AT2G25660 : embryo defective 2410
Query Information
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AGICode AT2G25660
Description embryo defective 2410
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G25660 embryo defective 2410 embryo defective 2410 1 0.32 -0.31
2 AT2G36810 ARM repeat superfamily protein 0.72 0.34 -0.32
3 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5		 0.72 0.32 -0.32
4 AT4G38180 FAR1-related sequence 5 FAR1-related sequence 5 0.71 0.34 -0.3
5 AT3G10810 zinc finger (C3HC4-type RING finger) family protein 0.71 0.3 -0.29
6 AT4G34040 RING/U-box superfamily protein 0.71 0.33 -0.31
7 AT2G48160 Tudor/PWWP/MBT domain-containing protein 0.71 0.31 -0.32
8 AT1G63690 SIGNAL PEPTIDE PEPTIDASE-LIKE 2 SIGNAL PEPTIDE PEPTIDASE-LIKE 2,
SIGNAL PEPTIDE PEPTIDASE-LIKE 2		 0.71 0.35 -0.33
9 AT1G01320 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.31 -0.3
10 AT5G27970 ARM repeat superfamily protein 0.7 0.32 -0.32
11 AT2G46020 transcription regulatory protein SNF2, putative ARABIDOPSIS THALIANA BRAHMA,
BRAHMA, CHA2, CHROMATIN REMODELING
2		 0.7 0.3 -0.31
12 AT3G63180 TIC-like TICKLE, TIC-like 0.7 0.31 -0.31
13 AT1G68720 tRNA arginine adenosine deaminase ARABIDOPSIS THALIANA TRNA
ADENOSINE DEAMINASE A, tRNA
arginine adenosine deaminase		 0.69 0.31 -0.3
14 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 0.69 0.32 -0.31
15 AT5G65930 kinesin-like calmodulin-binding protein (ZWICHEL) KINESIN-LIKE CALMODULIN-BINDING
PROTEIN, POTATO KINESIN-LIKE
CALMODULIN-BINDING PROTEIN,
ZWICHEL		 0.69 0.32 -0.29
16 AT1G55350 calpain-type cysteine protease family ATDEK1, DEFECTIVE KERNEL 1, embryo
defective 1275, EMBRYO DEFECTIVE
80		 0.68 0.31 -0.31
17 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.68 0.31 -0.3
18 AT1G21650 Preprotein translocase SecA family protein SECA2 0.68 0.33 -0.31
19 AT1G22510 RING/U-box protein with domain of unknown function (DUF
1232)		 -0.67 0.32 -0.33
20 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.67 0.32 -0.29
21 AT1G24290 AAA-type ATPase family protein 0.67 0.32 -0.31
22 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.66 0.33 -0.33
23 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.66 0.33 -0.29
24 AT1G03280 Transcription factor TFIIE, alpha subunit 0.66 0.3 -0.3
25 AT1G61620 phosphoinositide binding -0.66 0.3 -0.29
26 AT4G11510 ralf-like 28 ralf-like 28 0.65 0.31 -0.33
27 AT1G64170 cation/H+ exchanger 16 cation/H+ exchanger 16, cation/H+
exchanger 16		 -0.65 0.33 -0.32
28 AT2G07360 SH3 domain-containing protein 0.65 0.3 -0.35
29 AT1G34080 transposable element gene 0.65 0.33 -0.29
30 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 -0.65 0.3 -0.29
31 AT5G57220 cytochrome P450, family 81, subfamily F, polypeptide 2 cytochrome P450, family 81,
subfamily F, polypeptide 2		 -0.65 0.33 -0.31
32 AT2G20190 CLIP-associated protein CLIP-ASSOCIATED PROTEIN,
CLIP-associated protein		 0.65 0.31 -0.34
33 AT5G40970 Protein of unknown function (DUF 3339) 0.64 0.32 -0.33
34 AT4G23490 Protein of unknown function (DUF604) 0.64 0.29 -0.31
35 AT1G63640 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 0.64 0.32 -0.3
36 AT5G15240 Transmembrane amino acid transporter family protein 0.64 0.3 -0.33
37 AT4G03205 Coproporphyrinogen III oxidase hemf2 0.64 0.3 -0.34
38 AT1G70520 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 ALTERED SEED GERMINATION 6,
cysteine-rich RLK (RECEPTOR-like
protein kinase) 2		 -0.64 0.32 -0.32
39 AT3G54280 DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA binding;helicases		 ATBTAF1, BTAF1, CHA16, CHR16, ROOT
GROWTH DEFECTIVE 3		 0.64 0.3 -0.31
40 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.63 0.32 -0.32
41 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.63 0.33 -0.34
42 AT1G31810 Formin Homology 14 Formin Homology 14 0.63 0.29 -0.33
43 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.63 0.31 -0.32
44 AT1G67140 HEAT repeat-containing protein SWEETIE 0.63 0.29 -0.31
45 AT2G36090 F-box family protein -0.63 0.32 -0.32
46 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 0.63 0.32 -0.33
47 ATCG00540 photosynthetic electron transfer A photosynthetic electron transfer A 0.63 0.31 -0.33
48 AT4G16280 RNA binding;abscisic acid binding FCA 0.62 0.31 -0.32
49 AT1G33070 MADS-box family protein 0.62 0.29 -0.32
50 AT2G37050 Leucine-rich repeat protein kinase family protein 0.62 0.3 -0.3
51 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG 0.62 0.3 -0.3
52 AT5G56320 expansin A14 ATEXP14, expansin A14, ATHEXP
ALPHA 1.5, EXPANSIN 14, expansin
A14		 -0.62 0.32 -0.33
53 AT2G02780 Leucine-rich repeat protein kinase family protein 0.61 0.31 -0.33
54 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 0.61 0.32 -0.34
55 AT1G58230 binding 0.61 0.31 -0.31
56 AT4G37740 growth-regulating factor 2 growth-regulating factor 2,
growth-regulating factor 2		 0.61 0.33 -0.34
57 AT1G22860 Vacuolar sorting protein 39 0.61 0.32 -0.31
58 AT3G48490 unknown protein; Has 16 Blast hits to 16 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.31
59 AT2G45540 WD-40 repeat family protein / beige-related 0.6 0.34 -0.31
60 AT5G27150 Na+/H+ exchanger 1 AT-NHX1, ATNHX, ATNHX1, Na+/H+
exchanger 1		 0.6 0.32 -0.31
61 AT5G22750 DNA/RNA helicase protein RAD5, RAD5A 0.6 0.3 -0.33
62 AT1G03000 peroxin 6 peroxin 6 0.6 0.3 -0.31
63 AT4G32551 LisH dimerisation motif;WD40/YVTN repeat-like-containing
domain		 LEUNIG, ROTUNDA 2 0.6 0.31 -0.32
64 AT1G55970 histone acetyltransferase of the CBP family 4 HAC04, histone acetyltransferase
of the CBP family 4, HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 6, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 04, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 4		 0.6 0.33 -0.32
65 AT4G03390 STRUBBELIG-receptor family 3 STRUBBELIG-receptor family 3 0.6 0.34 -0.32
66 AT4G14365 XB3 ortholog 4 in Arabidopsis thaliana XB3 ortholog 4 in Arabidopsis
thaliana		 -0.6 0.31 -0.3
67 AT1G13910 Leucine-rich repeat (LRR) family protein 0.6 0.33 -0.32
68 AT1G11790 arogenate dehydratase 1 arogenate dehydratase 1,
Arabidopsis thaliana arogenate
dehydratase 1		 0.59 0.33 -0.29
69 AT1G33540 serine carboxypeptidase-like 18 serine carboxypeptidase-like 18 -0.59 0.32 -0.3
70 AT5G55670 RNA-binding (RRM/RBD/RNP motifs) family protein 0.59 0.32 -0.34
71 AT1G63700 Protein kinase superfamily protein EMBRYO DEFECTIVE 71, MAP KINASE
KINASE KINASE 4, YODA		 0.59 0.31 -0.31
72 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.31 -0.31
73 AT4G00760 pseudo-response regulator 8 pseudo-response regulator 8,
PSEUDO-RESPONSE REGULATOR 8		 0.59 0.32 -0.33
74 AT3G04800 translocase inner membrane subunit 23-3 translocase inner membrane subunit
23-3, translocase inner membrane
subunit 23-3		 -0.59 0.32 -0.32
75 AT2G35630 ARM repeat superfamily protein GEM1, MICROTUBULE ORGANIZATION 1 0.59 0.31 -0.33
76 AT5G60950 COBRA-like protein 5 precursor COBRA-like protein 5 precursor -0.58 0.32 -0.31
77 AT1G35970 transposable element gene 0.58 0.31 -0.31
78 AT1G72060 serine-type endopeptidase inhibitors -0.58 0.3 -0.31
79 AT4G24980 nodulin MtN21 /EamA-like transporter family protein 0.58 0.31 -0.29
80 AT2G20620 Protein of unknown function (DUF626) -0.58 0.28 -0.33
81 AT1G68750 phosphoenolpyruvate carboxylase 4 phosphoenolpyruvate carboxylase 4,
phosphoenolpyruvate carboxylase 4		 0.58 0.33 -0.31
82 AT4G39560 Galactose oxidase/kelch repeat superfamily protein 0.58 0.32 -0.34
83 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.58 0.32 -0.33
84 AT1G52200 PLAC8 family protein -0.58 0.32 -0.32
85 AT1G27370 squamosa promoter binding protein-like 10 squamosa promoter binding
protein-like 10		 0.58 0.32 -0.32
86 AT4G14410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 104 -0.58 0.32 -0.3
87 AT3G22060 Receptor-like protein kinase-related family protein -0.58 0.32 -0.32
88 AT5G03970 F-box associated ubiquitination effector family protein -0.57 0.32 -0.32
89 AT3G30440 transposable element gene -0.57 0.31 -0.32
90 AT2G43620 Chitinase family protein -0.57 0.32 -0.31
91 AT4G24240 WRKY DNA-binding protein 7 ATWRKY7, WRKY DNA-binding protein
7		 -0.57 0.33 -0.3
92 AT4G07580 transposable element gene -0.57 0.32 -0.34
93 AT3G28380 P-glycoprotein 17 ATP-binding cassette B17,
P-glycoprotein 17		 -0.56 0.31 -0.29
94 AT5G07570 glycine/proline-rich protein -0.56 0.3 -0.31
95 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.56 0.3 -0.32
96 AT3G09520 exocyst subunit exo70 family protein H4 exocyst subunit exo70 family
protein H4, exocyst subunit exo70
family protein H4		 -0.56 0.3 -0.31
97 AT1G29860 WRKY DNA-binding protein 71 WRKY DNA-BINDING PROTEIN 71, WRKY
DNA-binding protein 71		 -0.56 0.31 -0.32
98 AT2G20142 Toll-Interleukin-Resistance (TIR) domain family protein -0.56 0.34 -0.3
99 AT3G48090 alpha/beta-Hydrolases superfamily protein ATEDS1, enhanced disease
susceptibility 1		 -0.55 0.32 -0.34
100 AT2G24600 Ankyrin repeat family protein -0.55 0.35 -0.32
101 AT2G24000 serine carboxypeptidase-like 22 serine carboxypeptidase-like 22 -0.55 0.31 -0.28
102 AT3G45710 Major facilitator superfamily protein -0.55 0.3 -0.31
103 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 -0.55 0.32 -0.32
104 AT3G58600 Adaptin ear-binding coat-associated protein 1 NECAP-1 -0.54 0.34 -0.32
105 AT2G17740 Cysteine/Histidine-rich C1 domain family protein -0.54 0.32 -0.34
106 AT1G33990 methyl esterase 14 METHYL ESTERASE 14, methyl
esterase 14		 -0.54 0.33 -0.31
107 AT3G03290 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.54 0.35 -0.32
108 AT4G23810 WRKY family transcription factor ATWRKY53, WRKY53 -0.53 0.32 -0.32
109 AT1G55390 Cysteine/Histidine-rich C1 domain family protein -0.53 0.31 -0.32
110 AT4G01740 Cysteine/Histidine-rich C1 domain family protein -0.53 0.28 -0.32
111 AT1G64030 serpin 3 ATSRP3, serpin 3 -0.53 0.31 -0.3
112 AT5G66640 DA1-related protein 3 DA1-related protein 3 -0.53 0.33 -0.31
113 AT5G52750 Heavy metal transport/detoxification superfamily protein -0.52 0.3 -0.31
114 AT4G03600 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.52 0.29 -0.3
115 AT3G30330 transposable element gene -0.52 0.32 -0.3
116 AT1G03700 Uncharacterised protein family (UPF0497) -0.52 0.29 -0.33
117 AT5G64870 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 -0.52 0.33 -0.34
118 AT2G47300 ribonuclease Ps -0.52 0.31 -0.31
119 AT3G01290 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 AtHIR2, hypersensitive induced
reaction 2		 -0.52 0.35 -0.32
120 AT1G24420 HXXXD-type acyl-transferase family protein -0.51 0.32 -0.32
121 AT4G22430 F-box family protein -0.51 0.32 -0.34
122 AT1G26700 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 14,
MILDEW RESISTANCE LOCUS O 14		 -0.51 0.29 -0.33
123 AT4G23610 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.51 0.31 -0.33
124 AT5G39020 Malectin/receptor-like protein kinase family protein -0.51 0.32 -0.31