AT3G31920 : -
Query Information
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AGICode AT3G31920
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G31920 transposable element gene 1 0.3 -0.33
2 AT4G10260 pfkB-like carbohydrate kinase family protein 0.82 0.32 -0.28
3 AT5G42170 SGNH hydrolase-type esterase superfamily protein 0.76 0.31 -0.32
4 AT1G43790 tracheary element differentiation-related 6 tracheary element
differentiation-related 6		 -0.76 0.33 -0.31
5 AT2G34400 Pentatricopeptide repeat (PPR-like) superfamily protein 0.76 0.32 -0.32
6 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12		 0.75 0.34 -0.35
7 AT4G09100 RING/U-box superfamily protein 0.75 0.32 -0.32
8 AT2G44260 Plant protein of unknown function (DUF946) -0.75 0.31 -0.33
9 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family 0.75 0.33 -0.34
10 AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.31 -0.29
11 AT5G57720 AP2/B3-like transcriptional factor family protein 0.74 0.31 -0.31
12 AT2G35550 basic pentacysteine 7 BASIC PENTACYSTEINE 7, BBR, basic
pentacysteine 7		 0.74 0.31 -0.31
13 AT3G15490 Regulator of Vps4 activity in the MVB pathway protein 0.73 0.32 -0.32
14 AT3G51680 NAD(P)-binding Rossmann-fold superfamily protein AtSDR2, short-chain
dehydrogenase/reductase 2		 0.73 0.3 -0.29
15 AT5G24130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, flower;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.73 0.31 -0.3
16 AT5G24230 Lipase class 3-related protein 0.73 0.31 -0.32
17 AT4G32750 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.73 0.3 -0.34
18 AT3G01380 transferases;sulfuric ester
hydrolases;catalytics;transferases		 0.73 0.29 -0.3
19 AT3G21550 DUF679 domain membrane protein 2 Arabidopsis thaliana DUF679 domain
membrane protein 2, DUF679 domain
membrane protein 2		 -0.72 0.31 -0.34
20 AT1G05550 Protein of unknown function (DUF295) 0.71 0.32 -0.31
21 AT1G47350 F-box associated ubiquitination effector family protein -0.71 0.32 -0.3
22 AT2G21470 SUMO-activating enzyme 2 SUMO-ACTIVATING ENZYME 2, EMBRYO
DEFECTIVE 2764, SUMO-activating
enzyme 2		 0.71 0.31 -0.31
23 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 -0.71 0.31 -0.32
24 AT1G43260 hAT transposon superfamily protein 0.71 0.3 -0.33
25 AT1G75430 BEL1-like homeodomain 11 BEL1-like homeodomain 11 0.71 0.31 -0.32
26 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.7 0.31 -0.32
27 AT3G48900 single-stranded DNA endonuclease family protein 0.7 0.32 -0.31
28 AT5G13380 Auxin-responsive GH3 family protein 0.7 0.34 -0.3
29 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.7 0.32 -0.31
30 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 0.7 0.32 -0.34
31 AT4G15730 CW-type Zinc Finger 0.7 0.32 -0.29
32 AT2G11150 transposable element gene 0.7 0.32 -0.31
33 AT3G43120 SAUR-like auxin-responsive protein family 0.7 0.29 -0.32
34 AT5G40280 Prenyltransferase family protein ARABIDOPSIS THALIANA FARNESYL
TRANSFERASE BETA SUBUNIT, ENHANCED
RESPONSE TO ABA 1, WIGGUM		 -0.69 0.33 -0.32
35 AT3G05960 sugar transporter 6 SUGAR TRANSPORTER 6, sugar
transporter 6		 0.69 0.31 -0.32
36 AT5G59680 Leucine-rich repeat protein kinase family protein 0.69 0.33 -0.31
37 AT3G42100 transposable element gene 0.68 0.34 -0.31
38 AT5G37620 Cysteine/Histidine-rich C1 domain family protein 0.68 0.33 -0.32
39 AT5G54950 Aconitase family protein 0.68 0.29 -0.31
40 AT5G54790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.32 -0.33
41 AT5G38260 Protein kinase superfamily protein 0.68 0.3 -0.31
42 AT3G11040 Glycosyl hydrolase family 85 AtENGase85B,
Endo-beta-N-acetyglucosaminidase
85B		 0.68 0.32 -0.32
43 AT3G21180 autoinhibited Ca(2+)-ATPase 9 autoinhibited Ca(2+)-ATPase 9,
ATACA9		 0.68 0.3 -0.31
44 AT2G13550 unknown protein; Has 23 Blast hits to 20 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 0.68 0.32 -0.32
45 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.33 -0.33
46 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 0.67 0.31 -0.33
47 AT1G26860 transposable element gene -0.67 0.32 -0.33
48 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.28 -0.33
49 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.31 -0.31
50 AT1G62914 pentatricopeptide (PPR) repeat-containing protein 0.67 0.3 -0.31
51 AT4G38120 ARM repeat superfamily protein 0.67 0.31 -0.31
52 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.66 0.32 -0.33
53 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 0.66 0.32 -0.33
54 AT2G16970 Major facilitator superfamily protein maternal effect embryo arrest 15 0.66 0.31 -0.32
55 AT1G07980 nuclear factor Y, subunit C10 nuclear factor Y, subunit C10 -0.66 0.31 -0.32
56 AT1G46912 F-box associated ubiquitination effector family protein 0.66 0.33 -0.33
57 AT3G26614 transposable element gene 0.66 0.31 -0.31
58 AT5G37420 Family of unknown function (DUF577) 0.66 0.31 -0.31
59 AT5G28590 DNA-binding family protein 0.66 0.31 -0.32
60 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.66 0.31 -0.32
61 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 -0.66 0.32 -0.33
62 AT1G43886 transposable element gene -0.65 0.31 -0.34
63 AT5G55650 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.32 -0.31
64 AT1G26820 ribonuclease 3 ribonuclease 3 -0.65 0.31 -0.34
65 AT4G20470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.32 -0.32
66 AT1G61410 DNA double-strand break repair and VJ recombination XRCC4 -0.65 0.29 -0.34
67 AT1G30990 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.65 0.31 -0.32
68 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.65 0.3 -0.3
69 AT5G12180 calcium-dependent protein kinase 17 calcium-dependent protein kinase
17		 0.65 0.3 -0.29
70 AT5G28170 transposable element gene 0.65 0.3 -0.31
71 AT1G36150 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.65 0.33 -0.36
72 AT5G09370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.65 0.34 -0.33
73 AT3G43630 Vacuolar iron transporter (VIT) family protein 0.65 0.31 -0.3
74 AT1G53640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 11 growth stages; Has 1186 Blast hits to
678 proteins in 89 species: Archae - 0; Bacteria - 50;
Metazoa - 731; Fungi - 92; Plants - 226; Viruses - 4; Other
Eukaryotes - 83 (source: NCBI BLink).		 0.64 0.29 -0.31
75 AT4G27120 CONTAINS InterPro DOMAIN/s: DDRGK domain
(InterPro:IPR019153); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.64 0.29 -0.32
76 AT3G58280 Arabidopsis phospholipase-like protein (PEARLI 4) with
TRAF-like domain		 0.64 0.31 -0.31
77 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.64 0.32 -0.33
78 AT2G04340 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.31 -0.3
79 AT3G60120 beta glucosidase 27 beta glucosidase 27 -0.64 0.33 -0.31
80 AT3G21410 F-box and associated interaction domains-containing protein 0.64 0.33 -0.34
81 AT5G40360 myb domain protein 115 myb domain protein 115, myb domain
protein 115		 0.64 0.31 -0.3
82 AT1G75790 SKU5 similar 18 SKU5 similar 18 0.64 0.3 -0.32
83 AT1G54110 Membrane fusion protein Use1 -0.64 0.34 -0.33
84 AT5G54700 Ankyrin repeat family protein -0.63 0.31 -0.33
85 AT4G10950 SGNH hydrolase-type esterase superfamily protein 0.63 0.32 -0.34
86 ATCG01020 ribosomal protein L32 ribosomal protein L32 0.63 0.33 -0.31
87 AT1G21220 transposable element gene -0.63 0.32 -0.31
88 AT4G16350 calcineurin B-like protein 6 calcineurin B-like protein 6,
SOS3-LIKE CALCIUM BINDING PROTEIN
2		 0.63 0.34 -0.32
89 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 0.63 0.33 -0.3
90 AT4G02460 DNA mismatch repair protein, putative POSTMEIOTIC SEGREGATION 1 0.63 0.34 -0.3
91 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.63 0.33 -0.32
92 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 0.63 0.31 -0.32
93 AT4G20770 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.3 -0.32
94 AT3G47230 transposable element gene -0.62 0.31 -0.32
95 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2		 -0.62 0.33 -0.3
96 AT3G21660 UBX domain-containing protein -0.62 0.32 -0.32
97 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 -0.62 0.32 -0.32
98 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.62 0.31 -0.34
99 AT5G35820 transposable element gene -0.62 0.31 -0.3
100 AT5G30480 transposable element gene -0.61 0.32 -0.31
101 AT2G27250 CLAVATA3 AtCLV3, CLAVATA3 -0.61 0.31 -0.3
102 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD		 -0.61 0.32 -0.32
103 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.3 -0.31
104 AT3G57100 Protein of unknown function (DUF677) -0.61 0.29 -0.31
105 AT3G04800 translocase inner membrane subunit 23-3 translocase inner membrane subunit
23-3, translocase inner membrane
subunit 23-3		 -0.61 0.3 -0.32
106 AT2G44180 methionine aminopeptidase 2A methionine aminopeptidase 2A -0.6 0.31 -0.31
107 AT4G03770 transposable element gene -0.6 0.32 -0.32
108 AT3G44570 Arabidopsis retrotransposon ORF-1 protein -0.6 0.29 -0.31
109 AT3G22060 Receptor-like protein kinase-related family protein -0.6 0.29 -0.3
110 AT1G41797 transposable element gene -0.6 0.31 -0.32
111 AT4G13960 F-box/RNI-like superfamily protein -0.59 0.29 -0.3
112 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24		 -0.59 0.32 -0.31
113 AT4G04530 transposable element gene -0.59 0.3 -0.32
114 AT5G43000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.59 0.31 -0.33
115 AT2G27280 Coiled-coil domain-containing protein 55 (DUF2040) -0.58 0.3 -0.32
116 AT3G28770 Protein of unknown function (DUF1216) -0.58 0.33 -0.32
117 AT5G14300 prohibitin 5 prohibitin 5, prohibitin 5 -0.58 0.31 -0.34
118 AT4G16430 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.58 0.32 -0.31
119 AT3G54130 Josephin family protein -0.57 0.32 -0.33
120 AT1G29860 WRKY DNA-binding protein 71 WRKY DNA-BINDING PROTEIN 71, WRKY
DNA-binding protein 71		 -0.57 0.32 -0.32
121 AT4G00700 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.57 0.3 -0.32
122 AT5G26140 Putative lysine decarboxylase family protein ATLOG9, LONELY GUY 9 -0.56 0.33 -0.33
123 AT3G42730 transposable element gene -0.56 0.31 -0.31
124 AT1G08700 Presenilin-1 Presenilin-1 -0.56 0.33 -0.32
125 AT1G31760 SWIB/MDM2 domain superfamily protein -0.56 0.32 -0.31
126 AT3G50170 Plant protein of unknown function (DUF247) -0.56 0.3 -0.33
127 AT2G18640 geranylgeranyl pyrophosphate synthase 4 geranylgeranyl pyrophosphate
synthase 4		 -0.55 0.34 -0.31
128 AT1G57750 cytochrome P450, family 96, subfamily A, polypeptide 15 cytochrome P450, family 96,
subfamily A, polypeptide 15,
MID-CHAIN ALKANE HYDROXYLASE 1		 -0.55 0.32 -0.32
129 AT5G04200 metacaspase 9 metacaspase 9, metacaspase 2f,
metacaspase 9, metacaspase 2f		 -0.55 0.31 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
130 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.76 0.45 -0.47 C0136