AT2G11220 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G11220
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G11220 transposable element gene 1 0.32 -0.31
2 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23		 0.78 0.32 -0.31
3 AT1G17930 Aminotransferase-like, plant mobile domain family protein 0.71 0.31 -0.32
4 AT4G22460 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.69 0.34 -0.32
5 AT3G16785 phospholipase D P1 PHOSPHOLIPASE D ZETA 1,
phospholipase D P1, PHOSPHOLIPASE
D ZETA1, PLDZETA1		 0.68 0.31 -0.3
6 AT2G40810 homolog of yeast autophagy 18C homolog of yeast autophagy 18C,
homolog of yeast autophagy 18C		 0.68 0.31 -0.29
7 AT2G04820 transposable element gene -0.67 0.34 -0.33
8 AT4G10240 B-box zinc finger family protein 0.67 0.34 -0.32
9 AT2G47020 Peptide chain release factor 1 -0.65 0.32 -0.32
10 AT3G13820 F-box and associated interaction domains-containing protein -0.65 0.32 -0.31
11 AT1G52820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.3 -0.32
12 AT5G23270 sugar transporter 11 SUGAR TRANSPORTER 11, sugar
transporter 11		 0.64 0.29 -0.32
13 AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein 0.64 0.32 -0.32
14 AT5G26930 GATA transcription factor 23 GATA transcription factor 23 -0.63 0.32 -0.32
15 AT1G11780 oxidoreductase, 2OG-Fe(II) oxygenase family protein -0.63 0.31 -0.28
16 AT3G22040 Domain of unknown function (DUF26) 0.63 0.33 -0.34
17 AT1G62700 Arabidopsis NAC domain containing protein 26 Arabidopsis NAC domain containing
protein 26, VASCULAR RELATED
NAC-DOMAIN PROTEIN 5		 0.63 0.32 -0.33
18 AT2G12230 pseudogene, C-1-tetrahydrofolate synthase, blastp match of
91% identity and 2.9e-07 P-value to
GP|9843502|emb|CAC03667.1||AL133260 dJ292B18.2 (novel
protein similar to methylenetetrahydrofolate dehydrogenase
(NADP+ dependent), methenyltetrahydrofolate cyclohydrolase,
formyltetrahydrofolate synthetase (MTHFD1) (EC 1.5.1.5, EC
3.5.4.9, EC-TRUNCATED-		 -0.63 0.31 -0.3
19 AT1G55590 RNI-like superfamily protein 0.62 0.31 -0.33
20 AT5G39440 SNF1-related protein kinase 1.3 SNF1-related protein kinase 1.3 -0.62 0.32 -0.32
21 AT1G63070 pentatricopeptide (PPR) repeat-containing protein 0.62 0.32 -0.31
22 AT2G43680 IQ-domain 14 IQ-domain 14 0.62 0.33 -0.31
23 AT4G24560 ubiquitin-specific protease 16 ubiquitin-specific protease 16 0.61 0.31 -0.31
24 AT4G11940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11930.1); Has 37 Blast hits
to 37 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.33 -0.33
25 AT1G55510 branched-chain alpha-keto acid decarboxylase E1 beta
subunit		 branched-chain alpha-keto acid
decarboxylase E1 beta subunit		 0.61 0.32 -0.34
26 AT4G09560 Protease-associated (PA) RING/U-box zinc finger family
protein		 0.61 0.31 -0.29
27 AT3G21060 Transducin/WD40 repeat-like superfamily protein RbBP5 LIKE -0.6 0.33 -0.31
28 AT3G12300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF667
(InterPro:IPR007714); Has 373 Blast hits to 371 proteins in
116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi
- 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85
(source: NCBI BLink).		 -0.6 0.33 -0.32
29 AT1G16190 Rad23 UV excision repair protein family RADIATION SENSITIVE23A -0.6 0.32 -0.32
30 AT3G46710 NB-ARC domain-containing disease resistance protein -0.6 0.3 -0.31
31 AT1G08590 Leucine-rich receptor-like protein kinase family protein -0.6 0.3 -0.34
32 AT3G08750 F-box and associated interaction domains-containing protein -0.59 0.32 -0.33
33 AT1G19030 transposable element gene -0.59 0.31 -0.31
34 AT5G43530 Helicase protein with RING/U-box domain 0.59 0.3 -0.32
35 AT5G13180 NAC domain containing protein 83 NAC domain containing protein 83,
NAC domain containing protein 83,
VND-interacting 2		 0.59 0.31 -0.31
36 AT1G60490 vacuolar protein sorting 34 ATVPS34, PHOSPATIDYLINOSITOL
3-KINASE, vacuolar protein sorting
34		 0.59 0.31 -0.29
37 AT3G23630 isopentenyltransferase 7 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 7,
isopentenyltransferase 7		 -0.59 0.31 -0.29
38 AT5G23890 LOCATED IN: mitochondrion, chloroplast thylakoid membrane,
chloroplast, plastid, chloroplast envelope; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G52410.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.59 0.33 -0.34
39 AT4G18540 unknown protein; Has 209 Blast hits to 205 proteins in 54
species: Archae - 0; Bacteria - 17; Metazoa - 2; Fungi -
150; Plants - 40; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.59 0.3 -0.34
40 AT3G14750 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits
to 3091 proteins in 519 species: Archae - 61; Bacteria -
669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses -
4; Other Eukaryotes - 1123 (source: NCBI BLink).		 -0.59 0.3 -0.3
41 AT2G04038 basic leucine-zipper 48 basic leucine-zipper 48, basic
leucine-zipper 48		 0.59 0.3 -0.33
42 AT3G04600 Nucleotidylyl transferase superfamily protein -0.59 0.31 -0.33
43 AT5G64590 BEST Arabidopsis thaliana protein match is: Putative
endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.58 0.31 -0.33
44 AT4G03840 transposable element gene 0.58 0.32 -0.31
45 AT5G38500 Domain of unknown function (DUF313) -0.58 0.28 -0.32
46 AT1G23160 Auxin-responsive GH3 family protein -0.58 0.32 -0.35
47 AT4G05610 transposable element gene -0.58 0.31 -0.3
48 AT1G11970 Ubiquitin-like superfamily protein 0.58 0.34 -0.32
49 AT1G18750 AGAMOUS-like 65 AGAMOUS-like 65 0.58 0.3 -0.31
50 AT3G05240 mitochondrial editing factor 19 mitochondrial editing factor 19 -0.58 0.32 -0.31
51 AT2G31590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G04730.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.58 0.3 -0.31
52 AT3G29660 transposable element gene 0.58 0.31 -0.31
53 AT3G12540 Protein of unknown function, DUF547 -0.58 0.31 -0.29
54 AT3G61490 Pectin lyase-like superfamily protein 0.57 0.34 -0.3
55 AT1G56380 Mitochondrial transcription termination factor family
protein		 -0.57 0.32 -0.31
56 AT2G37840 Protein kinase superfamily protein 0.57 0.34 -0.29
57 AT1G50700 calcium-dependent protein kinase 33 calcium-dependent protein kinase
33		 0.57 0.33 -0.31
58 AT4G24140 alpha/beta-Hydrolases superfamily protein -0.56 0.34 -0.31
59 AT5G26830 Threonyl-tRNA synthetase -0.56 0.3 -0.31
60 AT2G24410 BEST Arabidopsis thaliana protein match is: SMAD/FHA
domain-containing protein (TAIR:AT3G20550.1); Has 194
Blast hits to 194 proteins in 92 species: Archae - 0;
Bacteria - 0; Metazoa - 118; Fungi - 33; Plants - 30;
Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).		 0.56 0.3 -0.32
61 AT4G05170 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.56 0.33 -0.33
62 AT4G13440 Calcium-binding EF-hand family protein -0.55 0.32 -0.3
63 AT1G65480 PEBP (phosphatidylethanolamine-binding protein) family
protein		 FLOWERING LOCUS T -0.55 0.29 -0.32
64 AT3G16020 F-box associated ubiquitination effector protein -0.54 0.31 -0.34