AT2G18790 : HY3
Query Information
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AGICode AT2G18790
Description phytochrome B
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G18790 phytochrome B HY3, OUT OF PHASE 1, phytochrome B 1 0.33 -0.34
2 AT2G46420 Plant protein 1589 of unknown function 0.72 0.31 -0.31
3 AT5G51010 Rubredoxin-like superfamily protein 0.67 0.31 -0.29
4 AT5G37310 Endomembrane protein 70 protein family 0.65 0.33 -0.33
5 AT4G16360 5'-AMP-activated protein kinase beta-2 subunit protein 0.65 0.32 -0.32
6 AT1G11200 Protein of unknown function (DUF300) 0.64 0.32 -0.33
7 AT1G32540 lsd one like 1 lsd one like 1 0.63 0.31 -0.31
8 AT3G57785 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits
to 121 proteins in 51 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.62 0.32 -0.31
9 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 0.61 0.33 -0.34
10 AT5G03555 permease, cytosine/purines, uracil, thiamine, allantoin
family protein		 0.61 0.32 -0.32
11 AT5G23190 cytochrome P450, family 86, subfamily B, polypeptide 1 cytochrome P450, family 86,
subfamily B, polypeptide 1		 -0.61 0.33 -0.3
12 AT1G13460 Protein phosphatase 2A regulatory B subunit family protein 0.6 0.32 -0.32
13 AT5G11080 Ubiquitin-like superfamily protein 0.6 0.31 -0.31
14 AT1G01110 IQ-domain 18 IQ-domain 18 -0.6 0.32 -0.31
15 AT4G02890 Ubiquitin family protein UBQ14 0.6 0.31 -0.31
16 AT5G47490 RGPR-related 0.6 0.34 -0.3
17 AT1G01060 Homeodomain-like superfamily protein LATE ELONGATED HYPOCOTYL, LATE
ELONGATED HYPOCOTYL 1		 0.59 0.31 -0.31
18 AT3G29792 transposable element gene 0.59 0.31 -0.32
19 AT4G33180 alpha/beta-Hydrolases superfamily protein 0.59 0.3 -0.33
20 AT3G03290 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.59 0.31 -0.36
21 AT2G48150 glutathione peroxidase 4 glutathione peroxidase 4,
glutathione peroxidase 4		 -0.58 0.31 -0.3
22 AT1G31780 CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex
COG6 (InterPro:IPR010490); Has 384 Blast hits to 379
proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa
- 151; Fungi - 156; Plants - 42; Viruses - 0; Other
Eukaryotes - 31 (source: NCBI BLink).		 0.58 0.31 -0.31
23 AT1G07520 GRAS family transcription factor -0.57 0.3 -0.33
24 AT2G05170 vacuolar protein sorting 11 vacuolar protein sorting 11,
vacuolar protein sorting 11		 0.57 0.31 -0.29
25 AT1G33265 Transmembrane proteins 14C 0.57 0.34 -0.31
26 AT1G13140 cytochrome P450, family 86, subfamily C, polypeptide 3 cytochrome P450, family 86,
subfamily C, polypeptide 3		 0.57 0.3 -0.31
27 AT1G14510 alfin-like 7 alfin-like 7 0.57 0.31 -0.33
28 AT1G33340 ENTH/ANTH/VHS superfamily protein -0.57 0.31 -0.32
29 AT5G56980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.56 0.3 -0.31
30 AT3G50960 phosducin-like protein 3 homolog phosducin-like protein 3 homolog -0.56 0.33 -0.31
31 AT5G47280 ADR1-like 3 ADR1-like 3 0.56 0.33 -0.32
32 AT5G08630 DDT domain-containing protein -0.56 0.32 -0.32
33 AT4G28703 RmlC-like cupins superfamily protein -0.56 0.32 -0.33
34 AT2G03520 ureide permease 4 ureide permease 4, ureide permease
4		 0.55 0.33 -0.3
35 AT3G14650 cytochrome P450, family 72, subfamily A, polypeptide 11 cytochrome P450, family 72,
subfamily A, polypeptide 11		 0.55 0.32 -0.31
36 AT4G08380 Proline-rich extensin-like family protein -0.55 0.32 -0.32
37 AT5G18250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G04040.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.55 0.31 -0.32
38 AT5G07070 CBL-interacting protein kinase 2 CBL-interacting protein kinase 2,
SNF1-RELATED PROTEIN KINASE 3.2		 -0.55 0.31 -0.3
39 AT5G35150 transposable element gene 0.55 0.33 -0.31
40 AT2G19210 Leucine-rich repeat transmembrane protein kinase protein 0.55 0.31 -0.31
41 AT5G39880 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G28750.1); Has 25 Blast hits to 25 proteins in 3
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.33 -0.33
42 AT4G11510 ralf-like 28 ralf-like 28 0.54 0.33 -0.34
43 AT5G01950 Leucine-rich repeat protein kinase family protein -0.54 0.32 -0.32
44 AT3G19380 plant U-box 25 plant U-box 25 -0.54 0.31 -0.31
45 AT4G37260 myb domain protein 73 ATMYB73, myb domain protein 73 -0.54 0.3 -0.32
46 AT2G37210 lysine decarboxylase family protein LONELY GUY 3 -0.53 0.31 -0.3
47 AT5G11710 ENTH/VHS family protein 0.53 0.31 -0.33
48 AT1G63910 myb domain protein 103 myb domain protein 103, myb domain
protein 103		 0.53 0.32 -0.31
49 AT1G66470 ROOT HAIR DEFECTIVE6 AtRHD6, ROOT HAIR DEFECTIVE6 -0.52 0.3 -0.3
50 AT2G01080 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.52 0.32 -0.3
51 AT1G03700 Uncharacterised protein family (UPF0497) -0.52 0.33 -0.3
52 AT2G16410 transposable element gene -0.52 0.32 -0.34
53 AT1G75800 Pathogenesis-related thaumatin superfamily protein -0.52 0.3 -0.32
54 AT3G56250 unknown protein; Has 109 Blast hits to 83 proteins in 41
species: Archae - 0; Bacteria - 6; Metazoa - 18; Fungi -
20; Plants - 21; Viruses - 0; Other Eukaryotes - 44
(source: NCBI BLink).		 -0.51 0.34 -0.33
55 AT5G63130 Octicosapeptide/Phox/Bem1p family protein -0.51 0.33 -0.3
56 AT1G08500 early nodulin-like protein 18 AtENODL18, early nodulin-like
protein 18		 -0.51 0.31 -0.34
57 AT1G75920 GDSL-like Lipase/Acylhydrolase superfamily protein -0.5 0.29 -0.31
58 AT3G07650 CONSTANS-like 9 CONSTANS-like 9 -0.49 0.31 -0.33
59 AT4G10925 Nuclear transport factor 2 (NTF2) family protein -0.49 0.31 -0.31
60 AT1G10810 NAD(P)-linked oxidoreductase superfamily protein -0.49 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
61 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - -0.86 0.5 -0.5 C0241
62 C0208 Phosphatidylinositol-34:2 - Phosphatidylinositol-34:2 3-phosphoinositide biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
sphingolipid biosynthesis,
linoleate biosynthesis I,
cutin biosynthesis,
glycerophosphodiester degradation,
phosphate acquisition,
glutathione redox reactions I 		-0.73 0.49 -0.47 C0208
63 C0081 Digalactosyldiacylglycerol-36:2 - Digalactosyldiacylglycerol-36:2 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.73 0.49 -0.47 C0081
64 C0197 Phosphatidylcholine-36:1 - Phosphatidylcholine-36:1 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		-0.71 0.48 -0.5 C0197
65 C0084 Digalactosyldiacylglycerol-36:5 - Digalactosyldiacylglycerol-36:5 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.69 0.52 -0.52 C0084
66 C0085 Digalactosyldiacylglycerol-36:6 - Digalactosyldiacylglycerol-36:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.67 0.48 -0.49 C0085
67 C0238 Sitosterol 3-O-β-D-glucoside - 3-O-β-D-Glucosyl-β-sitosterol sphingolipid biosynthesis -0.64 0.34 -0.32 C0238
68 C0064 Campesterol 3-O-β-D-glucoside - - - -0.6 0.34 -0.33
69 C0076 Digalactosyldiacylglycerol-34:1 - Digalactosyldiacylglycerol-34:1 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.5 0.33 -0.32