AT2G18740 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G18740
Description Small nuclear ribonucleoprotein family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G18740 Small nuclear ribonucleoprotein family protein 1 0.3 -0.35
2 AT5G10010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64910.1); Has 33260
Blast hits to 16857 proteins in 1270 species: Archae - 88;
Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants -
1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI
BLink).		 0.81 0.31 -0.3
3 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.8 0.29 -0.31
4 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.79 0.3 -0.32
5 AT1G54770 Fcf2 pre-rRNA processing protein 0.79 0.33 -0.32
6 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases 0.79 0.32 -0.32
7 AT4G23540 ARM repeat superfamily protein 0.79 0.31 -0.32
8 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 -0.78 0.33 -0.3
9 AT5G22840 Protein kinase superfamily protein 0.78 0.31 -0.31
10 AT3G55620 Translation initiation factor IF6 eukaryotic initiation facor 6A,
embryo defective 1624		 0.76 0.3 -0.32
11 AT3G53520 UDP-glucuronic acid decarboxylase 1 ATUXS1, UDP-glucuronic acid
decarboxylase 1		 0.76 0.31 -0.32
12 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9		 0.76 0.33 -0.32
13 AT1G22370 UDP-glucosyl transferase 85A5 UDP-glucosyl transferase 85A5,
UDP-glucosyl transferase 85A5		 -0.76 0.31 -0.3
14 AT2G44820 unknown protein; Has 70 Blast hits to 70 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4;
Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 0.75 0.29 -0.32
15 AT4G00740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 QUASIMODO 3 0.75 0.32 -0.32
16 AT5G11630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast
hits to 90 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.31 -0.3
17 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.74 0.31 -0.3
18 AT1G32440 plastidial pyruvate kinase 3 plastidial pyruvate kinase 3 0.74 0.31 -0.34
19 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 -0.74 0.31 -0.32
20 AT1G62540 flavin-monooxygenase glucosinolate S-oxygenase 2 flavin-monooxygenase glucosinolate
S-oxygenase 2		 -0.74 0.33 -0.3
21 AT3G07590 Small nuclear ribonucleoprotein family protein 0.74 0.33 -0.3
22 AT5G43720 Protein of unknown function (DUF2361) 0.74 0.31 -0.33
23 AT5G23300 pyrimidine d pyrimidine d 0.74 0.32 -0.3
24 AT1G16730 unknown protein 6 unknown protein 6 -0.73 0.33 -0.3
25 AT5G58130 RNA-binding (RRM/RBD/RNP motifs) family protein REPRESSOR OF SILENCING 3 0.73 0.32 -0.3
26 AT1G80310 sulfate transmembrane transporters molybdate transporter 2 -0.73 0.32 -0.3
27 AT1G28510 Optic atrophy 3 protein (OPA3) 0.73 0.31 -0.35
28 AT5G44110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette A21,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN, ATPOP1, POP1		 0.73 0.33 -0.33
29 AT1G77940 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.73 0.32 -0.31
30 AT3G12130 KH domain-containing protein / zinc finger (CCCH type)
family protein		 0.73 0.3 -0.32
31 AT1G04810 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 0.72 0.3 -0.29
32 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein -0.72 0.31 -0.31
33 AT2G41110 calmodulin 2 ATCAL5, calmodulin 2 0.72 0.3 -0.32
34 AT4G22200 potassium transport 2/3 AKT2, potassium transport 2/3,
AKT3, potassium transport 2/3		 -0.72 0.31 -0.28
35 AT3G05990 Leucine-rich repeat (LRR) family protein 0.72 0.32 -0.32
36 AT3G44110 DNAJ homologue 3 ATJ, DNAJ homologue 3, J3 0.72 0.31 -0.33
37 AT5G65760 Serine carboxypeptidase S28 family protein -0.72 0.32 -0.33
38 AT5G40590 Cysteine/Histidine-rich C1 domain family protein 0.72 0.32 -0.33
39 AT1G30260 BEST Arabidopsis thaliana protein match is:
Galactosyltransferase family protein (TAIR:AT4G21060.1);
Has 30 Blast hits to 30 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.32 -0.3
40 AT3G25230 rotamase FKBP 1 ATFKBP62, FK506 BINDING PROTEIN
62, rotamase FKBP 1		 0.71 0.3 -0.3
41 AT2G25590 Plant Tudor-like protein -0.71 0.3 -0.33
42 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.33 -0.33
43 AT1G31020 thioredoxin O2 thioredoxin O2, thioredoxin O2 0.71 0.32 -0.33
44 AT4G20890 tubulin beta-9 chain tubulin beta-9 chain 0.71 0.34 -0.34
45 AT3G16230 Predicted eukaryotic LigT -0.71 0.32 -0.33
46 AT5G53770 Nucleotidyltransferase family protein 0.71 0.29 -0.3
47 AT5G60920 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA 0.71 0.32 -0.32
48 AT2G15000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast
hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.31 -0.33
49 AT3G13672 TRAF-like superfamily protein -0.71 0.32 -0.32
50 AT3G46040 ribosomal protein S15A D ribosomal protein S15A D 0.71 0.32 -0.34
51 AT5G11350 DNAse I-like superfamily protein -0.7 0.31 -0.32
52 AT5G05820 Nucleotide-sugar transporter family protein 0.7 0.3 -0.31
53 AT5G14600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.7 0.34 -0.32
54 AT5G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.7 0.35 -0.31
55 AT4G34360 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.7 0.3 -0.31
56 AT3G01150 polypyrimidine tract-binding protein 1 POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1, polypyrimidine
tract-binding protein 1		 0.69 0.33 -0.33
57 AT5G22460 alpha/beta-Hydrolases superfamily protein -0.69 0.32 -0.29
58 AT5G51180 alpha/beta-Hydrolases superfamily protein 0.69 0.33 -0.3
59 AT1G74300 alpha/beta-Hydrolases superfamily protein -0.69 0.32 -0.32
60 AT1G25490 ARM repeat superfamily protein ATB BETA BETA, ENHANCED ETHYLENE
RESPONSE 1, ROOTS CURL IN NPA,
REGA		 0.69 0.32 -0.29
61 AT5G49460 ATP citrate lyase subunit B 2 ATP citrate lyase subunit B 2 0.69 0.3 -0.3
62 AT1G09910 Rhamnogalacturonate lyase family protein -0.69 0.31 -0.31
63 AT3G53500 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32		 0.69 0.31 -0.32
64 AT4G30960 SOS3-interacting protein 3 CBL-INTERACTING PROTEIN KINASE 6,
CBL-INTERACTING PROTEIN KINASE 6,
SOS3-interacting protein 3,
SNF1-RELATED PROTEIN KINASE 3.14		 -0.68 0.33 -0.3
65 AT3G10740 alpha-L-arabinofuranosidase 1 ALPHA-L-ARABINOFURANOSIDASE,
ALPHA-L-ARABINOFURANOSIDASE 1,
alpha-L-arabinofuranosidase 1,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 1		 -0.68 0.31 -0.31
66 AT4G30993 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.67 0.32 -0.32
67 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 -0.66 0.31 -0.33
68 AT4G00750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.66 0.29 -0.28
69 AT5G44310 Late embryogenesis abundant protein (LEA) family protein -0.65 0.31 -0.32
70 AT1G73680 alpha dioxygenase alpha dioxygenase -0.65 0.31 -0.33
71 AT1G15060 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 -0.64 0.32 -0.32
72 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family -0.64 0.3 -0.31
73 AT2G42370 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58110.2); Has 205 Blast hits
to 191 proteins in 60 species: Archae - 3; Bacteria - 23;
Metazoa - 73; Fungi - 8; Plants - 34; Viruses - 0; Other
Eukaryotes - 64 (source: NCBI BLink).		 -0.64 0.31 -0.32
74 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding -0.64 0.32 -0.32
75 AT1G48470 glutamine synthetase 1;5 glutamine synthetase 1;5 -0.63 0.33 -0.34
76 AT5G63800 Glycosyl hydrolase family 35 protein beta-galactosidase 6,
MUCILAGE-MODIFIED 2		 -0.63 0.31 -0.33
77 AT3G62800 double-stranded-RNA-binding protein 4 double-stranded-RNA-binding
protein 4		 -0.63 0.32 -0.31
78 AT4G18975 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.3 -0.31
79 AT3G27820 monodehydroascorbate reductase 4 MONODEHYDROASCORBATE REDUCTASE 4,
monodehydroascorbate reductase 4		 -0.63 0.29 -0.33
80 AT3G57980 DNA-binding bromodomain-containing protein -0.62 0.3 -0.32
81 AT5G47720 Thiolase family protein -0.62 0.33 -0.33
82 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 -0.62 0.34 -0.32
83 AT3G62970 zinc finger (C3HC4-type RING finger) family protein -0.62 0.33 -0.31
84 AT1G54360 TBP-ASSOCIATED FACTOR 6B TBP-ASSOCIATED FACTOR 6B,
TBP-ASSOCIATED FACTOR 6B1,
TBP-ASSOCIATED FACTOR 6B2,
TBP-associated factor 6B4		 -0.62 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
85 C0146 Mannitol D-Mannitol Mannitol mannitol degradation II -0.66 0.44 -0.44 C0146