AT2G14550 : -
Query Information
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AGICode AT2G14550
Description pseudogene, putative pre-mRNA splicing factor, non-consensus splice donor TA at exon 5; blastp match of 67% identity and 1.1e-68 P-value to GP|28374170|gb|AAH45264.1||BC045264 Similar to splicing factor 3b, subunit 4, 49kD {Xenopus laevis}
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G14550 pseudogene, putative pre-mRNA splicing factor,
non-consensus splice donor TA at exon 5; blastp match of
67% identity and 1.1e-68 P-value to
GP|28374170|gb|AAH45264.1||BC045264 Similar to splicing
factor 3b, subunit 4, 49kD {Xenopus laevis}		 1 0.29 -0.31
2 AT1G33240 GT-2-like 1 GT2-LIKE 1, GT-2-like 1 0.73 0.33 -0.31
3 AT3G17520 Late embryogenesis abundant protein (LEA) family protein -0.7 0.33 -0.32
4 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5		 -0.69 0.32 -0.3
5 AT2G19600 K+ efflux antiporter 4 K+ efflux antiporter 4, KEA4, K+
efflux antiporter 4		 -0.68 0.3 -0.32
6 AT3G30800 transposable element gene -0.67 0.33 -0.3
7 AT5G28210 mRNA capping enzyme family protein 0.67 0.32 -0.32
8 AT3G20570 early nodulin-like protein 9 AtENODL9, early nodulin-like
protein 9		 0.66 0.3 -0.33
9 AT1G05400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06810.1); Has 31 Blast hits
to 31 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.32 -0.33
10 AT3G26870 Plant self-incompatibility protein S1 family -0.66 0.32 -0.33
11 AT3G56600 Protein kinase superfamily protein 0.65 0.31 -0.31
12 AT1G20400 Protein of unknown function (DUF1204) 0.65 0.3 -0.34
13 AT2G15570 Thioredoxin superfamily protein ATHM3, Arabidopsis thioredoxin
M-type 3, GFP ARRESTED TRAFFICKING
1, THIOREDOXIN-M3		 0.65 0.29 -0.34
14 AT1G33400 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 9 -0.65 0.34 -0.33
15 AT5G20060 alpha/beta-Hydrolases superfamily protein 0.65 0.31 -0.32
16 AT1G30350 Pectin lyase-like superfamily protein -0.65 0.34 -0.3
17 AT3G55100 ABC-2 type transporter family protein ATP-binding cassette G17 0.65 0.31 -0.3
18 AT4G13380 Heavy metal transport/detoxification superfamily protein maternal effect embryo arrest 56 0.64 0.33 -0.35
19 AT3G06190 BTB-POZ and MATH domain 2 BTB-POZ AND MATH DOMAIN 2, BTB-POZ
and MATH domain 2		 0.64 0.31 -0.32
20 AT5G39700 myb domain protein 89 myb domain protein 89, myb domain
protein 89		 -0.64 0.3 -0.31
21 AT5G26620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits
to 48 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.3 -0.31
22 AT5G47150 YDG/SRA domain-containing protein 0.64 0.28 -0.33
23 AT2G17770 basic region/leucine zipper motif 27 basic region/leucine zipper motif
27, basic region/leucine zipper
motif 27, FD PARALOG		 0.63 0.31 -0.31
24 AT4G26170 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F
mature embryo stage, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 75 Blast hits to 42
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
2; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.63 0.34 -0.33
25 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 0.63 0.29 -0.3
26 AT3G50420 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.32 -0.31
27 AT5G51230 VEFS-Box of polycomb protein AtEMF2, CYR1, EMBRYONIC FLOWER 2,
CYTOKININ RESISTANT 1		 0.63 0.31 -0.32
28 AT5G65820 Pentatricopeptide repeat (PPR) superfamily protein -0.62 0.31 -0.31
29 AT1G26310 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 10, CAULIFLOWER, CAL1 0.62 0.3 -0.33
30 AT5G53670 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.3 -0.34
31 AT5G46200 Protein of Unknown Function (DUF239) 0.62 0.32 -0.3
32 AT2G11680 transposable element gene 0.62 0.3 -0.29
33 AT5G01150 Protein of unknown function (DUF674) 0.62 0.33 -0.32
34 AT4G34320 Protein of unknown function (DUF677) -0.62 0.29 -0.33
35 AT5G42230 serine carboxypeptidase-like 41 serine carboxypeptidase-like 41 -0.61 0.3 -0.33
36 AT2G05850 serine carboxypeptidase-like 38 serine carboxypeptidase-like 38 0.6 0.32 -0.3
37 AT4G26260 myo-inositol oxygenase 4 myo-inositol oxygenase 4 0.6 0.31 -0.31
38 AT4G02460 DNA mismatch repair protein, putative POSTMEIOTIC SEGREGATION 1 -0.6 0.33 -0.34
39 AT4G28380 Leucine-rich repeat (LRR) family protein 0.6 0.31 -0.32
40 AT4G27430 COP1-interacting protein 7 COP1-interacting protein 7 0.6 0.31 -0.32
41 AT3G07930 DNA glycosylase superfamily protein 0.6 0.31 -0.32
42 AT1G12530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits
to 53 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.33 -0.34
43 AT5G45540 Protein of unknown function (DUF594) 0.6 0.3 -0.31
44 AT5G18220 O-Glycosyl hydrolases family 17 protein 0.6 0.34 -0.31
45 AT3G16970 Plant self-incompatibility protein S1 family 0.59 0.33 -0.33
46 AT5G50480 nuclear factor Y, subunit C6 nuclear factor Y, subunit C6 -0.59 0.29 -0.33
47 AT1G16970 KU70 homolog ARABIDOPSIS THALIANA KU70 HOMOLOG,
KU70 homolog		 -0.59 0.3 -0.32
48 AT5G05480 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
protein		 -0.59 0.3 -0.3
49 AT3G45330 Concanavalin A-like lectin protein kinase family protein 0.59 0.33 -0.32
50 AT1G50700 calcium-dependent protein kinase 33 calcium-dependent protein kinase
33		 -0.59 0.31 -0.32
51 AT2G19180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits
to 64 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.34 -0.32
52 AT4G32630 ArfGap/RecO-like zinc finger domain-containing protein 0.59 0.34 -0.3
53 AT4G14815 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.59 0.33 -0.31
54 AT5G54220 Cysteine-rich protein -0.59 0.3 -0.32
55 AT4G03770 transposable element gene 0.58 0.3 -0.33
56 AT1G47885 Ribonuclease inhibitor -0.58 0.34 -0.31
57 AT1G14110 fucosyltransferase 9 ATFUT9, fucosyltransferase 9 -0.58 0.3 -0.33
58 AT2G36710 Pectin lyase-like superfamily protein 0.58 0.3 -0.3
59 AT1G65810 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.58 0.31 -0.33
60 AT5G07430 Pectin lyase-like superfamily protein 0.58 0.29 -0.31
61 AT1G51910 Leucine-rich repeat protein kinase family protein 0.58 0.31 -0.31
62 AT3G30190 transposable element gene -0.57 0.34 -0.32
63 AT4G07890 transposable element gene 0.57 0.31 -0.33
64 AT4G08340 transposable element gene 0.57 0.33 -0.3
65 AT2G26470 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF159 (InterPro:IPR003738); Has 3646
Blast hits to 3636 proteins in 1001 species: Archae - 41;
Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44;
Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink).		 -0.57 0.32 -0.32
66 AT1G47790 F-box and associated interaction domains-containing protein 0.57 0.32 -0.31
67 AT5G45050 Disease resistance protein (TIR-NBS-LRR class) ATWRKY16, TOLERANT TO TOBACCO
RINGSPOT NEPOVIRUS 1, WRKY16		 0.57 0.33 -0.31
68 AT1G32650 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.57 0.33 -0.34
69 AT4G21730 pseudogene of N-ethylmaleimide sensitive factor (NSF) -0.57 0.28 -0.33
70 AT4G39590 Galactose oxidase/kelch repeat superfamily protein 0.56 0.32 -0.31
71 AT1G42630 transposable element gene 0.56 0.29 -0.33
72 AT4G13320 unknown protein; Has 68 Blast hits to 67 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.56 0.31 -0.32
73 AT2G14950 transposable element gene 0.56 0.3 -0.32
74 AT2G22180 hydroxyproline-rich glycoprotein family protein 0.56 0.33 -0.32
75 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 -0.56 0.31 -0.32
76 AT3G32110 transposable element gene -0.56 0.29 -0.32
77 AT2G28960 Leucine-rich repeat protein kinase family protein 0.56 0.31 -0.31
78 AT5G65370 ENTH/ANTH/VHS superfamily protein 0.56 0.32 -0.33
79 AT4G27580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, cell wall; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 6 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.56 0.34 -0.31
80 AT5G62500 end binding protein 1B ATEB1, END BINDING PROTEIN 1B, end
binding protein 1B		 0.56 0.31 -0.32
81 AT3G45390 Concanavalin A-like lectin protein kinase family protein 0.56 0.33 -0.33
82 AT2G10050 transposable element gene -0.56 0.32 -0.32
83 AT5G28560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; Has 0 Blast hits to 0 proteins in 0 species
(source: NCBI BLink).		 0.56 0.31 -0.3
84 AT3G47230 transposable element gene 0.55 0.31 -0.32
85 AT4G04370 Tetratricopeptide repeat (TPR)-like superfamily protein 0.55 0.31 -0.3
86 AT5G55720 Pectin lyase-like superfamily protein 0.55 0.3 -0.33
87 AT1G32930 Galactosyltransferase family protein -0.55 0.29 -0.32
88 AT2G19150 Pectin lyase-like superfamily protein 0.55 0.32 -0.32
89 AT1G34280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.31 -0.33
90 AT1G05040 BEST Arabidopsis thaliana protein match is:
Ubiquitin-associated (UBA) protein (TAIR:AT2G33010.1); Has
14 Blast hits to 12 proteins in 3 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.3 -0.32
91 AT3G24250 glycine-rich protein 0.55 0.31 -0.33
92 AT4G14840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22520.1); Has 1681 Blast hits
to 1532 proteins in 283 species: Archae - 19; Bacteria -
179; Metazoa - 579; Fungi - 131; Plants - 223; Viruses - 5;
Other Eukaryotes - 545 (source: NCBI BLink).		 -0.54 0.31 -0.31
93 AT1G13680 PLC-like phosphodiesterases superfamily protein -0.54 0.34 -0.31
94 AT2G04710 transposable element gene -0.54 0.3 -0.31
95 AT2G13500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41590.1); Has 126 Blast hits
to 126 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.31 -0.33
96 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 -0.54 0.35 -0.31
97 AT1G77860 Rhomboid-related intramembrane serine protease family
protein		 KOMPEITO -0.53 0.31 -0.31
98 AT2G44710 RNA-binding (RRM/RBD/RNP motifs) family protein -0.53 0.32 -0.33
99 AT5G55560 Protein kinase superfamily protein -0.53 0.31 -0.3
100 AT2G28240 ATP-dependent helicase family protein -0.53 0.33 -0.33
101 AT5G22540 Plant protein of unknown function (DUF247) -0.53 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
102 C0181 MST_2904.3 - - - 0.72 0.48 -0.44
103 C0132 Kaempferol-3-O-rutinoside - - - -0.68 0.47 -0.47