AT2G19480 : nucleosome assembly protein 1;2
Query Information
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AGICode AT2G19480
Description nucleosome assembly protein 1;2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 1 0.33 -0.32
2 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 0.89 0.31 -0.32
3 AT1G66070 Translation initiation factor eIF3 subunit 0.89 0.31 -0.31
4 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 0.89 0.32 -0.31
5 AT4G28450 nucleotide binding;protein binding 0.89 0.31 -0.31
6 AT5G11760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1764, eukaryotic (InterPro:IPR013885);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.86 0.32 -0.32
7 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.86 0.29 -0.33
8 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.86 0.3 -0.32
9 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog 0.86 0.32 -0.31
10 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 0.85 0.32 -0.3
11 AT2G42710 Ribosomal protein L1p/L10e family 0.85 0.31 -0.31
12 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.85 0.32 -0.3
13 AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.85 0.31 -0.32
14 AT3G13230 RNA-binding KH domain-containing protein 0.85 0.32 -0.3
15 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 0.84 0.29 -0.33
16 AT2G44860 Ribosomal protein L24e family protein 0.84 0.3 -0.29
17 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.84 0.32 -0.33
18 AT2G32220 Ribosomal L27e protein family 0.84 0.32 -0.3
19 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 0.84 0.33 -0.32
20 AT5G35620 Eukaryotic initiation factor 4E protein EUKARYOTIC INITIATION FACTOR
(ISO)4E, EUKARYOTIC TRANSLATION
INITATION FACTOR 4E2, eukaryotic
translation Initiation Factor
isoform 4E, LSP, LOSS OF
SUSCEPTIBILITY TO POTYVIRUS 1		 0.83 0.32 -0.3
21 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.83 0.31 -0.31
22 AT5G19300 CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), Protein of unknown
function DUF171 (InterPro:IPR003750); Has 3649 Blast hits
to 1964 proteins in 291 species: Archae - 113; Bacteria -
121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses -
4; Other Eukaryotes - 1703 (source: NCBI BLink).		 0.83 0.31 -0.31
23 AT1G55900 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 embryo defective 1860, TIM50 0.83 0.31 -0.29
24 AT2G45710 Zinc-binding ribosomal protein family protein 0.82 0.3 -0.33
25 AT3G51800 metallopeptidase M24 family protein A. THALIANA ERBB-3 BINDING PROTEIN
1, ATG2, ERBB-3 BINDING PROTEIN 1		 0.82 0.33 -0.3
26 AT4G10620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.82 0.31 -0.31
27 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 0.82 0.31 -0.31
28 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 0.82 0.3 -0.29
29 AT3G23940 dehydratase family 0.81 0.32 -0.29
30 AT1G06560 NOL1/NOP2/sun family protein 0.81 0.34 -0.32
31 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 0.81 0.31 -0.31
32 AT1G76160 SKU5 similar 5 SKU5 similar 5 0.81 0.32 -0.31
33 AT3G15790 methyl-CPG-binding domain 11 ATMBD11, methyl-CPG-binding domain
11		 -0.81 0.31 -0.31
34 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.81 0.3 -0.31
35 AT1G14980 chaperonin 10 chaperonin 10 0.81 0.34 -0.31
36 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.81 0.31 -0.31
37 AT2G19385 zinc ion binding 0.81 0.3 -0.3
38 AT3G23990 heat shock protein 60 heat shock protein 60, HEAT SHOCK
PROTEIN 60-3B		 0.81 0.29 -0.3
39 AT3G49080 Ribosomal protein S5 domain 2-like superfamily protein 0.81 0.31 -0.32
40 AT4G38710 glycine-rich protein 0.81 0.3 -0.32
41 AT3G60360 embryo sac development arrest 14 EMBRYO SAC DEVELOPMENT ARREST 14,
U3 SMALL NUCLEOLAR RNA-ASSOCIATED
PROTEIN 11		 0.81 0.33 -0.31
42 AT4G19210 RNAse l inhibitor protein 2 ATP-binding cassette E2,
ARABIDOPSIS THALIANA RNASE L
INHIBITOR PROTEIN 2, RNAse l
inhibitor protein 2		 0.81 0.31 -0.32
43 AT1G29880 glycyl-tRNA synthetase / glycine--tRNA ligase 0.81 0.33 -0.34
44 AT2G19540 Transducin family protein / WD-40 repeat family protein 0.81 0.33 -0.31
45 AT3G25940 TFIIB zinc-binding protein 0.8 0.33 -0.32
46 AT3G13860 heat shock protein 60-3A heat shock protein 60-3A 0.8 0.33 -0.31
47 AT1G16870 mitochondrial 28S ribosomal protein S29-related 0.8 0.3 -0.31
48 AT4G33865 Ribosomal protein S14p/S29e family protein 0.8 0.32 -0.31
49 AT2G40330 PYR1-like 6 PYR1-like 6, regulatory components
of ABA receptor 9		 0.8 0.31 -0.33
50 AT2G39795 Mitochondrial glycoprotein family protein 0.8 0.33 -0.32
51 AT4G13850 glycine-rich RNA-binding protein 2 GLYCINE-RICH RNA-BINDING PROTEIN
2, glycine-rich RNA-binding
protein 2, glycine rich protein 2		 0.8 0.31 -0.34
52 AT1G75200 flavodoxin family protein / radical SAM domain-containing
protein		 0.8 0.32 -0.33
53 AT1G01240 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 11 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16
species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0;
Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.8 0.32 -0.33
54 AT3G62940 Cysteine proteinases superfamily protein 0.8 0.34 -0.31
55 AT1G29900 carbamoyl phosphate synthetase B carbamoyl phosphate synthetase B,
VENOSA 3		 0.79 0.31 -0.32
56 AT2G20940 Protein of unknown function (DUF1279) 0.79 0.29 -0.32
57 AT3G18165 modifier of snc1,4 Modifier of snc1,4 0.79 0.32 -0.34
58 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1		 0.79 0.31 -0.31
59 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 0.79 0.3 -0.3
60 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 0.79 0.31 -0.33
61 AT1G52160 tRNAse Z3 tRNAse Z3 0.79 0.31 -0.33
62 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 0.79 0.32 -0.31
63 AT3G25120 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.78 0.31 -0.29
64 AT3G04770 40s ribosomal protein SA B 40s ribosomal protein SA B 0.78 0.33 -0.3
65 AT4G31985 Ribosomal protein L39 family protein 0.78 0.32 -0.32
66 AT1G48570 zinc finger (Ran-binding) family protein 0.78 0.32 -0.32
67 AT3G04710 ankyrin repeat family protein tetratricopeptide repeat 10 0.78 0.31 -0.3
68 AT3G02190 Ribosomal protein L39 family protein 0.78 0.3 -0.31
69 AT3G10090 Nucleic acid-binding, OB-fold-like protein 0.78 0.32 -0.33
70 AT2G36690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.78 0.3 -0.33
71 AT5G57870 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G1		 0.78 0.33 -0.31
72 AT4G12470 azelaic acid induced 1 azelaic acid induced 1 0.78 0.32 -0.34
73 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases 0.78 0.3 -0.33
74 AT3G19620 Glycosyl hydrolase family protein -0.78 0.31 -0.3
75 AT3G55605 Mitochondrial glycoprotein family protein 0.78 0.3 -0.36
76 AT3G22300 ribosomal protein S10 ribosomal protein S10 0.78 0.31 -0.32
77 AT3G01800 Ribosome recycling factor 0.78 0.33 -0.3
78 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.78 0.29 -0.34
79 AT1G51140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.78 0.32 -0.32
80 AT3G04580 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 ETHYLENE INSENSITIVE 4 0.78 0.31 -0.28
81 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1		 0.77 0.3 -0.32
82 AT1G61570 translocase of the inner mitochondrial membrane 13 translocase of the inner
mitochondrial membrane 13		 0.77 0.31 -0.33
83 AT1G64880 Ribosomal protein S5 family protein 0.77 0.29 -0.32
84 AT3G19130 RNA-binding protein 47B RNA-binding protein 47B,
RNA-binding protein 47B		 0.77 0.33 -0.34
85 AT3G06930 protein arginine methyltransferase 4B ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 4B,
protein arginine methyltransferase
4B		 0.77 0.32 -0.32
86 AT2G20585 nuclear fusion defective 6 NUCLEAR FUSION DEFECTIVE 6 0.77 0.32 -0.31
87 AT2G33210 heat shock protein 60-2 heat shock protein 60-2 0.77 0.32 -0.31
88 AT5G40770 prohibitin 3 prohibitin 3, prohibitin 3 0.77 0.3 -0.3
89 AT1G53645 hydroxyproline-rich glycoprotein family protein 0.77 0.31 -0.31
90 AT3G03600 ribosomal protein S2 ribosomal protein S2 0.77 0.31 -0.33
91 AT1G26740 Ribosomal L32p protein family 0.77 0.33 -0.31
92 AT1G15740 Leucine-rich repeat family protein -0.76 0.33 -0.29
93 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 -0.76 0.29 -0.32
94 AT3G14067 Subtilase family protein -0.75 0.34 -0.32
95 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.73 0.3 -0.32
96 AT2G41870 Remorin family protein -0.72 0.3 -0.29
97 AT3G61890 homeobox 12 homeobox 12, ARABIDOPSIS THALIANA
HOMEOBOX 12, homeobox 12		 -0.72 0.32 -0.32
98 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.72 0.32 -0.31
99 AT3G05640 Protein phosphatase 2C family protein -0.71 0.34 -0.33
100 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 -0.7 0.32 -0.32
101 AT1G07430 highly ABA-induced PP2C gene 2 highly ABA-induced PP2C gene 2 -0.7 0.3 -0.34
102 AT4G17030 expansin-like B1 AT-EXPR, expansin-like B1,
ATEXPR1, ATHEXP BETA 3.1,
expansin-like B1, EXPR		 -0.7 0.32 -0.31
103 AT5G57040 Lactoylglutathione lyase / glyoxalase I family protein -0.7 0.3 -0.31
104 AT5G45630 Protein of unknown function, DUF584 -0.68 0.29 -0.34
105 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 -0.68 0.31 -0.3
106 AT1G69260 ABI five binding protein ABI five binding protein -0.68 0.31 -0.32
107 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.68 0.34 -0.3
108 AT1G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 62
Blast hits to 62 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.32 -0.29
109 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.66 0.31 -0.31
110 AT5G16150 plastidic GLC translocator GLUCOSE TRANSPORTER 1, plastidic
GLC translocator		 -0.66 0.31 -0.32
111 AT5G37360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.65 0.29 -0.32
112 AT1G53170 ethylene response factor 8 ATERF-8, ETHYLENE RESPONSE ELEMENT
BINDING FACTOR 4, ethylene
response factor 8		 -0.65 0.33 -0.31
113 AT4G10250 HSP20-like chaperones superfamily protein ATHSP22.0 -0.64 0.32 -0.32
114 AT4G22360 SWIB complex BAF60b domain-containing protein -0.64 0.3 -0.3
115 AT2G20770 GCR2-like 2 GCR2-like 2 -0.64 0.3 -0.31
116 AT4G01280 Homeodomain-like superfamily protein -0.63 0.3 -0.32
117 AT1G41810 transposable element gene -0.63 0.31 -0.32
118 AT5G24750 UDP-Glycosyltransferase superfamily protein -0.63 0.29 -0.32
119 AT5G58160 actin binding -0.63 0.33 -0.3
120 AT1G01520 Homeodomain-like superfamily protein ALTERED SEED GERMINATION 4 -0.63 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
121 C0057 Anthranilic acid - Anthranilate tryptophan biosynthesis,
benzoylanthranilate biosynthesis 		-0.82 0.44 -0.43 C0057
122 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.79 0.42 -0.46
123 C0189 Nicotinic acid - Nicotinate pyridine nucleotide cycling (plants),
aldoxime degradation 		-0.72 0.33 -0.32 C0189
124 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine -0.68 0.44 -0.44 C0030
125 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II -0.65 0.3 -0.31 C0097