AGICode | AT2G18070 |
Description | unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G23170.2); Has 27 Blast hits to 27 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G18070 | unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G23170.2); Has 27 Blast hits to 27 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.32 | -0.3 | |||
2 | AT3G60570 | expansin B5 | expansin B5, ATHEXP BETA 1.3, expansin B5 |
0.66 | 0.33 | -0.33 | ||
3 | AT5G42170 | SGNH hydrolase-type esterase superfamily protein | 0.64 | 0.29 | -0.3 | |||
4 | AT1G10330 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.64 | 0.31 | -0.31 | |||
5 | AT5G16610 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.64 | 0.29 | -0.33 | |||
6 | AT3G61040 | cytochrome P450, family 76, subfamily C, polypeptide 7 | cytochrome P450, family 76, subfamily C, polypeptide 7 |
0.62 | 0.31 | -0.33 | ||
7 | AT3G21410 | F-box and associated interaction domains-containing protein | 0.61 | 0.31 | -0.31 | |||
8 | AT4G19470 | Leucine-rich repeat (LRR) family protein | 0.6 | 0.33 | -0.31 | |||
9 | AT3G47460 | Structural maintenance of chromosomes (SMC) family protein | ATSMC2 | 0.6 | 0.32 | -0.33 | ||
10 | AT5G09340 | Ubiquitin family protein | -0.59 | 0.3 | -0.32 | |||
11 | AT2G38060 | phosphate transporter 4;2 | phosphate transporter 4;2 | -0.59 | 0.31 | -0.33 | ||
12 | AT3G28610 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.58 | 0.31 | -0.31 | |||
13 | AT4G24540 | AGAMOUS-like 24 | AGAMOUS-like 24 | 0.57 | 0.34 | -0.3 | ||
14 | AT3G55020 | Ypt/Rab-GAP domain of gyp1p superfamily protein | 0.57 | 0.31 | -0.34 | |||
15 | AT5G01660 | CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). |
0.56 | 0.3 | -0.33 | |||
16 | AT1G52620 | Pentatricopeptide repeat (PPR) superfamily protein | 0.56 | 0.33 | -0.32 | |||
17 | AT5G46760 | Basic helix-loop-helix (bHLH) DNA-binding family protein | MYC3 | -0.55 | 0.3 | -0.32 | ||
18 | AT4G38120 | ARM repeat superfamily protein | 0.54 | 0.32 | -0.31 | |||
19 | AT2G17770 | basic region/leucine zipper motif 27 | basic region/leucine zipper motif 27, basic region/leucine zipper motif 27, FD PARALOG |
-0.53 | 0.31 | -0.31 | ||
20 | AT1G35490 | bZIP family transcription factor | -0.53 | 0.3 | -0.32 | |||
21 | AT5G35600 | histone deacetylase7 | histone deacetylase7 | 0.53 | 0.32 | -0.33 | ||
22 | AT2G11890 | adenylate cyclases | 0.53 | 0.32 | -0.3 | |||
23 | AT5G56480 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.53 | 0.33 | -0.31 | |||
24 | AT5G23780 | DOMAIN OF UNKNOWN FUNCTION 724 9 | DOMAIN OF UNKNOWN FUNCTION 724 9, DOMAIN OF UNKNOWN FUNCTION 724 9 |
-0.53 | 0.31 | -0.31 | ||
25 | AT5G43500 | actin-related protein 9 | actin-related protein 9, actin-related protein 9 |
0.53 | 0.32 | -0.3 | ||
26 | AT1G72080 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.52 | 0.33 | -0.3 | |||
27 | AT5G48990 | Galactose oxidase/kelch repeat superfamily protein | 0.52 | 0.32 | -0.31 | |||
28 | AT1G24030 | Protein kinase superfamily protein | -0.52 | 0.32 | -0.32 | |||
29 | AT3G14300 | pectinesterase family protein | A. THALIANA PECTIN METHYLESTERASE 26, ATPMEPCRC, PECTIN METHYLESTERASE 26 |
0.52 | 0.31 | -0.28 | ||
30 | AT1G60090 | beta glucosidase 4 | beta glucosidase 4 | 0.51 | 0.31 | -0.3 | ||
31 | AT5G64720 | Protein of unknown function (DUF1278) | 0.51 | 0.34 | -0.32 | |||
32 | AT5G53670 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.51 | 0.32 | -0.3 | |||
33 | AT3G30740 | 40S ribosomal protein S25 (RPS25C), pseudogene, similar to GB:P46301 GI:1173234 40S RIBOSOMAL PROTEIN S25 from (Lycopersicon esculentum); blastp match of 75% identity and 7.2e-09 P-value to SP|P46301|RS25_LYCES 40S ribosomal protein S25. (Tomato) {Lycopersicon esculentum} |
-0.5 | 0.32 | -0.32 | |||
34 | AT1G33080 | MATE efflux family protein | 0.5 | 0.31 | -0.31 | |||
35 | AT1G66630 | Protein with RING/U-box and TRAF-like domains | 0.5 | 0.33 | -0.3 | |||
36 | AT1G48730 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.5 | 0.29 | -0.33 | |||
37 | AT3G57370 | Cyclin family protein | -0.5 | 0.33 | -0.31 | |||
38 | AT1G22910 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.5 | 0.3 | -0.34 | |||
39 | AT1G22170 | Phosphoglycerate mutase family protein | -0.49 | 0.29 | -0.34 | |||
40 | AT5G03360 | DC1 domain-containing protein | -0.48 | 0.33 | -0.32 | |||
41 | AT5G54050 | Cysteine/Histidine-rich C1 domain family protein | -0.48 | 0.32 | -0.33 | |||
42 | AT4G32080 | unknown protein; Has 7 Blast hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.47 | 0.3 | -0.33 | |||
43 | AT4G03800 | transposable element gene | -0.46 | 0.31 | -0.3 | |||
44 | AT3G14630 | cytochrome P450, family 72, subfamily A, polypeptide 9 | cytochrome P450, family 72, subfamily A, polypeptide 9 |
-0.46 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
45 | C0068 | Citric acid | - | Citrate | acetyl-CoA biosynthesis (from citrate), TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), glutamine biosynthesis III, glyoxylate cycle |
-0.5 | 0.3 | -0.33 |