AGICode | AT2G14520 |
Description | CBS domain-containing protein with a domain of unknown function (DUF21) |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G14520 | CBS domain-containing protein with a domain of unknown function (DUF21) |
1 | 0.33 | -0.32 | |||
2 | AT1G03110 | Transducin/WD40 repeat-like superfamily protein | AtTRM82, tRNA modification 82 | -0.79 | 0.32 | -0.32 | ||
3 | AT1G65660 | Pre-mRNA splicing Prp18-interacting factor | SWELLMAP 1 | 0.78 | 0.3 | -0.32 | ||
4 | AT2G18480 | Major facilitator superfamily protein | 0.77 | 0.33 | -0.31 | |||
5 | AT5G07620 | Protein kinase superfamily protein | -0.77 | 0.31 | -0.33 | |||
6 | AT5G22850 | Eukaryotic aspartyl protease family protein | 0.77 | 0.3 | -0.32 | |||
7 | AT5G41970 | Metal-dependent protein hydrolase | -0.76 | 0.33 | -0.29 | |||
8 | AT4G18070 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.76 | 0.32 | -0.31 | |||
9 | AT3G26100 | Regulator of chromosome condensation (RCC1) family protein | 0.76 | 0.32 | -0.33 | |||
10 | AT1G28395 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.76 | 0.33 | -0.32 | |||
11 | AT1G08230 | Transmembrane amino acid transporter family protein | ATGAT1, L-GAMMA-AMINOBUTYRIC ACID TRANSPORTER 1 |
0.76 | 0.31 | -0.32 | ||
12 | AT3G02300 | Regulator of chromosome condensation (RCC1) family protein | 0.75 | 0.3 | -0.3 | |||
13 | AT5G61840 | Exostosin family protein | GUT1 | -0.75 | 0.3 | -0.33 | ||
14 | AT5G19570 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0546 (InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.75 | 0.31 | -0.32 | |||
15 | AT5G02880 | ubiquitin-protein ligase 4 | ubiquitin-protein ligase 4 | 0.75 | 0.32 | -0.3 | ||
16 | AT2G45710 | Zinc-binding ribosomal protein family protein | -0.74 | 0.3 | -0.32 | |||
17 | AT4G29410 | Ribosomal L28e protein family | -0.74 | 0.33 | -0.31 | |||
18 | AT3G01100 | hypothetical protein 1 | ARABIDOPSIS THALIANA HYPOTHETICAL PROTEIN 1, hypothetical protein 1 |
0.74 | 0.33 | -0.3 | ||
19 | AT2G20450 | Ribosomal protein L14 | -0.74 | 0.32 | -0.33 | |||
20 | AT2G36690 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.74 | 0.31 | -0.32 | |||
21 | AT3G51400 | Arabidopsis protein of unknown function (DUF241) | -0.74 | 0.31 | -0.32 | |||
22 | AT1G11320 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 46 Blast hits to 46 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.74 | 0.32 | -0.34 | |||
23 | AT3G11420 | Protein of unknown function (DUF604) | 0.74 | 0.29 | -0.32 | |||
24 | AT2G34570 | PIN domain-like family protein | maternal effect embryo arrest 21 | -0.73 | 0.31 | -0.32 | ||
25 | AT4G38060 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.73 | 0.31 | -0.32 | |||
26 | AT4G10450 | Ribosomal protein L6 family | -0.73 | 0.31 | -0.31 | |||
27 | AT3G12860 | NOP56-like pre RNA processing ribonucleoprotein | -0.73 | 0.33 | -0.32 | |||
28 | AT3G10610 | Ribosomal S17 family protein | -0.73 | 0.31 | -0.3 | |||
29 | AT3G19360 | Zinc finger (CCCH-type) family protein | -0.73 | 0.31 | -0.31 | |||
30 | AT2G19740 | Ribosomal protein L31e family protein | -0.73 | 0.32 | -0.32 | |||
31 | AT1G04480 | Ribosomal protein L14p/L23e family protein | -0.72 | 0.33 | -0.31 | |||
32 | AT1G72770 | homology to ABI1 | HYPERSENSITIVE TO ABA1 | 0.72 | 0.32 | -0.31 | ||
33 | AT5G09510 | Ribosomal protein S19 family protein | -0.72 | 0.31 | -0.31 | |||
34 | AT2G26890 | DNAJ heat shock N-terminal domain-containing protein | GRAVITROPISM DEFECTIVE 2, KATAMARI2 |
0.72 | 0.3 | -0.33 | ||
35 | AT1G54690 | gamma histone variant H2AX | GAMMA H2AX, gamma histone variant H2AX, H2AXB, histone H2A 3 |
-0.72 | 0.32 | -0.29 | ||
36 | AT1G18540 | Ribosomal protein L6 family protein | -0.72 | 0.34 | -0.32 | |||
37 | AT5G19510 | Translation elongation factor EF1B/ribosomal protein S6 family protein |
-0.72 | 0.33 | -0.3 | |||
38 | AT1G34760 | general regulatory factor 11 | GF14 OMICRON, general regulatory factor 11, ROOT HAIR SPECIFIC 5 |
-0.72 | 0.31 | -0.33 | ||
39 | AT1G01390 | UDP-Glycosyltransferase superfamily protein | -0.72 | 0.31 | -0.3 | |||
40 | AT4G22380 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | -0.72 | 0.33 | -0.28 | |||
41 | AT2G47610 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | -0.72 | 0.32 | -0.31 | |||
42 | AT1G54770 | Fcf2 pre-rRNA processing protein | -0.71 | 0.32 | -0.29 | |||
43 | AT3G05675 | BTB/POZ domain-containing protein | -0.71 | 0.33 | -0.33 | |||
44 | AT5G20160 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | -0.71 | 0.31 | -0.32 | |||
45 | AT3G10520 | haemoglobin 2 | haemoglobin 2, ARATH GLB2, ARABIDOPSIS HEMOGLOBIN 2, HEMOGLOBIN 2, haemoglobin 2, NON-SYMBIOTIC HAEMOGLOBIN 2 |
-0.71 | 0.32 | -0.35 | ||
46 | AT2G31725 | Eukaryotic protein of unknown function (DUF842) | -0.71 | 0.32 | -0.31 | |||
47 | AT4G27720 | Major facilitator superfamily protein | -0.71 | 0.3 | -0.32 | |||
48 | AT4G32770 | tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) |
SUCROSE EXPORT DEFECTIVE 1, VITAMIN E DEFICIENT 1 |
0.71 | 0.32 | -0.3 | ||
49 | AT5G64670 | Ribosomal protein L18e/L15 superfamily protein | -0.71 | 0.3 | -0.31 | |||
50 | AT5G18630 | alpha/beta-Hydrolases superfamily protein | 0.71 | 0.32 | -0.31 | |||
51 | AT1G22270 | Trm112p-like protein | -0.71 | 0.31 | -0.33 | |||
52 | AT1G20490 | AMP-dependent synthetase and ligase family protein | 0.7 | 0.31 | -0.33 | |||
53 | AT2G27720 | 60S acidic ribosomal protein family | -0.7 | 0.3 | -0.3 | |||
54 | AT1G05350 | NAD(P)-binding Rossmann-fold superfamily protein | -0.7 | 0.32 | -0.34 | |||
55 | AT1G08580 | unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.7 | 0.32 | -0.29 | |||
56 | AT1G78690 | Phospholipid/glycerol acyltransferase family protein | At1g78690p | -0.7 | 0.32 | -0.34 | ||
57 | AT4G23980 | auxin response factor 9 | auxin response factor 9 | 0.7 | 0.32 | -0.3 | ||
58 | AT1G70790 | Calcium-dependent lipid-binding (CaLB domain) family protein |
0.7 | 0.33 | -0.31 | |||
59 | AT3G61620 | 3'-5'-exoribonuclease family protein | RRP41 | -0.7 | 0.3 | -0.33 | ||
60 | AT4G35310 | calmodulin-domain protein kinase 5 | ATCPK5, calmodulin-domain protein kinase 5 |
-0.7 | 0.29 | -0.32 | ||
61 | AT3G19930 | sugar transporter 4 | SUGAR TRANSPORTER 4, sugar transporter 4 |
-0.7 | 0.3 | -0.31 | ||
62 | AT5G22650 | histone deacetylase 2B | ARABIDOPSIS HISTONE DEACETYLASE 2, ATHD2B, HISTONE DEACETYLASE 2, histone deacetylase 2B, HDA4, HDT02, HDT2 |
-0.7 | 0.32 | -0.32 | ||
63 | AT2G44510 | CDK inhibitor P21 binding protein | -0.7 | 0.32 | -0.32 | |||
64 | AT3G28270 | Protein of unknown function (DUF677) | 0.69 | 0.32 | -0.31 | |||
65 | AT3G57000 | nucleolar essential protein-related | -0.69 | 0.33 | -0.3 | |||
66 | AT2G21560 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39190.1); Has 3685 Blast hits to 2305 proteins in 270 species: Archae - 0; Bacteria - 156; Metazoa - 1145; Fungi - 322; Plants - 177; Viruses - 6; Other Eukaryotes - 1879 (source: NCBI BLink). |
0.69 | 0.32 | -0.33 | |||
67 | AT5G05570 | transducin family protein / WD-40 repeat family protein | 0.69 | 0.31 | -0.3 | |||
68 | AT2G28290 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
CHROMATIN REMODELING COMPLEX SUBUNIT R 3, SPLAYED |
0.69 | 0.32 | -0.32 | ||
69 | AT2G41840 | Ribosomal protein S5 family protein | -0.69 | 0.33 | -0.31 | |||
70 | AT5G22310 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.69 | 0.32 | -0.36 | |||
71 | AT1G13380 | Protein of unknown function (DUF1218) | -0.69 | 0.33 | -0.3 | |||
72 | AT3G46830 | RAB GTPase homolog A2C | ARABIDOPSIS RAB GTPASE HOMOLOG A2C, ATRAB11A, RAB GTPase homolog A2C, RAB GTPASE HOMOLOG A2C, RAB GTPase homolog A2C |
-0.69 | 0.32 | -0.33 | ||
73 | AT5G24350 | CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.68 | 0.33 | -0.31 | |||
74 | AT2G25670 | BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928 proteins in 1799 species: Archae - 86; Bacteria - 6347; Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses - 259; Other Eukaryotes - 13792 (source: NCBI BLink). |
-0.68 | 0.32 | -0.32 | |||
75 | AT1G51510 | RNA-binding (RRM/RBD/RNP motifs) family protein | Y14 | -0.68 | 0.31 | -0.3 | ||
76 | AT4G01990 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.68 | 0.29 | -0.32 | |||
77 | AT4G16265 | RNA polymerases M/15 Kd subunit | NRPB9B, NRPD9B, NRPE9B | -0.68 | 0.28 | -0.32 | ||
78 | AT4G34950 | Major facilitator superfamily protein | -0.68 | 0.31 | -0.34 | |||
79 | AT1G11240 | CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921; Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes - 933 (source: NCBI BLink). |
-0.68 | 0.31 | -0.32 | |||
80 | AT3G02560 | Ribosomal protein S7e family protein | -0.68 | 0.33 | -0.3 | |||
81 | AT2G19540 | Transducin family protein / WD-40 repeat family protein | -0.68 | 0.32 | -0.33 | |||
82 | AT2G02880 | mucin-related | -0.68 | 0.32 | -0.31 | |||
83 | AT1G09910 | Rhamnogalacturonate lyase family protein | 0.68 | 0.31 | -0.3 | |||
84 | AT2G38800 | Plant calmodulin-binding protein-related | 0.68 | 0.35 | -0.32 | |||
85 | AT1G76460 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.67 | 0.31 | -0.32 | |||
86 | AT2G22970 | serine carboxypeptidase-like 11 | serine carboxypeptidase-like 11 | 0.67 | 0.31 | -0.33 | ||
87 | AT3G10530 | Transducin/WD40 repeat-like superfamily protein | -0.67 | 0.33 | -0.3 | |||
88 | AT2G35060 | K+ uptake permease 11 | K+ uptake permease 11 | 0.67 | 0.32 | -0.32 | ||
89 | AT3G19450 | GroES-like zinc-binding alcohol dehydrogenase family protein |
ATCAD4, CAD, CAD-C, CINNAMYL ALCOHOL DEHYDROGENASE 4 |
-0.67 | 0.32 | -0.32 | ||
90 | AT2G18290 | anaphase promoting complex 10 | anaphase promoting complex 10, EMBRYO DEFECTIVE 2783 |
-0.67 | 0.31 | -0.32 | ||
91 | AT4G39280 | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative |
-0.67 | 0.32 | -0.31 | |||
92 | AT4G28320 | Glycosyl hydrolase superfamily protein | AtMAN5, endo-beta-mannase 5 | -0.67 | 0.3 | -0.31 | ||
93 | AT5G50330 | Protein kinase superfamily protein | 0.67 | 0.29 | -0.32 | |||
94 | AT2G26060 | Transducin/WD40 repeat-like superfamily protein | embryo defective 1345 | -0.67 | 0.31 | -0.33 | ||
95 | AT4G28440 | Nucleic acid-binding, OB-fold-like protein | -0.67 | 0.31 | -0.32 | |||
96 | AT5G05470 | eukaryotic translation initiation factor 2 alpha subunit | ATEIF2-A2, eukaryotic translation initiation factor 2 alpha subunit, EIF2-A2 |
-0.67 | 0.33 | -0.3 | ||
97 | AT3G18165 | modifier of snc1,4 | Modifier of snc1,4 | -0.67 | 0.33 | -0.31 | ||
98 | AT5G11630 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.67 | 0.32 | -0.3 | |||
99 | AT5G09250 | ssDNA-binding transcriptional regulator | KIWI | -0.67 | 0.29 | -0.29 | ||
100 | AT3G05060 | NOP56-like pre RNA processing ribonucleoprotein | -0.67 | 0.3 | -0.35 | |||
101 | AT1G26840 | origin recognition complex protein 6 | ARABIDOPSIS THALIANA ORIGIN RECOGNITION COMPLEX PROTEIN 6, origin recognition complex protein 6 |
-0.67 | 0.31 | -0.33 | ||
102 | AT4G38350 | Patched family protein | 0.66 | 0.32 | -0.34 | |||
103 | AT2G25790 | Leucine-rich receptor-like protein kinase family protein | 0.66 | 0.33 | -0.29 | |||
104 | AT3G20270 | lipid-binding serum glycoprotein family protein | 0.66 | 0.33 | -0.31 | |||
105 | AT1G32750 | HAC13 protein (HAC13) | GTD1, HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 13, HAF01, HISTONE ACETYLTRANSFERASE OF THE TAFII250 FAMILY 1, TBP-ASSOCIATED FACTOR 1 |
0.64 | 0.31 | -0.31 | ||
106 | AT3G21670 | Major facilitator superfamily protein | 0.64 | 0.3 | -0.3 | |||
107 | AT4G32850 | nuclear poly(a) polymerase | nuclear poly(a) polymerase, poly(A) polymerase IV |
0.64 | 0.3 | -0.3 | ||
108 | AT3G54290 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); Has 59 Blast hits to 59 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.64 | 0.3 | -0.31 | |||
109 | AT5G43600 | ureidoglycolate amidohydrolase | ARABIDOPSIS THALIANA ALLANTOATE AMIDOHYDROLASE 2, ureidoglycolate amidohydrolase |
0.64 | 0.33 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
110 | C0242 | Suberic acid | - | - | - | -0.69 | 0.43 | -0.43 |