AT2G24160 : -
Query Information
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AGICode AT2G24160
Description pseudogene, leucine rich repeat protein family, contains leucine rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611; contains some similarity to Cf-4 (Lycopersicon hirsutum) gi|2808683|emb|CAA05268; blastp match of 37% identity and 8.4e-98 P-value to GP|2808683|emb|CAA05268.1||AJ002235 Cf-4 {Lycopersicon hirsutum}
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G24160 pseudogene, leucine rich repeat protein family, contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Cf-4
(Lycopersicon hirsutum) gi|2808683|emb|CAA05268; blastp
match of 37% identity and 8.4e-98 P-value to
GP|2808683|emb|CAA05268.1||AJ002235 Cf-4 {Lycopersicon
hirsutum}		 1 0.31 -0.33
2 AT1G35710 Protein kinase family protein with leucine-rich repeat
domain		 0.75 0.32 -0.33
3 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 0.75 0.3 -0.3
4 AT5G52750 Heavy metal transport/detoxification superfamily protein 0.72 0.31 -0.3
5 AT5G10380 RING/U-box superfamily protein ATRING1, RING1 0.7 0.33 -0.31
6 AT3G18370 C2 domain-containing protein ATSYTF, NTMC2T3, NTMC2TYPE3, SYTF 0.7 0.31 -0.33
7 AT2G14560 Protein of unknown function (DUF567) LATE UPREGULATED IN RESPONSE TO
HYALOPERONOSPORA PARASITICA		 0.7 0.31 -0.31
8 AT4G14400 ankyrin repeat family protein ACCELERATED CELL DEATH 6 0.69 0.32 -0.32
9 AT1G23840 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 18 plant structures; EXPRESSED DURING: 12 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G23850.1); Has 53 Blast hits to 48
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.69 0.31 -0.34
10 AT1G13470 Protein of unknown function (DUF1262) 0.69 0.33 -0.32
11 AT3G50950 HOPZ-ACTIVATED RESISTANCE 1 HOPZ-ACTIVATED RESISTANCE 1 0.68 0.32 -0.31
12 AT2G25510 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.33 -0.31
13 AT3G56400 WRKY DNA-binding protein 70 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 70, WRKY
DNA-binding protein 70		 0.67 0.31 -0.31
14 AT1G21250 cell wall-associated kinase PRO25, cell wall-associated kinase 0.67 0.35 -0.33
15 AT1G19960 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 0.66 0.31 -0.3
16 AT3G60420 Phosphoglycerate mutase family protein 0.66 0.31 -0.29
17 AT5G52760 Copper transport protein family 0.66 0.31 -0.3
18 AT4G23220 cysteine-rich RLK (RECEPTOR-like protein kinase) 14 cysteine-rich RLK (RECEPTOR-like
protein kinase) 14		 0.66 0.3 -0.3
19 AT1G52380 NUP50 (Nucleoporin 50 kDa) protein -0.65 0.33 -0.32
20 AT5G03350 Legume lectin family protein 0.65 0.32 -0.31
21 AT4G23180 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 cysteine-rich RLK (RECEPTOR-like
protein kinase) 10, RLK4		 0.65 0.31 -0.31
22 AT5G54610 ankyrin ankyrin 0.64 0.32 -0.32
23 AT2G32680 receptor like protein 23 receptor like protein 23, receptor
like protein 23		 0.64 0.32 -0.34
24 AT3G28830 Protein of unknown function (DUF1216) 0.63 0.31 -0.33
25 AT1G15890 Disease resistance protein (CC-NBS-LRR class) family 0.63 0.32 -0.31
26 AT3G58090 Disease resistance-responsive (dirigent-like protein)
family protein		 0.62 0.31 -0.32
27 AT4G08470 MAPK/ERK kinase kinase 3 MAPKKK10, MAPK/ERK kinase kinase 3 0.62 0.32 -0.3
28 AT4G38560 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.62 0.31 -0.3
29 AT5G10760 Eukaryotic aspartyl protease family protein 0.62 0.31 -0.3
30 AT1G70250 receptor serine/threonine kinase, putative 0.61 0.33 -0.31
31 AT1G08450 calreticulin 3 A. thaliana calreticulin 3,
calreticulin 3, EMS-MUTAGENIZED
BRI1 SUPPRESSOR 2, PRIORITY IN
SWEET LIFE 1		 0.61 0.29 -0.3
32 AT3G45290 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 3,
MILDEW RESISTANCE LOCUS O 3		 0.61 0.32 -0.32
33 AT1G21130 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 4		 0.61 0.34 -0.32
34 AT3G22231 pathogen and circadian controlled 1 PATHOGEN AND CIRCADIAN CONTROLLED
1		 0.61 0.34 -0.33
35 AT1G79660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16170.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.6 0.33 -0.29
36 AT1G59620 Disease resistance protein (CC-NBS-LRR class) family CW9 0.6 0.3 -0.31
37 AT4G12590 Protein of unknown function DUF106, transmembrane -0.6 0.31 -0.32
38 AT1G24340 FAD/NAD(P)-binding oxidoreductase family protein EMBRYO DEFECTIVE 2421, EMBRYO
DEFECTIVE 260		 -0.6 0.32 -0.32
39 AT4G23610 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.6 0.31 -0.31
40 AT3G48650 pseudogene, At14a-related protein, similar to At14a
(GI:11994571 and GI:11994573) (Arabidopsis thaliana)		 0.6 0.32 -0.32
41 AT1G16500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits
to 134 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.33 -0.3
42 AT1G55910 zinc transporter 11 precursor zinc transporter 11 precursor 0.6 0.3 -0.34
43 AT5G11610 Exostosin family protein 0.6 0.33 -0.35
44 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.33 -0.32
45 AT5G47080 casein kinase II beta chain 1 casein kinase II beta chain 1 -0.59 0.31 -0.31
46 AT2G40130 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 0.59 0.32 -0.33
47 AT3G47480 Calcium-binding EF-hand family protein 0.59 0.32 -0.31
48 AT5G64800 CLAVATA3/ESR-RELATED 21 CLAVATA3/ESR-RELATED 21 0.58 0.32 -0.33
49 AT3G49370 Calcium-dependent protein kinase (CDPK) family protein 0.58 0.3 -0.32
50 AT5G53370 pectin methylesterase PCR fragment F PECTIN METHYLESTERASE PCR FRAGMENT
F, pectin methylesterase PCR
fragment F		 0.58 0.3 -0.31
51 AT1G51920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED
DURING: 4 anthesis; Has 22 Blast hits to 22 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.34 -0.33
52 AT3G19500 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.57 0.29 -0.32
53 AT4G14940 amine oxidase 1 amine oxidase 1, amine oxidase 1 -0.57 0.33 -0.3
54 AT1G74440 Protein of unknown function (DUF962) 0.57 0.32 -0.32
55 AT4G23880 unknown protein; Has 73 Blast hits to 69 proteins in 22
species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2;
Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 0.57 0.32 -0.31
56 AT1G58470 RNA-binding protein 1 RNA-binding protein 1, RNA-binding
protein 1		 -0.57 0.33 -0.33
57 AT4G17510 ubiquitin C-terminal hydrolase 3 ubiquitin C-terminal hydrolase 3 -0.56 0.31 -0.31
58 AT3G62100 indole-3-acetic acid inducible 30 indole-3-acetic acid inducible 30 -0.56 0.32 -0.32
59 AT2G17470 Aluminium activated malate transporter family protein ALuminium activated Malate
Transporter 6, AtALMT6		 0.56 0.33 -0.29
60 AT2G27460 sec23/sec24 transport family protein -0.56 0.32 -0.3
61 AT2G02470 alfin-like 6 alfin-like 6 -0.56 0.33 -0.3
62 AT5G24530 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 DOWNY MILDEW RESISTANT 6 0.55 0.3 -0.3
63 AT3G13200 Cwf15 / Cwc15 cell cycle control family protein EMBRYO DEFECTIVE 2769 -0.55 0.31 -0.3
64 AT4G08190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.55 0.32 -0.32
65 AT2G18660 plant natriuretic peptide A AtPNP-A, plant natriuretic peptide
A		 0.55 0.3 -0.31
66 AT2G45640 SIN3 associated polypeptide P18 SIN3 ASSOCIATED POLYPEPTIDE 18,
SIN3 associated polypeptide P18		 -0.55 0.32 -0.32
67 AT3G20870 ZIP metal ion transporter family zinc transporter 29 -0.55 0.32 -0.33
68 AT1G64710 GroES-like zinc-binding dehydrogenase family protein 0.55 0.32 -0.3
69 AT1G76960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 8 growth stages; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.55 0.32 -0.3
70 AT4G31330 Protein of unknown function, DUF599 0.55 0.3 -0.32
71 AT2G35430 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.55 0.31 -0.31
72 AT1G17510 unknown protein; Has 11 Blast hits to 11 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.3 -0.32
73 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.54 0.31 -0.32
74 AT3G15050 IQ-domain 10 IQ-domain 10 0.54 0.31 -0.34
75 AT2G20060 Ribosomal protein L4/L1 family -0.54 0.31 -0.3
76 AT1G32400 tobamovirus multiplication 2A tobamovirus multiplication 2A -0.54 0.3 -0.32
77 AT1G35230 arabinogalactan protein 5 arabinogalactan protein 5 0.54 0.33 -0.34
78 AT1G01560 MAP kinase 11 MAP kinase 11, MAP kinase 11 0.54 0.32 -0.3
79 AT3G29732 transposable element gene 0.54 0.3 -0.3
80 AT1G14260 RING/FYVE/PHD zinc finger superfamily protein 0.54 0.32 -0.31
81 AT2G33000 ubiquitin-associated (UBA)/TS-N domain-containing
protein-related		 0.53 0.31 -0.31
82 AT5G36290 Uncharacterized protein family (UPF0016) -0.53 0.31 -0.31
83 AT3G11740 Protein of unknown function (DUF567) 0.53 0.33 -0.33
84 AT2G43190 ribonuclease P family protein -0.53 0.31 -0.3
85 AT2G44050 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase /
lumazine synthase / riboflavin synthase		 COI1 SUPPRESSOR1, coronatine
insensitive1 suppressor		 -0.53 0.33 -0.29
86 AT3G29330 unknown protein; INVOLVED IN: biological_process unknown;
EXPRESSED IN: stem, embryo; EXPRESSED DURING: D bilateral
stage.		 -0.53 0.35 -0.33
87 AT4G34110 poly(A) binding protein 2 ARABIDOPSIS POLY(A) BINDING 2,
poly(A) binding protein 2, POLY(A)
BINDING PROTEIN 2		 -0.52 0.34 -0.32
88 AT5G38480 general regulatory factor 3 general regulatory factor 3, RCI1 -0.5 0.29 -0.32
89 AT5G50320 radical SAM domain-containing protein / GCN5-related
N-acetyltransferase (GNAT) family protein		 Elongator protein 3,
enhancer-of-asymmetric leaves-two
1, ELONGATA 3, Elongator protein
3, HISTONE ACETYLTRANSFERASE 8,
HISTONE ACETYLTRANSFERASE OF THE
GNAT FAMILY 3		 -0.5 0.31 -0.31
90 AT5G03530 RAB GTPase homolog C2A ATRAB, ATRAB ALPHA, ATRAB18B,
ARABIDOPSIS THALIANA RAB GTPASE
HOMOLOG C2A, RAB GTPase homolog
C2A		 -0.5 0.31 -0.31
91 AT3G24800 proteolysis 1 proteolysis 1 -0.5 0.3 -0.3
92 AT5G66660 Protein of unknown function (DUF677) -0.5 0.3 -0.31
93 AT4G17245 RING/U-box superfamily protein -0.49 0.28 -0.32
94 AT3G57510 Pectin lyase-like superfamily protein ADPG1 -0.49 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0138 Linarin - - - -0.69 0.44 -0.45
96 C0143 Maltitol - - starch degradation II 0.69 0.44 -0.44
97 C0146 Mannitol D-Mannitol Mannitol mannitol degradation II 0.64 0.45 -0.48 C0146
98 C0108 GMP - GMP guanine and guanosine salvage II,
guanosine nucleotides degradation I,
guanosine nucleotides degradation II,
guanine and guanosine salvage III,
purine nucleotides de novo biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification) 		0.58 0.45 -0.44 C0108