59 0.3 -0.32
113 ATMG01000 hypothetical protein ORF114 0.59 0.31 -0.33
114 AT5G46295 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.58 0.32 -0.32
115 AT2G19410 U-box domain-containing protein kinase family protein 0.58 0.32 -0.32
116 AT3G21400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; Has 29 Blast hits to 29 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants -
27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.33 -0.32
117 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 0.58 0.33 -0.31
118 AT3G42860 zinc knuckle (CCHC-type) family protein 0.58 0.32 -0.31
119 AT1G39750 transposable element gene 0.57 0.31 -0.32
120 AT4G03600 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.57 0.32 -0.31
121 AT3G26790 AP2/B3-like transcriptional factor family protein FUSCA 3 0.57 0.32 -0.3
122 AT5G62250 microtubule-associated protein 65-9 microtubule-associated protein
65-9		 0.57 0.3 -0.33
123 AT4G00130 DNA-binding storekeeper protein-related transcriptional
regulator		 0.57 0.32 -0.3
124 AT5G35550 Duplicated homeodomain-like superfamily protein MYB DOMAIN PROTEIN 123, ATTT2, MYB
DOMAIN PROTEIN 123, TRANSPARENT
TESTA 2		 0.57 0.32 -0.33
125 AT1G66210 Subtilisin-like serine endopeptidase family protein 0.56 0.31 -0.31
126 AT2G43270 F-box and associated interaction domains-containing protein 0.56 0.3 -0.3
127 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein 0.56 0.32 -0.35
128 AT2G19100 transposable element gene 0.55 0.29 -0.32
129 AT2G26150 heat shock transcription factor A2 heat shock transcription factor
A2, heat shock transcription
factor A2		 0.55 0.33 -0.3
130 AT2G32560 F-box family protein 0.55 0.31 -0.3
131 AT3G51910 heat shock transcription factor A7A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A7A, heat
shock transcription factor A7A		 0.55 0.31 -0.31
132 AT1G14750 Cyclin family protein SOLO DANCERS 0.55 0.3 -0.3
133 AT5G44140 prohibitin 7 prohibitin 7, prohibitin 7 0.55 0.33 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
134 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		-0.61 0.44 -0.43 C0015