AT2G18510 : embryo defective 2444
Query Information
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AGICode AT2G18510
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G18510 RNA-binding (RRM/RBD/RNP motifs) family protein embryo defective 2444 1 0.3 -0.32
2 AT3G12570 FYD FYD 0.69 0.32 -0.3
3 AT4G11560 bromo-adjacent homology (BAH) domain-containing protein 0.67 0.32 -0.3
4 AT5G02590 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.28 -0.32
5 AT2G42520 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.32 -0.36
6 AT5G51300 splicing factor-related 0.64 0.32 -0.34
7 AT2G10740 transposable element gene -0.63 0.32 -0.31
8 AT1G30515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G21740.1); Has 20 Blast hits to 20 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.31 -0.32
9 AT5G41260 Protein kinase protein with tetratricopeptide repeat domain 0.63 0.33 -0.31
10 AT1G10130 endoplasmic reticulum-type calcium-transporting ATPase 3 ARABIDOPSIS THALIANA ER-TYPE
CA2+-ATPASE 3, endoplasmic
reticulum-type
calcium-transporting ATPase 3		 0.62 0.31 -0.33
11 AT3G54720 Peptidase M28 family protein ALTERED MERISTEM PROGRAM 1,
CONSTITUTIVE MORPHOGENESIS 2,
HAUPTLING, Multifolia, PRIMORDIA
TIMING		 -0.62 0.32 -0.31
12 AT5G13310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 7 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G13970.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.6 0.3 -0.32
13 AT1G28420 homeobox-1 homeobox-1 0.59 0.31 -0.31
14 AT2G13430 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.31 -0.32
15 AT2G29970 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 -0.58 0.33 -0.31
16 AT3G21040 transposable element gene 0.58 0.32 -0.33
17 AT1G60670 Protein of unknown function (DUF3755) 0.58 0.31 -0.33
18 AT2G31370 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.58 0.31 -0.31
19 AT4G24470 GATA-type zinc finger protein with TIFY domain GATA TRANSCRIPTION FACTOR 25,
TIFY1, Zinc-finger protein
expressed in Inflorescence
Meristem		 0.58 0.31 -0.29
20 AT5G43440 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.57 0.32 -0.3
21 AT4G34660 SH3 domain-containing protein 0.57 0.31 -0.28
22 AT1G31310 hydroxyproline-rich glycoprotein family protein -0.57 0.31 -0.33
23 AT4G33180 alpha/beta-Hydrolases superfamily protein 0.57 0.33 -0.29
24 AT3G05110 Domain of unknown function (DUF3444) -0.55 0.35 -0.3
25 AT2G17870 cold shock domain protein 3 ARABIDOPSIS COLD SHOCK DOMAIN
PROTEIN 3, cold shock domain
protein 3		 0.55 0.31 -0.3
26 AT1G32310 unknown protein; Has 28 Blast hits to 28 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.32 -0.32
27 AT4G19660 NPR1-like protein 4 ATNPR4, NPR1-like protein 4 -0.54 0.32 -0.3
28 AT5G19900 PRLI-interacting factor, putative 0.54 0.34 -0.33
29 AT3G16540 DegP protease 11 DegP protease 11 -0.54 0.31 -0.29
30 AT4G23660 polyprenyltransferase 1 polyprenyltransferase 1,
polyprenyltransferase 1		 -0.54 0.32 -0.32
31 AT3G01780 ARM repeat superfamily protein TPLATE 0.54 0.31 -0.3
32 AT3G04590 AT hook motif DNA-binding family protein 0.54 0.33 -0.33
33 AT2G45520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages; Has
260 Blast hits to 238 proteins in 75 species: Archae - 0;
Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38;
Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).		 0.53 0.32 -0.35
34 AT5G38450 cytochrome P450, family 735, subfamily A, polypeptide 1 cytochrome P450, family 735,
subfamily A, polypeptide 1		 -0.53 0.3 -0.31
35 AT4G01140 Protein of unknown function (DUF1191) -0.53 0.31 -0.31
36 AT5G51190 Integrase-type DNA-binding superfamily protein -0.53 0.33 -0.31
37 AT4G17790 SNARE associated Golgi protein family -0.53 0.31 -0.3
38 AT3G62080 SNF7 family protein 0.53 0.31 -0.3
39 AT4G31980 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF247, plant (InterPro:IPR004158),
Protein of unknown function DUF862, eukaryotic
(InterPro:IPR008580); BEST Arabidopsis thaliana protein
match is: Plant protein of unknown function (DUF247)
(TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in
183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi
- 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178
(source: NCBI BLink).		 0.53 0.32 -0.33
40 AT3G50060 myb domain protein 77 myb domain protein 77 -0.53 0.3 -0.35
41 AT3G17280 F-box and associated interaction domains-containing protein -0.52 0.32 -0.32
42 AT4G01880 methyltransferases 0.52 0.3 -0.32
43 AT5G17350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 15 plant
structures; EXPRESSED DURING: 8 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.52 0.31 -0.32
44 AT5G49370 Pleckstrin homology (PH) domain superfamily protein -0.51 0.3 -0.32
45 AT5G03270 lysine decarboxylase family protein LONELY GUY 6 -0.51 0.3 -0.31
46 AT4G27654 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.5 0.32 -0.31
47 AT4G18000 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.5 0.31 -0.31
48 AT5G51990 C-repeat-binding factor 4 C-repeat-binding factor 4,
DEHYDRATION-RESPONSIVE
ELEMENT-BINDING PROTEIN 1D		 -0.5 0.33 -0.33
49 AT2G32000 DNA topoisomerase, type IA, core -0.5 0.32 -0.31
50 AT3G57320 unknown protein; Has 30 Blast hits to 30 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.5 0.33 -0.3
51 AT2G21770 cellulose synthase A9 CESA09, cellulose synthase A9 -0.49 0.33 -0.32
52 AT5G45340 cytochrome P450, family 707, subfamily A, polypeptide 3 cytochrome P450, family 707,
subfamily A, polypeptide 3		 -0.49 0.32 -0.32
53 AT4G03940 unknown protein; Has 8 Blast hits to 8 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 -0.48 0.33 -0.31
54 AT4G22050 Eukaryotic aspartyl protease family protein -0.46 0.32 -0.29
55 AT4G21240 F-box and associated interaction domains-containing protein -0.46 0.31 -0.33
56 AT3G07140 GPI transamidase component Gpi16 subunit family protein -0.46 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
57 C0179 MST_2494.8 - - - -0.48 0.3 -0.31