AGICode | AT2G25565 |
Description | BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT2G24480.1); Has 27 Blast hits to 27 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G25565 | BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT2G24480.1); Has 27 Blast hits to 27 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.32 | -0.31 | |||
2 | AT5G01610 | Protein of unknown function, DUF538 | -0.58 | 0.32 | -0.33 | |||
3 | AT1G01780 | GATA type zinc finger transcription factor family protein | PLIM2b | -0.58 | 0.29 | -0.31 | ||
4 | AT4G29450 | Leucine-rich repeat protein kinase family protein | -0.58 | 0.3 | -0.3 | |||
5 | AT4G33600 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33590.1); Has 131 Blast hits to 131 proteins in 40 species: Archae - 0; Bacteria - 9; Metazoa - 12; Fungi - 24; Plants - 58; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). |
-0.55 | 0.31 | -0.3 | |||
6 | AT5G54790 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.31 | -0.3 | |||
7 | AT1G67990 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
TAPETUM-SPECIFIC METHYLTRANSFERASE 1, TSM1 |
0.53 | 0.33 | -0.3 | ||
8 | AT3G05080 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.32 | -0.31 | |||
9 | AT5G15420 | unknown protein; Has 17 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). |
-0.53 | 0.31 | -0.3 | |||
10 | AT3G45740 | hydrolase family protein / HAD-superfamily protein | -0.52 | 0.31 | -0.29 | |||
11 | AT4G09990 | Protein of unknown function (DUF579) | -0.51 | 0.34 | -0.33 | |||
12 | AT4G29640 | Cytidine/deoxycytidylate deaminase family protein | 0.51 | 0.34 | -0.33 | |||
13 | AT1G30140 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
-0.5 | 0.33 | -0.33 | |||
14 | AT3G05580 | Calcineurin-like metallo-phosphoesterase superfamily protein |
type one protein phosphatase 9 | -0.5 | 0.31 | -0.31 | ||
15 | AT5G26080 | proline-rich family protein | -0.49 | 0.32 | -0.3 | |||
16 | AT2G33000 | ubiquitin-associated (UBA)/TS-N domain-containing protein-related |
0.49 | 0.32 | -0.32 | |||
17 | AT4G04730 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, pedicel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G13500.1); Has 49 Blast hits to 49 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.49 | 0.31 | -0.29 | |||
18 | AT3G13782 | nucleosome assembly protein1;4 | nucleosome assembly protein1;4, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 04, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 4 |
-0.49 | 0.31 | -0.3 | ||
19 | AT1G18950 | DDT domain superfamily | -0.49 | 0.28 | -0.3 | |||
20 | AT3G54580 | Proline-rich extensin-like family protein | -0.49 | 0.33 | -0.31 | |||
21 | AT4G34250 | 3-ketoacyl-CoA synthase 16 | 3-ketoacyl-CoA synthase 16 | 0.49 | 0.31 | -0.32 | ||
22 | AT1G62860 | pseudogene of pentatricopeptide (PPR) repeat-containing protein |
-0.48 | 0.33 | -0.33 | |||
23 | AT2G20660 | ralf-like 14 | ralf-like 14 | 0.47 | 0.33 | -0.32 | ||
24 | AT1G20760 | Calcium-binding EF hand family protein | -0.47 | 0.31 | -0.32 | |||
25 | AT1G70880 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.47 | 0.3 | -0.31 | |||
26 | AT1G75600 | Histone superfamily protein | 0.46 | 0.32 | -0.31 | |||
27 | AT2G18080 | Serine carboxypeptidase S28 family protein | embryo sac development arrest 2 | 0.46 | 0.32 | -0.32 | ||
28 | AT3G05610 | Plant invertase/pectin methylesterase inhibitor superfamily | 0.45 | 0.32 | -0.31 | |||
29 | AT2G36180 | EF hand calcium-binding protein family | 0.45 | 0.3 | -0.3 | |||
30 | AT1G33710 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein |
-0.45 | 0.31 | -0.31 | |||
31 | AT2G07290 | unknown protein; Has 8 Blast hits to 8 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.44 | 0.32 | -0.32 | |||
32 | AT2G46190 | Mitochondrial glycoprotein family protein | 0.43 | 0.31 | -0.3 | |||
33 | AT5G24820 | Eukaryotic aspartyl protease family protein | 0.43 | 0.32 | -0.29 | |||
34 | AT2G44240 | Protein of Unknown Function (DUF239) | 0.43 | 0.31 | -0.31 | |||
35 | AT2G13900 | Cysteine/Histidine-rich C1 domain family protein | -0.42 | 0.31 | -0.3 | |||
36 | AT1G06020 | pfkB-like carbohydrate kinase family protein | -0.42 | 0.3 | -0.31 | |||
37 | AT4G00350 | MATE efflux family protein | 0.41 | 0.3 | -0.31 |