AT2G48060 : -
Query Information
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AGICode AT2G48060
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 1 0.32 -0.32
2 AT3G42430 transposable element gene -0.78 0.33 -0.34
3 AT4G25770 alpha/beta-Hydrolases superfamily protein -0.76 0.31 -0.3
4 AT2G05200 transposable element gene 0.76 0.31 -0.29
5 AT1G77405 Pentatricopeptide repeat (PPR) superfamily protein 0.75 0.31 -0.32
6 AT1G50910 unknown protein; Has 1105 Blast hits to 802 proteins in 217
species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi -
210; Plants - 58; Viruses - 6; Other Eukaryotes - 207
(source: NCBI BLink).		 0.74 0.3 -0.32
7 AT4G38000 DNA binding with one finger 4.7 DNA binding with one finger 4.7 0.74 0.33 -0.32
8 AT5G28880 transposable element gene 0.74 0.33 -0.31
9 AT1G58300 heme oxygenase 4 heme oxygenase 4 0.74 0.3 -0.33
10 AT5G05260 cytochrome p450 79a2 cytochrome p450 79a2 0.74 0.3 -0.32
11 AT4G25350 EXS (ERD1/XPR1/SYG1) family protein SHORT HYPOCOTYL UNDER BLUE1 0.74 0.35 -0.3
12 AT2G13940 transposable element gene 0.73 0.32 -0.32
13 AT1G22290 14-3-3 family protein 0.73 0.34 -0.31
14 AT2G06820 transposable element gene 0.72 0.31 -0.32
15 AT2G36550 CONTAINS InterPro DOMAIN/s: NLI interacting factor
(InterPro:IPR004274); BEST Arabidopsis thaliana protein
match is: Haloacid dehalogenase-like hydrolase (HAD)
superfamily protein (TAIR:AT2G36540.1); Has 91 Blast hits
to 91 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 2; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.72 0.3 -0.32
16 AT3G44770 Protein of unknown function (DUF626) 0.72 0.3 -0.33
17 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 0.72 0.28 -0.34
18 AT5G46310 WRKY family transcription factor 0.72 0.31 -0.32
19 AT1G59535 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.71 0.34 -0.31
20 AT5G10120 Ethylene insensitive 3 family protein 0.71 0.34 -0.33
21 AT3G62440 F-box/RNI-like superfamily protein secondary wall
thickening-associated F-box 1		 0.71 0.29 -0.32
22 AT3G18450 PLAC8 family protein -0.71 0.33 -0.31
23 AT2G35890 calcium-dependent protein kinase 25 calcium-dependent protein kinase
25		 -0.71 0.32 -0.31
24 AT3G55770 GATA type zinc finger transcription factor family protein WLIM2b -0.71 0.32 -0.31
25 AT3G18900 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: synergid; CONTAINS InterPro
DOMAIN/s: F-box associated domain, type 1
(InterPro:IPR006527), F-box associated interaction domain
(InterPro:IPR017451), Protein of unknown function DUF547
(InterPro:IPR006869); BEST Arabidopsis thaliana protein
match is: Protein of unknown function, DUF547
(TAIR:AT5G66600.3).		 0.71 0.32 -0.34
26 AT5G17690 like heterochromatin protein (LHP1) AtLHP1, LIKE HETEROCHROMATIN
PROTEIN 1, TERMINAL FLOWER 2		 0.7 0.31 -0.31
27 AT2G25560 DNAJ heat shock N-terminal domain-containing protein 0.7 0.33 -0.31
28 AT5G03060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11100.2); Has 14506 Blast
hits to 10808 proteins in 1083 species: Archae - 280;
Bacteria - 2737; Metazoa - 4707; Fungi - 940; Plants - 571;
Viruses - 106; Other Eukaryotes - 5165 (source: NCBI
BLink).		 0.7 0.31 -0.3
29 AT2G27750 Surfeit locus protein 6 0.7 0.33 -0.3
30 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12		 0.7 0.31 -0.34
31 AT2G11360 transposable element gene 0.69 0.31 -0.32
32 AT3G54270 sucrose-6F-phosphate phosphohydrolase family protein 0.69 0.32 -0.34
33 AT4G27690 vacuolar protein sorting 26B vacuolar protein sorting 26B -0.69 0.31 -0.34
34 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED 0.69 0.32 -0.3
35 AT1G06060 LisH and RanBPM domains containing protein -0.69 0.31 -0.29
36 AT4G08710 transposable element gene -0.69 0.33 -0.31
37 AT2G19790 SNARE-like superfamily protein -0.69 0.34 -0.32
38 AT3G12840 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.69 0.3 -0.33
39 AT4G20410 gamma-soluble NSF attachment protein GAMMA-SOLUBLE NSF ATTACHMENT
PROTEIN, gamma-soluble NSF
attachment protein		 -0.68 0.33 -0.32
40 AT4G13380 Heavy metal transport/detoxification superfamily protein maternal effect embryo arrest 56 -0.68 0.31 -0.31
41 AT1G68460 isopentenyltransferase 1 Arabidopsis thaliana
isopentenyltransferase 1,
isopentenyltransferase 1		 0.68 0.32 -0.3
42 AT3G18120 F-box associated ubiquitination effector family protein 0.68 0.31 -0.3
43 AT2G15110 Protein of unknown function, DUF601 -0.68 0.3 -0.31
44 AT2G29560 cytosolic enolase cytosolic enolase -0.68 0.3 -0.31
45 AT3G47850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 12 growth stages; Has 57 Blast hits to 57 proteins
in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12;
Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7
(source: NCBI BLink).		 -0.68 0.34 -0.31
46 AT5G24130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, flower;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.29 -0.31
47 AT4G10880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10870.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.68 0.3 -0.32
48 AT5G14620 domains rearranged methyltransferase 2 DMT7, domains rearranged
methyltransferase 2		 0.68 0.3 -0.35
49 AT3G26160 cytochrome P450, family 71, subfamily B, polypeptide 17 cytochrome P450, family 71,
subfamily B, polypeptide 17		 0.68 0.32 -0.32
50 AT3G19950 RING/U-box superfamily protein -0.67 0.34 -0.3
51 AT1G11060 WAPL (Wings apart-like protein regulation of
heterochromatin) protein		 0.67 0.29 -0.31
52 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 -0.67 0.3 -0.33
53 AT1G47680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G47700.1); Has 3 Blast
hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.3 -0.32
54 AT5G65710 HAESA-like 2 HAESA-like 2 0.67 0.29 -0.31
55 AT4G18500 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.29 -0.33
56 AT1G56230 Protein of unknown function (DUF1399) 0.67 0.31 -0.32
57 AT5G38610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.67 0.32 -0.31
58 AT4G01710 ARP2/3 complex 16 kDa subunit (p16-Arc) ARPC5, CROOKED -0.67 0.32 -0.31
59 AT3G42600 transposable element gene 0.67 0.32 -0.31
60 AT2G42670 Protein of unknown function (DUF1637) -0.67 0.32 -0.31
61 AT4G04560 transposable element gene -0.67 0.32 -0.3
62 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.32 -0.31
63 AT4G13820 Leucine-rich repeat (LRR) family protein 0.67 0.33 -0.33
64 AT4G03690 transposable element gene 0.67 0.3 -0.32
65 AT3G26870 Plant self-incompatibility protein S1 family 0.67 0.31 -0.31
66 AT2G21600 endoplasmatic reticulum retrieval protein 1B endoplasmatic reticulum retrieval
protein 1B, endoplasmatic
reticulum retrieval protein 1B		 -0.67 0.33 -0.34
67 AT1G45545 Plant protein of unknown function (DUF827) 0.67 0.32 -0.31
68 AT4G25010 Nodulin MtN3 family protein AtSWEET14, SWEET14 0.66 0.33 -0.32
69 AT3G18770 Autophagy-related protein 13 0.66 0.31 -0.32
70 AT1G72570 Integrase-type DNA-binding superfamily protein -0.66 0.31 -0.33
71 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein -0.66 0.32 -0.33
72 AT3G46070 C2H2-type zinc finger family protein 0.66 0.32 -0.32
73 AT3G58460 RHOMBOID-like protein 15 RHOMBOID-like protein 15,
RHOMBOID-like protein 15		 -0.66 0.3 -0.32
74 AT2G37975 Yos1-like protein -0.66 0.33 -0.31
75 AT5G46440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.66 0.33 -0.32
76 AT2G02830 transposable element gene 0.66 0.31 -0.34
77 AT2G19630 F-box and associated interaction domains-containing protein 0.65 0.31 -0.34
78 AT2G04340 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.31 -0.32
79 AT1G26860 transposable element gene -0.65 0.31 -0.33
80 AT5G23770 DOMAIN OF UNKNOWN FUNCTION 724 8 DOMAIN OF UNKNOWN FUNCTION 724 8,
DOMAIN OF UNKNOWN FUNCTION 724 8		 0.65 0.32 -0.29
81 AT5G59910 Histone superfamily protein HTB4 -0.65 0.31 -0.3
82 AT3G10890 Glycosyl hydrolase superfamily protein -0.65 0.31 -0.3
83 AT5G26700 RmlC-like cupins superfamily protein 0.65 0.34 -0.33
84 AT5G37610 Eukaryotic porin family protein 0.65 0.33 -0.33
85 AT5G48140 Pectin lyase-like superfamily protein -0.65 0.32 -0.3
86 AT4G03860 transposable element gene -0.65 0.31 -0.31
87 AT4G18410 transposable element gene 0.65 0.31 -0.31
88 AT4G08420 transposable element gene -0.64 0.3 -0.31
89 AT5G39310 expansin A24 ATEXP24, expansin A24, ATHEXP
ALPHA 1.19, EXPANSIN 24, expansin
A24		 -0.64 0.32 -0.33
90 AT1G20480 AMP-dependent synthetase and ligase family protein -0.64 0.32 -0.31
91 AT2G07560 H(+)-ATPase 6 H(+)-ATPase 6, H(+)-ATPase 6 -0.64 0.34 -0.31
92 AT2G29770 Galactose oxidase/kelch repeat superfamily protein 0.64 0.32 -0.32
93 AT3G24780 Uncharacterised conserved protein UCP015417, vWA 0.64 0.33 -0.32
94 AT1G26530 PIN domain-like family protein -0.64 0.31 -0.32
95 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 0.64 0.33 -0.28
96 AT1G28135 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 7 Blast hits to 7 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.34 -0.3
97 AT1G10670 ATP-citrate lyase A-1 ATP-citrate lyase A-1 -0.64 0.32 -0.32
98 AT2G27375 transposable element gene 0.64 0.32 -0.3
99 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.64 0.3 -0.32
100 AT3G43100 transposable element gene 0.63 0.31 -0.31
101 AT2G16010 transposable element gene -0.63 0.29 -0.34
102 AT2G32360 Ubiquitin-like superfamily protein 0.63 0.34 -0.32
103 AT2G37500 arginine biosynthesis protein ArgJ family -0.63 0.33 -0.33
104 AT5G51700 protein binding;zinc ion binding ATRAR1, PPHB SUSCEPTIBLE 2,
Required for Mla12 resistance 1,
RPR2		 -0.63 0.31 -0.32
105 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD		 -0.63 0.31 -0.32
106 AT4G36370 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.31 -0.32
107 AT1G44050 Cysteine/Histidine-rich C1 domain family protein -0.63 0.31 -0.28
108 AT1G20150 Subtilisin-like serine endopeptidase family protein 0.63 0.32 -0.3
109 AT3G11270 Mov34/MPN/PAD-1 family protein maternal effect embryo arrest 34 -0.63 0.32 -0.32
110 AT1G12150 Plant protein of unknown function (DUF827) -0.63 0.29 -0.29
111 AT4G38680 glycine rich protein 2 ARABIDOPSIS THALIANA COLD SHOCK
PROTEIN 2, COLD SHOCK DOMAIN
PROTEIN 2, COLD SHOCK PROTEIN 2,
glycine rich protein 2		 -0.63 0.31 -0.32
112 AT5G39370 Curculin-like (mannose-binding) lectin family protein -0.63 0.32 -0.33
113 AT1G63190 Cystatin/monellin superfamily protein 0.63 0.31 -0.33
114 AT5G20090 Uncharacterised protein family (UPF0041) -0.63 0.33 -0.31
115 AT1G53690 DNA directed RNA polymerase, 7 kDa subunit -0.63 0.32 -0.34
116 AT4G18720 Transcription factor IIS protein -0.62 0.31 -0.34
117 AT1G23750 Nucleic acid-binding, OB-fold-like protein -0.62 0.33 -0.31
118 AT2G40600 appr-1-p processing enzyme family protein -0.62 0.29 -0.33
119 AT1G07980 nuclear factor Y, subunit C10 nuclear factor Y, subunit C10 -0.62 0.32 -0.31
120 AT2G32690 glycine-rich protein 23 GLYCINE-RICH PROTEIN 23,
glycine-rich protein 23		 -0.62 0.33 -0.29
121 AT4G30480 Tetratricopeptide repeat (TPR)-like superfamily protein AtTPR1, tetratricopeptide repeat 1 -0.62 0.32 -0.33
122 AT3G52760 Integral membrane Yip1 family protein -0.62 0.31 -0.32
123 AT4G05000 Vacuolar protein sorting-associated protein VPS28 family
protein		 vacuolar protein
sorting-associated protein 28
homolog 1, VPS28-2		 -0.62 0.32 -0.32
124 AT2G36060 MMS ZWEI homologue 3 MMS ZWEI homologue 3, UBIQUITIN E2
VARIANT 1C		 -0.61 0.3 -0.32
125 AT3G07440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G48530.1); Has 37 Blast hits
to 37 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.61 0.34 -0.33
126 AT3G60020 SKP1-like 5 SKP1-like 5, SKP1-like 5 -0.61 0.34 -0.3
127 AT3G22990 ARM repeat superfamily protein LEAF AND FLOWER RELATED -0.61 0.3 -0.3
128 AT4G24580 Rho GTPase activation protein (RhoGAP) with PH domain ROP1 ENHANCER 1 -0.61 0.36 -0.31
129 AT4G08930 APR-like 6 APR-like 6, APR-like 6 -0.61 0.33 -0.31
130 AT3G51910 heat shock transcription factor A7A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A7A, heat
shock transcription factor A7A		 -0.61 0.31 -0.34
131 AT3G46350 Leucine-rich repeat protein kinase family protein -0.61 0.33 -0.36
132 AT3G02580 sterol 1 BOULE 1, DWARF 7, sterol 1 -0.61 0.31 -0.31
133 AT5G28050 Cytidine/deoxycytidylate deaminase family protein -0.61 0.31 -0.3
134 AT5G38470 Rad23 UV excision repair protein family RADIATION SENSITIVE23D -0.61 0.32 -0.3
135 AT2G30930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane, membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G06540.1); Has 194 Blast hits to 176 proteins in
78 species: Archae - 0; Bacteria - 101; Metazoa - 15; Fungi
- 25; Plants - 12; Viruses - 4; Other Eukaryotes - 37
(source: NCBI BLink).		 -0.6 0.31 -0.33
136 AT4G24500 hydroxyproline-rich glycoprotein family protein -0.6 0.31 -0.31
137 AT2G14835 RING/U-box superfamily protein -0.6 0.31 -0.29
138 AT1G11270 F-box and associated interaction domains-containing protein -0.6 0.31 -0.32
139 AT1G34330 pseudogene, putative peroxidase, similar to anionic
peroxidase GI:559235 from (Petroselinum crispum); blastp
match of 35% identity and 2.3e-53 P-value to
GP|21426121|gb|AAM52318.1|AC105363_7|AC105363 Putative
peroxidase {Oryza sativa (japonica cultivar-group)}		 -0.6 0.32 -0.32
140 AT1G14940 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.6 0.32 -0.3
141 AT5G59290 UDP-glucuronic acid decarboxylase 3 ATUXS3, UDP-glucuronic acid
decarboxylase 3		 -0.6 0.31 -0.32
142 AT1G06760 winged-helix DNA-binding transcription factor family
protein		 -0.6 0.3 -0.32
143 AT1G65270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 13 growth stages; Has
149 Blast hits to 149 proteins in 49 species: Archae - 0;
Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 47; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 -0.6 0.32 -0.33
144 AT3G44570 Arabidopsis retrotransposon ORF-1 protein -0.6 0.32 -0.29
145 AT5G18220 O-Glycosyl hydrolases family 17 protein -0.6 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
146 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.77 0.48 -0.46 C0136