AT2G40660 : -
Query Information
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AGICode AT2G40660
Description Nucleic acid-binding, OB-fold-like protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G40660 Nucleic acid-binding, OB-fold-like protein 1 0.31 -0.32
2 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 0.85 0.32 -0.32
3 AT3G18600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.85 0.33 -0.32
4 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.82 0.31 -0.34
5 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.82 0.32 -0.33
6 AT4G32720 La protein 1 La protein 1, La protein 1 0.82 0.31 -0.33
7 AT4G31460 Ribosomal L28 family 0.82 0.32 -0.31
8 AT1G64880 Ribosomal protein S5 family protein 0.81 0.31 -0.3
9 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.81 0.32 -0.32
10 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.8 0.34 -0.33
11 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.8 0.31 -0.32
12 AT3G56070 rotamase cyclophilin 2 rotamase cyclophilin 2 0.79 0.32 -0.31
13 AT2G19385 zinc ion binding 0.79 0.32 -0.31
14 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.33 -0.33
15 AT5G16070 TCP-1/cpn60 chaperonin family protein 0.78 0.31 -0.31
16 AT1G20410 Pseudouridine synthase family protein 0.78 0.34 -0.3
17 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.78 0.31 -0.34
18 AT1G73740 UDP-Glycosyltransferase superfamily protein -0.77 0.31 -0.29
19 AT1G60080 3'-5'-exoribonuclease family protein 0.77 0.33 -0.31
20 AT1G23410 Ribosomal protein S27a / Ubiquitin family protein 0.77 0.31 -0.3
21 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.76 0.33 -0.3
22 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 0.76 0.32 -0.33
23 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1		 -0.76 0.31 -0.3
24 AT2G21510 DNAJ heat shock N-terminal domain-containing protein -0.76 0.31 -0.31
25 AT5G18640 alpha/beta-Hydrolases superfamily protein -0.76 0.33 -0.32
26 AT5G02530 RNA-binding (RRM/RBD/RNP motifs) family protein 0.76 0.31 -0.33
27 AT2G40435 BEST Arabidopsis thaliana protein match is: transcription
regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.76 0.33 -0.31
28 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 -0.76 0.32 -0.32
29 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.76 0.32 -0.33
30 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 -0.76 0.33 -0.3
31 AT1G13730 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.76 0.35 -0.29
32 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.76 0.32 -0.31
33 AT1G24280 glucose-6-phosphate dehydrogenase 3 glucose-6-phosphate dehydrogenase
3		 0.75 0.31 -0.34
34 AT3G59670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits
to 77 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.75 0.32 -0.32
35 AT5G54370 Late embryogenesis abundant (LEA) protein-related 0.75 0.29 -0.28
36 AT5G49560 Putative methyltransferase family protein 0.75 0.31 -0.33
37 AT2G47790 Transducin/WD40 repeat-like superfamily protein 0.74 0.31 -0.3
38 AT2G14460 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.74 0.32 -0.31
39 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10		 -0.74 0.3 -0.34
40 AT5G64100 Peroxidase superfamily protein 0.74 0.32 -0.3
41 AT4G11570 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.74 0.31 -0.3
42 AT5G65860 ankyrin repeat family protein 0.74 0.32 -0.3
43 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein		 -0.73 0.33 -0.3
44 AT1G36380 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; Has 14 Blast hits to 14 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.29 -0.31
45 AT3G09890 Ankyrin repeat family protein 0.73 0.32 -0.3
46 AT5G15610 Proteasome component (PCI) domain protein 0.73 0.32 -0.32
47 AT5G01820 serine/threonine protein kinase 1 ATCIPK14, serine/threonine protein
kinase 1, CBL-INTERACTING PROTEIN
KINASE 14, SOS2-like protein
kinase 24, SNF1-RELATED PROTEIN
KINASE 3.15, serine/threonine
protein kinase 1		 -0.73 0.31 -0.33
48 AT3G19620 Glycosyl hydrolase family protein -0.73 0.33 -0.3
49 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.73 0.34 -0.32
50 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 -0.73 0.31 -0.3
51 AT5G19040 isopentenyltransferase 5 Arabidopsis thaliana
ISOPENTENYLTRANSFERASE 5,
isopentenyltransferase 5		 0.73 0.33 -0.32
52 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.72 0.31 -0.31
53 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases 0.72 0.32 -0.32
54 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 -0.72 0.31 -0.31
55 AT5G56950 nucleosome assembly protein 1;3 nucleosome assembly protein 1;3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 03,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A3		 0.72 0.33 -0.3
56 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 0.72 0.31 -0.3
57 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.72 0.32 -0.31
58 AT4G25090 Riboflavin synthase-like superfamily protein 0.72 0.3 -0.3
59 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 -0.72 0.31 -0.32
60 AT3G20490 unknown protein; Has 754 Blast hits to 165 proteins in 64
species: Archae - 0; Bacteria - 48; Metazoa - 26; Fungi -
25; Plants - 36; Viruses - 0; Other Eukaryotes - 619
(source: NCBI BLink).		 0.72 0.31 -0.32
61 AT2G40460 Major facilitator superfamily protein -0.72 0.32 -0.31
62 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2		 -0.72 0.31 -0.28
63 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE 0.72 0.31 -0.31
64 AT4G30840 Transducin/WD40 repeat-like superfamily protein 0.72 0.33 -0.3
65 AT5G52380 VASCULAR-RELATED NAC-DOMAIN 6 0.71 0.31 -0.33
66 AT5G02290 Protein kinase superfamily protein NAK -0.71 0.3 -0.31
67 AT2G01900 DNAse I-like superfamily protein 0.71 0.33 -0.29
68 AT3G54650 RNI-like superfamily protein FBL17 0.71 0.3 -0.31
69 AT1G28230 purine permease 1 ATPUP1, purine permease 1 -0.71 0.31 -0.31
70 AT2G23430 Cyclin-dependent kinase inhibitor family protein ICK1, KIP-RELATED PROTEIN 1 -0.71 0.33 -0.31
71 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.32 -0.31
72 AT1G37000 Beta-galactosidase related protein -0.7 0.31 -0.33
73 AT1G68600 Aluminium activated malate transporter family protein -0.7 0.33 -0.33
74 AT5G54060 UDP-glucose:flavonoid 3-o-glucosyltransferase UDP-glucose:flavonoid
3-o-glucosyltransferase		 -0.7 0.32 -0.31
75 AT5G42800 dihydroflavonol 4-reductase dihydroflavonol 4-reductase, M318,
TT3		 -0.7 0.33 -0.33
76 AT2G32800 protein kinase family protein AP4.3A -0.7 0.34 -0.31
77 AT5G57815 Cytochrome c oxidase, subunit Vib family protein -0.7 0.33 -0.34
78 AT5G65840 Thioredoxin superfamily protein -0.7 0.29 -0.32
79 AT5G48370 Thioesterase/thiol ester dehydrase-isomerase superfamily
protein		 -0.7 0.3 -0.3
80 AT4G11960 PGR5-like B PGR5-like B -0.7 0.34 -0.33
81 AT2G20740 Tetraspanin family protein -0.7 0.33 -0.31
82 AT2G31800 Integrin-linked protein kinase family -0.7 0.31 -0.33
83 AT1G66090 Disease resistance protein (TIR-NBS class) -0.69 0.31 -0.33
84 AT5G40170 receptor like protein 54 receptor like protein 54, receptor
like protein 54		 -0.69 0.3 -0.32
85 AT5G23180 BEST Arabidopsis thaliana protein match is: DNA-binding
storekeeper protein-related transcriptional regulator
(TAIR:AT4G01260.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.69 0.3 -0.32
86 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.69 0.32 -0.3
87 AT4G33040 Thioredoxin superfamily protein -0.69 0.34 -0.33
88 AT1G64970 gamma-tocopherol methyltransferase gamma-tocopherol
methyltransferase, TMT1, VITAMIN E
DEFICIENT 4		 -0.69 0.31 -0.32
89 AT1G55280 Lipase/lipooxygenase, PLAT/LH2 family protein -0.69 0.33 -0.33
90 AT2G43430 glyoxalase 2-1 glyoxalase 2-1, GLYOXALASE II -0.69 0.31 -0.33
91 AT4G14090 UDP-Glycosyltransferase superfamily protein -0.68 0.31 -0.3
92 AT1G36980 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0220
(InterPro:IPR007919); Has 424 Blast hits to 424 proteins in
159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi
- 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 -0.68 0.31 -0.33
93 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 -0.68 0.3 -0.32
94 AT5G02600 Heavy metal transport/detoxification superfamily protein SODIUM POTASSIUM ROOT DEFECTIVE 1,
nuclear-enriched phloem companion
cell gene 6		 -0.68 0.29 -0.33
95 AT2G32090 Lactoylglutathione lyase / glyoxalase I family protein -0.68 0.31 -0.32
96 AT1G50740 Transmembrane proteins 14C -0.68 0.3 -0.33
97 AT1G36370 serine hydroxymethyltransferase 7 serine hydroxymethyltransferase 7 -0.68 0.33 -0.33
98 AT1G47765 F-box and associated interaction domains-containing protein -0.67 0.35 -0.29
99 AT4G17470 alpha/beta-Hydrolases superfamily protein -0.67 0.33 -0.31
100 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 -0.67 0.3 -0.33
101 AT3G21360 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.67 0.33 -0.33
102 AT2G29410 metal tolerance protein B1 ATMTPB1, metal tolerance protein
B1		 -0.67 0.32 -0.36
103 AT5G37300 O-acyltransferase (WSD1-like) family protein WSD1 -0.67 0.29 -0.34
104 AT1G50020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 72 Blast hits to 72 proteins in 27 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.32 -0.31
105 AT1G68570 Major facilitator superfamily protein -0.67 0.32 -0.34
106 AT4G23990 cellulose synthase like G3 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE-LIKE G3, cellulose
synthase like G3		 -0.67 0.31 -0.33
107 AT4G15440 hydroperoxide lyase 1 CYP74B2, hydroperoxide lyase 1 -0.67 0.33 -0.33
108 AT4G10730 Protein kinase superfamily protein -0.67 0.3 -0.33
109 AT5G20900 jasmonate-zim-domain protein 12 jasmonate-zim-domain protein 12,
TIFY3B		 -0.67 0.32 -0.32
110 AT2G20960 Arabidopsis phospholipase-like protein (PEARLI 4) family pEARLI4 -0.67 0.31 -0.33
111 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.67 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
112 C0070 Cyanidin 3-O-[2''-O-(2'''-O-(sinapoyl)xylosyl) 6''-O-(p-O-coumaroyl) glucoside] 5-O-[6''''-O-(malonyl) glucoside] - - - -0.73 0.46 -0.47
113 C0072 Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-glucoside - - - -0.72 0.45 -0.45