AT2G18640 : geranylgeranyl pyrophosphate synthase 4
Query Information
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AGICode AT2G18640
Description geranylgeranyl pyrophosphate synthase 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G18640 geranylgeranyl pyrophosphate synthase 4 geranylgeranyl pyrophosphate
synthase 4		 1 0.3 -0.32
2 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.7 0.3 -0.31
3 AT3G02670 Glycine-rich protein family 0.65 0.31 -0.32
4 AT2G07000 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.32 -0.34
5 AT3G58280 Arabidopsis phospholipase-like protein (PEARLI 4) with
TRAF-like domain		 -0.64 0.33 -0.32
6 AT3G47660 Regulator of chromosome condensation (RCC1) family protein 0.64 0.32 -0.3
7 AT5G49945 Protein of unknown function (DUF1682) 0.64 0.31 -0.29
8 AT3G47460 Structural maintenance of chromosomes (SMC) family protein ATSMC2 -0.64 0.31 -0.3
9 AT2G26350 peroxin 10 ATPEX10, peroxin 10 -0.63 0.3 -0.32
10 AT3G29690 HXXXD-type acyl-transferase family protein 0.63 0.3 -0.31
11 AT1G36150 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.31 -0.33
12 AT1G48980 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.62 0.31 -0.33
13 AT3G04280 response regulator 22 response regulator 22, response
regulator 22		 0.62 0.34 -0.31
14 AT4G30570 Glucose-1-phosphate adenylyltransferase family protein -0.62 0.31 -0.3
15 AT5G05310 TLC ATP/ADP transporter -0.62 0.31 -0.3
16 AT3G55020 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.62 0.3 -0.31
17 AT5G56320 expansin A14 ATEXP14, expansin A14, ATHEXP
ALPHA 1.5, EXPANSIN 14, expansin
A14		 0.62 0.32 -0.3
18 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.61 0.32 -0.31
19 AT4G25590 actin depolymerizing factor 7 actin depolymerizing factor 7 -0.61 0.33 -0.33
20 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 -0.61 0.3 -0.34
21 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 -0.61 0.31 -0.31
22 AT3G29640 transposable element gene 0.61 0.3 -0.31
23 AT5G59190 subtilase family protein -0.6 0.3 -0.33
24 AT1G04500 CCT motif family protein -0.6 0.29 -0.31
25 AT5G53360 TRAF-like superfamily protein -0.6 0.3 -0.33
26 AT2G15860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.6 0.32 -0.3
27 AT5G08500 Transmembrane CLPTM1 family protein -0.6 0.31 -0.31
28 AT5G35430 Tetratricopeptide repeat (TPR)-like superfamily protein 0.6 0.29 -0.32
29 AT3G28170 unknown protein; Has 2 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.31 -0.32
30 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 0.59 0.31 -0.32
31 AT3G52490 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 -0.59 0.29 -0.31
32 AT5G38140 nuclear factor Y, subunit C12 nuclear factor Y, subunit C12 -0.59 0.31 -0.32
33 AT2G13750 transposable element gene -0.58 0.33 -0.29
34 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein -0.58 0.3 -0.31
35 AT2G28710 C2H2-type zinc finger family protein 0.58 0.32 -0.32
36 AT1G31000 F-box and associated interaction domains-containing protein -0.58 0.33 -0.32
37 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.34 -0.31
38 AT2G42370 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58110.2); Has 205 Blast hits
to 191 proteins in 60 species: Archae - 3; Bacteria - 23;
Metazoa - 73; Fungi - 8; Plants - 34; Viruses - 0; Other
Eukaryotes - 64 (source: NCBI BLink).		 -0.58 0.31 -0.28
39 AT3G19610 Plant protein of unknown function (DUF936) 0.58 0.31 -0.31
40 AT3G06560 poly(A) polymerase 3 poly(A) polymerase 3 0.58 0.3 -0.29
41 AT1G05360 BEST Arabidopsis thaliana protein match is: SNARE
associated Golgi protein family (TAIR:AT4G14950.1); Has 332
Blast hits to 326 proteins in 115 species: Archae - 0;
Bacteria - 11; Metazoa - 174; Fungi - 0; Plants - 74;
Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).		 Killing Me Slowly 2 -0.57 0.31 -0.31
42 AT1G57906 unknown protein; BEST Arabidopsis thaliana protein match
is: F-box family protein with a domain of unknown function
(DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.57 0.32 -0.31
43 AT1G58330 transcription factor-related ZW2 0.57 0.29 -0.33
44 AT2G22160 Cysteine proteinases superfamily protein -0.57 0.33 -0.29
45 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 0.57 0.32 -0.32
46 AT1G23830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G23840.1); Has 57 Blast hits to 52 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.31 -0.3
47 AT2G43270 F-box and associated interaction domains-containing protein 0.57 0.31 -0.31
48 AT2G27980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.57 0.32 -0.31
49 AT3G27540 beta-1,4-N-acetylglucosaminyltransferase family protein -0.57 0.32 -0.31
50 AT3G26085 CAAX amino terminal protease family protein -0.56 0.31 -0.3
51 AT2G04230 FBD, F-box and Leucine Rich Repeat domains containing
protein		 -0.56 0.32 -0.34
52 AT2G31700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.32 -0.34
53 AT5G22720 F-box/RNI-like superfamily protein -0.56 0.31 -0.33
54 AT1G60530 Dynamin related protein 4A Dynamin related protein 4A -0.56 0.33 -0.3
55 AT1G44060 transposable element gene 0.56 0.33 -0.31
56 AT3G59410 protein kinase family protein ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 2, GENERAL
CONTROL NON-REPRESSIBLE 2		 -0.56 0.3 -0.33
57 AT3G43730 transposable element gene -0.56 0.31 -0.31
58 AT3G16730 CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex,
subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to
211 proteins in 82 species: Archae - 0; Bacteria - 0;
Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 hypersensitive to excess boron 2 0.56 0.31 -0.32
59 AT4G02300 Plant invertase/pectin methylesterase inhibitor superfamily -0.55 0.3 -0.3
60 AT1G31600 RNA-binding (RRM/RBD/RNP motifs) family protein Arabidopsis thaliana tRNA
methyltransferase 9, tRNA
methyltransferase 9		 -0.55 0.31 -0.31
61 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 0.55 0.32 -0.33
62 AT3G09880 Protein phosphatase 2A regulatory B subunit family protein ATB' BETA -0.55 0.34 -0.34
63 AT3G31920 transposable element gene -0.55 0.3 -0.33
64 AT3G09960 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.54 0.3 -0.3
65 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein -0.54 0.28 -0.31
66 AT1G71490 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.33 -0.31
67 AT4G05140 Nucleoside transporter family protein 0.54 0.31 -0.32
68 AT5G47250 LRR and NB-ARC domains-containing disease resistance
protein		 -0.54 0.32 -0.31
69 AT5G50200 nitrate transmembrane transporters ATNRT3.1, NITRATE TRANSPORTER 3.1,
WOUND-RESPONSIVE 3		 0.54 0.33 -0.3
70 AT3G50120 Plant protein of unknown function (DUF247) 0.54 0.3 -0.34
71 AT3G25450 transposable element gene -0.54 0.32 -0.29
72 AT1G27520 Glycosyl hydrolase family 47 protein -0.54 0.32 -0.31
73 AT1G23880 NHL domain-containing protein -0.53 0.31 -0.3
74 AT1G31070 N-acetylglucosamine-1-phosphate uridylyltransferase 1 N-acetylglucosamine-1-phosphate
uridylyltransferase 1		 0.53 0.31 -0.32
75 AT1G01740 Protein kinase protein with tetratricopeptide repeat domain -0.53 0.31 -0.31
76 AT4G33180 alpha/beta-Hydrolases superfamily protein -0.53 0.33 -0.32
77 AT4G28000 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.53 0.3 -0.32
78 AT2G22620 Rhamnogalacturonate lyase family protein -0.53 0.32 -0.31
79 AT2G17770 basic region/leucine zipper motif 27 basic region/leucine zipper motif
27, basic region/leucine zipper
motif 27, FD PARALOG		 0.52 0.34 -0.29
80 AT4G24630 DHHC-type zinc finger family protein -0.52 0.36 -0.29
81 AT3G27980 Plant invertase/pectin methylesterase inhibitor superfamily 0.52 0.29 -0.33
82 AT3G03400 EF hand calcium-binding protein family 0.52 0.32 -0.33
83 AT1G62890 transposable element gene -0.52 0.31 -0.32
84 AT2G33680 Tetratricopeptide repeat (TPR)-like superfamily protein 0.52 0.31 -0.31
85 AT1G79840 HD-ZIP IV family of homeobox-leucine zipper protein with
lipid-binding START domain		 GLABRA 2 0.52 0.3 -0.31
86 AT3G49640 Aldolase-type TIM barrel family protein -0.52 0.32 -0.32
87 AT3G48030 hypoxia-responsive family protein / zinc finger (C3HC4-type
RING finger) family protein		 0.52 0.33 -0.29
88 AT1G65670 cytochrome P450, family 702, subfamily A, polypeptide 1 cytochrome P450, family 702,
subfamily A, polypeptide 1		 -0.52 0.32 -0.3
89 AT1G17000 trehalose-phosphatase/synthase 3 trehalose-phosphatase/synthase 3,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S3, trehalose-phosphatase/synthase
3		 -0.52 0.31 -0.31
90 AT1G75940 Glycosyl hydrolase superfamily protein ATA27, BETA GLUCOSIDASE 20 0.51 0.31 -0.3
91 AT2G27250 CLAVATA3 AtCLV3, CLAVATA3 0.51 0.32 -0.33
92 AT3G16220 Predicted eukaryotic LigT -0.51 0.31 -0.32
93 AT3G44580 BEST Arabidopsis thaliana protein match is: Arabidopsis
retrotransposon ORF-1 protein (TAIR:AT2G14000.1); Has 12
Blast hits to 12 proteins in 2 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.51 0.33 -0.3
94 AT2G02630 Cysteine/Histidine-rich C1 domain family protein -0.51 0.29 -0.3
95 AT1G08500 early nodulin-like protein 18 AtENODL18, early nodulin-like
protein 18		 0.51 0.32 -0.3
96 AT3G50050 Eukaryotic aspartyl protease family protein 0.51 0.32 -0.33
97 AT5G28790 transposable element gene -0.51 0.31 -0.3
98 AT5G54570 beta glucosidase 41 beta glucosidase 41 0.5 0.33 -0.31
99 AT3G28345 ABC transporter family protein ATP-binding cassette B15,
multi-drug resistance 13		 0.49 0.31 -0.32
100 AT1G62340 PA-domain containing subtilase family protein ABNORMAL LEAF-SHAPE, ABNORMAL
LEAF-SHAPE 1		 0.49 0.31 -0.3
101 AT1G41770 transposable element gene 0.49 0.33 -0.31