AT2G17950 : PGA6
Query Information
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AGICode AT2G17950
Description Homeodomain-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G17950 Homeodomain-like superfamily protein PGA6, WUSCHEL, WUSCHEL 1 1 0.3 -0.33
2 AT5G51760 Protein phosphatase 2C family protein ABA-hypersensitive germination 1 -0.67 0.32 -0.31
3 AT1G74620 RING/U-box superfamily protein -0.66 0.35 -0.3
4 AT5G56480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.32 -0.31
5 AT4G35987 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.65 0.3 -0.3
6 AT5G35930 AMP-dependent synthetase and ligase family protein -0.64 0.32 -0.32
7 AT2G24600 Ankyrin repeat family protein 0.64 0.31 -0.33
8 AT1G09950 RESPONSE TO ABA AND SALT 1 RESPONSE TO ABA AND SALT 1 0.62 0.32 -0.33
9 AT2G24000 serine carboxypeptidase-like 22 serine carboxypeptidase-like 22 0.61 0.29 -0.33
10 AT5G47970 Aldolase-type TIM barrel family protein -0.61 0.31 -0.31
11 ATCG00630 PSAJ PSAJ -0.6 0.31 -0.31
12 AT3G13226 regulatory protein RecX family protein -0.6 0.31 -0.33
13 AT3G21680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: root, flower,
stamen; EXPRESSED DURING: 4 anthesis, petal differentiation
and expansion stage; Has 34 Blast hits to 34 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.32 -0.31
14 AT5G18880 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 0.6 0.33 -0.33
15 AT2G32900 centromere/kinetochore protein, putative (ZW10) ATZW10 -0.59 0.32 -0.33
16 AT5G43710 Glycosyl hydrolase family 47 protein -0.59 0.32 -0.31
17 AT1G31600 RNA-binding (RRM/RBD/RNP motifs) family protein Arabidopsis thaliana tRNA
methyltransferase 9, tRNA
methyltransferase 9		 -0.59 0.33 -0.3
18 AT4G08650 transposable element gene -0.59 0.33 -0.31
19 AT1G17580 myosin 1 ARABIDOPSIS MYOSIN 1, myosin 1,
MYOSIN XI 1		 -0.59 0.33 -0.3
20 AT5G42640 C2H2 and C2HC zinc fingers superfamily protein 0.59 0.29 -0.32
21 AT4G19000 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS2 (FROM
YEAST INTERACTS WITH SPT6), IWS2		 -0.59 0.29 -0.3
22 AT3G42350 transposable element gene -0.58 0.31 -0.32
23 AT1G64130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.58 0.29 -0.28
24 AT2G24370 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.58 0.32 -0.33
25 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein 0.58 0.3 -0.3
26 AT5G66030 Golgi-localized GRIP domain-containing protein ATGRIP, GRIP -0.57 0.3 -0.3
27 AT1G73805 Calmodulin binding protein-like SAR Deficient 1 0.57 0.29 -0.32
28 AT2G19000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 71 Blast hits to
71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.3 -0.32
29 AT3G25450 transposable element gene -0.57 0.29 -0.31
30 AT3G60940 Putative endonuclease or glycosyl hydrolase -0.56 0.34 -0.3
31 AT4G04930 fatty acid desaturase family protein DES-1-LIKE -0.56 0.33 -0.31
32 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 -0.56 0.31 -0.31
33 AT3G12380 actin-related protein 5 actin-related protein 5,
ACTIN-RELATED PROTEIN 5		 -0.56 0.3 -0.32
34 AT1G04625 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.56 0.33 -0.34
35 AT3G10820 Transcription elongation factor (TFIIS) family protein 0.56 0.35 -0.31
36 AT3G19690 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.56 0.3 -0.36
37 AT3G18480 CCAAT-displacement protein alternatively spliced product CCAAT-displacement protein
alternatively spliced product,
CCAAT-displacement protein
alternatively spliced product		 -0.56 0.32 -0.31
38 AT1G35200 60S ribosomal protein L4/L1 (RPL4B), pseudogene, similar to
60S ribosomal protein L4 (fragment) GB:P49691 from
(Arabidopsis thaliana); blastp match of 50% identity and
6.3e-17 P-value to SP|Q9XF97|RL4_PRUAR 60S ribosomal
protein L4 (L1). (Apricot) {Prunus armeniaca}		 -0.56 0.3 -0.32
39 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24		 0.55 0.31 -0.31
40 AT3G23680 F-box associated ubiquitination effector family protein 0.55 0.31 -0.32
41 AT4G29650 Cytidine/deoxycytidylate deaminase family protein -0.55 0.32 -0.34
42 AT1G76430 phosphate transporter 1;9 phosphate transporter 1;9 -0.55 0.32 -0.33
43 AT2G48160 Tudor/PWWP/MBT domain-containing protein -0.55 0.31 -0.29
44 AT3G09220 laccase 7 laccase 7 0.55 0.32 -0.31
45 AT4G09140 MUTL-homologue 1 ARABIDOPSIS THALIANA
MUTL-HOMOLOGUE 1, MUTL-homologue 1		 -0.55 0.33 -0.3
46 AT5G60040 nuclear RNA polymerase C1 nuclear RNA polymerase C1 -0.55 0.32 -0.3
47 AT1G33760 Integrase-type DNA-binding superfamily protein 0.55 0.3 -0.31
48 AT1G04950 TATA BOX ASSOCIATED FACTOR II 59 ATTAF6, EMBRYO DEFECTIVE 2781,
TBP-associated factor 6, TATA BOX
ASSOCIATED FACTOR II 59		 -0.55 0.31 -0.32
49 AT5G15800 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 2, SEPALLATA1 -0.54 0.32 -0.3
50 AT4G02550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02210.2); Has 370 Blast hits
to 300 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 10; Plants - 354; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink).		 -0.54 0.33 -0.32
51 AT5G21150 Argonaute family protein ARGONAUTE 9 -0.54 0.31 -0.31
52 AT3G03510 Phototropic-responsive NPH3 family protein -0.54 0.3 -0.3
53 AT3G27410 unknown protein; Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.33 -0.35
54 AT1G62440 leucine-rich repeat/extensin 2 leucine-rich repeat/extensin 2 -0.54 0.31 -0.31
55 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.54 0.31 -0.31
56 AT2G04675 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.53 0.31 -0.32
57 AT3G10460 Plant self-incompatibility protein S1 family 0.53 0.32 -0.33
58 AT3G52610 unknown protein; Has 68 Blast hits to 67 proteins in 21
species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.53 0.3 -0.32
59 AT4G33290 F-box and associated interaction domains-containing protein -0.53 0.29 -0.33
60 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.53 0.34 -0.3
61 AT4G33330 plant glycogenin-like starch initiation protein 3 glucuronic acid substitution of
xylan 2, plant glycogenin-like
starch initiation protein 3		 0.53 0.32 -0.34
62 AT4G38560 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.53 0.3 -0.29
63 AT1G05450 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.53 0.32 -0.33
64 AT3G50180 Plant protein of unknown function (DUF247) 0.53 0.32 -0.29
65 AT1G07300 josephin protein-related 0.53 0.3 -0.29
66 AT1G79990 structural molecules -0.53 0.32 -0.3
67 AT2G20790 clathrin adaptor complexes medium subunit family protein -0.52 0.31 -0.34
68 AT5G03510 C2H2-type zinc finger family protein 0.52 0.33 -0.3
69 AT2G04380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.32 -0.32
70 AT1G50530 BEST Arabidopsis thaliana protein match is:
Calcium-dependent lipid-binding (CaLB domain) family
protein (TAIR:AT1G50570.2); Has 10 Blast hits to 10
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.52 0.29 -0.3
71 AT5G37110 transposable element gene -0.52 0.32 -0.31
72 AT1G30455 transcription regulators;translation initiation
factors;zinc ion binding;transcription activators		 0.52 0.3 -0.31
73 AT4G33480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3727 (InterPro:IPR022203);
Has 348 Blast hits to 348 proteins in 78 species: Archae -
0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 183;
Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).		 -0.52 0.31 -0.33
74 AT1G69630 F-box/RNI-like superfamily protein 0.52 0.33 -0.31
75 AT2G35360 ubiquitin family protein -0.52 0.32 -0.31
76 AT5G62990 Ubiquitin carboxyl-terminal hydrolase family protein embryo defective 1692 -0.51 0.3 -0.3
77 AT4G14810 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.51 0.31 -0.3
78 AT2G11680 transposable element gene 0.51 0.3 -0.33
79 AT1G07350 RNA-binding (RRM/RBD/RNP motifs) family protein serine/arginine rich-like protein
45a		 -0.51 0.3 -0.3
80 AT3G45860 cysteine-rich RLK (RECEPTOR-like protein kinase) 4 cysteine-rich RLK (RECEPTOR-like
protein kinase) 4		 0.51 0.31 -0.32
81 AT1G32300 D-arabinono-1,4-lactone oxidase family protein 0.5 0.3 -0.31
82 AT3G04370 plasmodesmata-located protein 4 plasmodesmata-located protein 4 0.5 0.32 -0.33
83 AT3G04800 translocase inner membrane subunit 23-3 translocase inner membrane subunit
23-3, translocase inner membrane
subunit 23-3		 0.5 0.32 -0.31
84 AT3G45870 nodulin MtN21 /EamA-like transporter family protein 0.5 0.32 -0.32
85 AT1G49930 BEST Arabidopsis thaliana protein match is: Alanyl-tRNA
synthetase, class IIc (TAIR:AT5G22800.1); Has 21 Blast hits
to 21 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.5 0.33 -0.3
86 AT4G36960 RNA-binding (RRM/RBD/RNP motifs) family protein -0.5 0.32 -0.3
87 AT1G41820 unknown protein; Has 46 Blast hits to 46 proteins in 21
species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 2;
Plants - 5; Viruses - 1; Other Eukaryotes - 24 (source:
NCBI BLink).		 0.5 0.32 -0.34
88 AT5G54220 Cysteine-rich protein -0.5 0.33 -0.31
89 AT4G17990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17700.1); Has 134 Blast hits
to 131 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.49 0.31 -0.31
90 AT5G35710 transposable element gene 0.49 0.32 -0.3
91 AT2G30680 BEST Arabidopsis thaliana protein match is: glucan
synthase-like 3 (TAIR:AT2G31960.2); Has 80 Blast hits to 80
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.48 0.31 -0.31
92 AT3G60170 transposable element gene 0.48 0.34 -0.32
93 AT5G48710 Ubiquitin-like superfamily protein 0.48 0.34 -0.33
94 AT4G17580 Bax inhibitor-1 family protein 0.48 0.31 -0.33
95 AT2G14700 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.48 0.33 -0.32
96 AT1G30860 RING/U-box superfamily protein 0.48 0.33 -0.31
97 AT5G47850 CRINKLY4 related 4 CRINKLY4 related 4 0.48 0.29 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		0.7 0.45 -0.45 C0228
99 C0145 Maltotetraose - Maltotetraose starch degradation II -0.7 0.46 -0.47 C0145
100 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		-0.63 0.46 -0.45 C0073
101 C0187 Neoeriocitrin - - - 0.62 0.45 -0.49