AGICode | AT2G11110 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G11110 | transposable element gene | 1 | 0.33 | -0.34 | |||
2 | AT1G48170 | unknown protein; Has 78 Blast hits to 78 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.31 | -0.31 | |||
3 | AT4G04170 | transposable element gene | 0.61 | 0.3 | -0.32 | |||
4 | AT3G23130 | C2H2 and C2HC zinc fingers superfamily protein | FLORAL DEFECTIVE 10, FLORAL ORGAN NUMBER 1, SUPERMAN |
0.59 | 0.33 | -0.31 | ||
5 | AT3G05070 | CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink). |
0.58 | 0.33 | -0.3 | |||
6 | AT1G78510 | solanesyl diphosphate synthase 1 | solanesyl diphosphate synthase 1 | 0.57 | 0.29 | -0.32 | ||
7 | AT1G16650 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.56 | 0.33 | -0.32 | |||
8 | AT4G31740 | Sec1/munc18-like (SM) proteins superfamily | 0.56 | 0.31 | -0.31 | |||
9 | AT1G22140 | unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.56 | 0.31 | -0.31 | |||
10 | AT3G42830 | RING/U-box superfamily protein | 0.56 | 0.31 | -0.31 | |||
11 | AT3G28170 | unknown protein; Has 2 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.34 | -0.31 | |||
12 | AT3G24030 | hydroxyethylthiazole kinase family protein | 0.55 | 0.31 | -0.33 | |||
13 | AT3G57785 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits to 121 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.55 | 0.33 | -0.32 | |||
14 | AT4G28900 | transposable element gene | 0.55 | 0.31 | -0.29 | |||
15 | AT3G42480 | transposable element gene | -0.54 | 0.31 | -0.3 | |||
16 | AT1G62170 | Serine protease inhibitor (SERPIN) family protein | 0.54 | 0.3 | -0.34 | |||
17 | AT5G07380 | unknown protein; Has 84 Blast hits to 81 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.53 | 0.31 | -0.3 | |||
18 | AT2G38950 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
0.53 | 0.32 | -0.31 | |||
19 | AT3G15870 | Fatty acid desaturase family protein | 0.53 | 0.32 | -0.32 | |||
20 | AT5G61920 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.53 | 0.31 | -0.3 | |||
21 | AT1G30460 | cleavage and polyadenylation specificity factor 30 | ARABIDOPSIS THALIANA CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 30, cleavage and polyadenylation specificity factor 30 |
-0.53 | 0.32 | -0.32 | ||
22 | AT5G18350 | Disease resistance protein (TIR-NBS-LRR class) family | 0.52 | 0.31 | -0.31 | |||
23 | AT2G02250 | phloem protein 2-B2 | phloem protein 2-B2, phloem protein 2-B2 |
0.52 | 0.33 | -0.31 | ||
24 | AT3G48030 | hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein |
-0.52 | 0.33 | -0.3 | |||
25 | AT1G56030 | RING/U-box superfamily protein | 0.51 | 0.31 | -0.32 | |||
26 | AT1G29230 | CBL-interacting protein kinase 18 | ATCIPK18, WPL4-LIKE 1, CBL-interacting protein kinase 18, SNF1-RELATED PROTEIN KINASE 3.20, WPL4-LIKE 1 |
0.51 | 0.31 | -0.31 | ||
27 | AT3G45870 | nodulin MtN21 /EamA-like transporter family protein | -0.51 | 0.32 | -0.31 | |||
28 | AT2G42940 | Predicted AT-hook DNA-binding family protein | -0.51 | 0.31 | -0.33 | |||
29 | AT4G35520 | MUTL protein homolog 3 | ATMLH3, MUTL protein homolog 3 | -0.5 | 0.28 | -0.32 | ||
30 | AT2G13680 | callose synthase 5 | ARABIDOPSIS THALIANA GLUCAN SYNTHASE-LIKE 2, callose synthase 5, GLUCAN SYNTHASE-LIKE 2 |
0.5 | 0.3 | -0.31 | ||
31 | AT5G65180 | ENTH/VHS family protein | -0.5 | 0.32 | -0.32 | |||
32 | AT3G50860 | Clathrin adaptor complex small chain family protein | 0.5 | 0.31 | -0.32 | |||
33 | AT3G14340 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.5 | 0.31 | -0.31 | |||
34 | AT1G27240 | Paired amphipathic helix (PAH2) superfamily protein | 0.5 | 0.31 | -0.31 | |||
35 | AT2G17770 | basic region/leucine zipper motif 27 | basic region/leucine zipper motif 27, basic region/leucine zipper motif 27, FD PARALOG |
-0.49 | 0.31 | -0.29 | ||
36 | AT3G28510 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.49 | 0.32 | -0.31 | |||
37 | AT3G58760 | Integrin-linked protein kinase family | 0.49 | 0.33 | -0.31 | |||
38 | AT5G07230 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.49 | 0.3 | -0.31 | |||
39 | AT2G07280 | unknown protein; Has 19 Blast hits to 19 proteins in 3 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.49 | 0.32 | -0.29 | |||
40 | AT1G66930 | Protein kinase superfamily protein | 0.49 | 0.31 | -0.29 | |||
41 | AT1G61700 | RNA polymerases N / 8 kDa subunit | 0.49 | 0.3 | -0.32 | |||
42 | AT1G31960 | unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.48 | 0.31 | -0.32 | |||
43 | AT1G23250 | Caleosin-related family protein | -0.48 | 0.31 | -0.33 | |||
44 | AT5G10270 | cyclin-dependent kinase C;1 | cyclin-dependent kinase C;1 | 0.47 | 0.33 | -0.3 | ||
45 | AT5G50440 | membrin 12 | ATMEMB12, membrin 12 | 0.47 | 0.33 | -0.31 | ||
46 | AT2G40230 | HXXXD-type acyl-transferase family protein | -0.47 | 0.32 | -0.3 | |||
47 | AT3G18720 | F-box family protein | -0.47 | 0.33 | -0.31 | |||
48 | AT3G58290 | TRAF-like superfamily protein | 0.47 | 0.33 | -0.31 | |||
49 | AT4G35280 | C2H2-like zinc finger protein | DUO1-ACTIVATED ZINC FINGER 2 | 0.47 | 0.33 | -0.34 | ||
50 | AT3G14820 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.47 | 0.32 | -0.31 | |||
51 | AT3G56000 | cellulose synthase like A14 | ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE A14, cellulose synthase like A14 |
-0.46 | 0.31 | -0.34 | ||
52 | AT3G26800 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G36925.1); Has 9 Blast hits to 9 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.46 | 0.3 | -0.3 | |||
53 | AT1G14930 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.46 | 0.33 | -0.31 | |||
54 | AT1G11770 | FAD-binding Berberine family protein | -0.46 | 0.32 | -0.3 | |||
55 | AT4G15150 | glycine-rich protein | 0.45 | 0.32 | -0.3 | |||
56 | AT4G17785 | myb domain protein 39 | myb domain protein 39 | 0.45 | 0.3 | -0.32 | ||
57 | AT1G42690 | transposable element gene | 0.45 | 0.31 | -0.32 | |||
58 | AT2G34870 | hydroxyproline-rich glycoprotein family protein | maternal effect embryo arrest 26 | -0.45 | 0.29 | -0.31 | ||
59 | AT2G33420 | Protein of unknown function (DUF810) | -0.45 | 0.31 | -0.29 | |||
60 | AT3G26040 | HXXXD-type acyl-transferase family protein | -0.44 | 0.31 | -0.31 | |||
61 | AT1G01130 | CONTAINS InterPro DOMAIN/s: CBL-interacting protein kinase (InterPro:IPR020660), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47170.1); Has 176 Blast hits to 176 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.44 | 0.31 | -0.32 | |||
62 | AT5G20760 | transposable element gene | -0.43 | 0.31 | -0.32 | |||
63 | AT2G06160 | transposable element gene | -0.43 | 0.32 | -0.33 | |||
64 | AT1G60320 | Toll-Interleukin-Resistance (TIR) domain family protein | -0.41 | 0.31 | -0.31 | |||
65 | AT3G09790 | ubiquitin 8 | ubiquitin 8 | -0.41 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
66 | C0208 | Phosphatidylinositol-34:2 | - | Phosphatidylinositol-34:2 | 3-phosphoinositide biosynthesis, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, sphingolipid biosynthesis, linoleate biosynthesis I, cutin biosynthesis, glycerophosphodiester degradation, phosphate acquisition, glutathione redox reactions I |
-0.77 | 0.49 | -0.51 | ||
67 | C0084 | Digalactosyldiacylglycerol-36:5 | - | Digalactosyldiacylglycerol-36:5 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.71 | 0.51 | -0.51 | ||
68 | C0085 | Digalactosyldiacylglycerol-36:6 | - | Digalactosyldiacylglycerol-36:6 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.7 | 0.51 | -0.49 | ||
69 | C0083 | Digalactosyldiacylglycerol-36:4 | - | Digalactosyldiacylglycerol-36:4 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.7 | 0.49 | -0.53 | ||
70 | C0199 | Phosphatidylethanolamine-36:6 | - | Phosphatidylethanolamine-36:6 | phospholipid biosynthesis II, linoleate biosynthesis I, phosphatidylethanolamine biosynthesis I, phosphatidylethanolamine biosynthesis II, glutathione redox reactions I |
-0.7 | 0.51 | -0.51 | ||
71 | C0081 | Digalactosyldiacylglycerol-36:2 | - | Digalactosyldiacylglycerol-36:2 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.7 | 0.5 | -0.53 | ||
72 | C0247 | Sulfoquinovosyldiacylglycerol-34:3 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.66 | 0.51 | -0.49 | ||
73 | C0108 | GMP | - | GMP | guanine and guanosine salvage II, guanosine nucleotides degradation I, guanosine nucleotides degradation II, guanine and guanosine salvage III, purine nucleotides de novo biosynthesis II, purine nucleotide metabolism (phosphotransfer and nucleotide modification) |
0.62 | 0.48 | -0.44 | ||
74 | C0238 | Sitosterol 3-O-β-D-glucoside | - | 3-O-β-D-Glucosyl-β-sitosterol | sphingolipid biosynthesis | -0.62 | 0.32 | -0.32 | ||
75 | C0156 | Monogalactosyldiacylgycerol-36:5 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
-0.61 | 0.33 | -0.34 | ||
76 | C0197 | Phosphatidylcholine-36:1 | - | Phosphatidylcholine-36:1 | choline biosynthesis III, diacylglycerol biosynthesis, phospholipases, triacylglycerol biosynthesis, linoleate biosynthesis I, phosphatidylcholine biosynthesis III, glutathione redox reactions I |
-0.6 | 0.49 | -0.47 | ||
77 | C0205 | Phosphatidylglycerol-34:3 | - | Phosphatidylglycerol-34:3 | cardiolipin biosynthesis II, linoleate biosynthesis I, glycerophosphodiester degradation, glutathione redox reactions I |
-0.6 | 0.32 | -0.33 | ||
78 | C0203 | Phosphatidylglycerol-34:1 | - | Phosphatidylglycerol-34:1 | cardiolipin biosynthesis II, linoleate biosynthesis I, glycerophosphodiester degradation, glutathione redox reactions I |
-0.59 | 0.33 | -0.37 | ||
79 | C0064 | Campesterol 3-O-β-D-glucoside | - | - | - | -0.58 | 0.33 | -0.36 | ||
80 | C0152 | Monogalactosyldiacylgycerol-34:5 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
-0.57 | 0.32 | -0.35 | ||
81 | C0246 | Sulfoquinovosyldiacylglycerol-34:2 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.57 | 0.32 | -0.32 | ||
82 | C0157 | Monogalactosyldiacylgycerol-36:6 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
-0.56 | 0.31 | -0.33 | ||
83 | C0077 | Digalactosyldiacylglycerol-34:2 | - | Digalactosyldiacylglycerol-34:2 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.55 | 0.34 | -0.34 | ||
84 | C0202 | Phosphatidylglycerol-34:0 | - | Phosphatidylglycerol-34:0 | cardiolipin biosynthesis II, linoleate biosynthesis I, glycerophosphodiester degradation, glutathione redox reactions I |
-0.55 | 0.34 | -0.33 | ||
85 | C0150 | Monogalactosyldiacylgycerol-34:3 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
-0.53 | 0.35 | -0.32 | ||
86 | C0078 | Digalactosyldiacylglycerol-34:3 | - | Digalactosyldiacylglycerol-34:3 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.53 | 0.33 | -0.34 | ||
87 | C0250 | Sulfoquinovosyldiacylglycerol-36:5 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.52 | 0.33 | -0.35 | ||
88 | C0076 | Digalactosyldiacylglycerol-34:1 | - | Digalactosyldiacylglycerol-34:1 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.51 | 0.33 | -0.33 | ||
89 | C0245 | Sulfoquinovosyldiacylglycerol-34:1 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.51 | 0.32 | -0.32 | ||
90 | C0206 | Phosphatidylglycerol-34:4 | - | Phosphatidylglycerol-34:4 | cardiolipin biosynthesis II, linoleate biosynthesis I, glycerophosphodiester degradation, glutathione redox reactions I |
-0.5 | 0.29 | -0.34 |