AT2G40680 : -
Query Information
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AGICode AT2G40680
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G40680 transposable element gene 1 0.32 -0.33
2 AT5G13670 nodulin MtN21 /EamA-like transporter family protein 0.79 0.31 -0.32
3 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 -0.78 0.32 -0.3
4 AT3G43140 transposable element gene 0.76 0.31 -0.32
5 AT3G17290 transposable element gene 0.74 0.32 -0.31
6 AT3G45440 Concanavalin A-like lectin protein kinase family protein 0.74 0.34 -0.31
7 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12		 0.74 0.33 -0.29
8 AT2G46590 Dof-type zinc finger DNA-binding family protein DOF AFFECTING GERMINATION 2 0.74 0.31 -0.34
9 AT5G02410 DIE2/ALG10 family homolog of yeast ALG10 0.73 0.33 -0.3
10 AT5G27080 Transducin family protein / WD-40 repeat family protein AtCDC20.3, cell division cycle
20.3		 0.73 0.33 -0.31
11 AT2G19830 SNF7 family protein SNF7.2, VPS32 -0.73 0.32 -0.34
12 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED 0.71 0.28 -0.29
13 AT3G42220 transposable element gene 0.71 0.29 -0.33
14 AT2G05000 transposable element gene 0.71 0.32 -0.3
15 AT1G69470 unknown protein; Has 6 Blast hits to 6 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.71 0.32 -0.32
16 AT5G40280 Prenyltransferase family protein ARABIDOPSIS THALIANA FARNESYL
TRANSFERASE BETA SUBUNIT, ENHANCED
RESPONSE TO ABA 1, WIGGUM		 -0.7 0.31 -0.3
17 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 -0.7 0.35 -0.3
18 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A -0.7 0.3 -0.31
19 AT1G30550 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.7 0.29 -0.31
20 AT5G27100 glutamate receptor 2.1 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 2.1, glutamate receptor
2.1		 0.7 0.31 -0.32
21 AT2G40220 Integrase-type DNA-binding superfamily protein ABA INSENSITIVE 4, ATABI4, GLUCOSE
INSENSITIVE 6, IMPAIRED SUCROSE
INDUCTION 3, SALOBRENO 5,
SUGAR-INSENSITIVE 5, SUCROSE
UNCOUPLED 6		 0.7 0.31 -0.31
22 AT1G34220 Regulator of Vps4 activity in the MVB pathway protein -0.7 0.3 -0.33
23 AT2G45200 golgi snare 12 ATGOS12, golgi snare 12 -0.7 0.31 -0.3
24 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 0.7 0.32 -0.3
25 AT3G02670 Glycine-rich protein family -0.69 0.3 -0.32
26 AT1G70920 homeobox-leucine zipper protein 18 homeobox-leucine zipper protein
18, homeobox-leucine zipper
protein 18		 -0.69 0.3 -0.32
27 AT3G09085 Protein of unknown function (DUF962) -0.69 0.32 -0.31
28 AT5G34870 zinc knuckle (CCHC-type) family protein 0.69 0.31 -0.31
29 AT1G22670 Protease-associated (PA) RING/U-box zinc finger family
protein		 0.69 0.32 -0.32
30 AT2G20850 STRUBBELIG-receptor family 1 STRUBBELIG-receptor family 1 0.69 0.33 -0.33
31 AT1G59710 Protein of unknown function (DUF569) -0.69 0.31 -0.32
32 AT2G30925 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.69 0.32 -0.35
33 AT1G66410 calmodulin 4 CALMODULIN 4, calmodulin 4 -0.69 0.32 -0.31
34 AT4G18530 Protein of unknown function (DUF707) -0.69 0.31 -0.3
35 AT1G48270 G-protein-coupled receptor 1 G-protein-coupled receptor 1 -0.68 0.32 -0.3
36 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 0.68 0.29 -0.32
37 AT5G18940 Mo25 family protein 0.68 0.33 -0.31
38 AT5G59340 WUSCHEL related homeobox 2 WUSCHEL related homeobox 2 0.68 0.31 -0.31
39 AT4G24650 isopentenyltransferase 4 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 4,
isopentenyltransferase 4		 0.68 0.33 -0.32
40 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 0.68 0.31 -0.31
41 AT1G79220 Mitochondrial transcription termination factor family
protein		 0.68 0.32 -0.31
42 AT2G29820 Galactose oxidase/kelch repeat superfamily protein 0.68 0.32 -0.32
43 AT5G15170 tyrosyl-DNA phosphodiesterase-related tyrosyl-DNA phosphodiesterase 1 0.68 0.34 -0.31
44 AT5G55950 Nucleotide/sugar transporter family protein 0.68 0.31 -0.31
45 AT1G01310 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.68 0.35 -0.32
46 AT2G19210 Leucine-rich repeat transmembrane protein kinase protein 0.68 0.31 -0.31
47 AT4G22700 LOB domain-containing protein 32 LOB domain-containing protein 32 0.68 0.28 -0.31
48 AT1G35995 transposable element gene -0.67 0.31 -0.31
49 AT3G06760 Drought-responsive family protein -0.67 0.32 -0.3
50 AT3G61800 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2043 (InterPro:IPR018610), ENTH/VHS
(InterPro:IPR008942); Has 308 Blast hits to 279 proteins in
95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi
- 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91
(source: NCBI BLink).		 0.67 0.31 -0.29
51 AT4G39110 Malectin/receptor-like protein kinase family protein 0.67 0.33 -0.3
52 AT3G57900 unknown protein; Has 22 Blast hits to 22 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.31 -0.3
53 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 0.67 0.32 -0.31
54 AT3G55140 Pectin lyase-like superfamily protein -0.67 0.31 -0.33
55 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein -0.67 0.31 -0.34
56 AT4G31760 Peroxidase superfamily protein 0.67 0.32 -0.3
57 AT3G17410 Protein kinase superfamily protein -0.67 0.32 -0.32
58 AT4G10850 Nodulin MtN3 family protein AtSWEET7, SWEET7 0.67 0.32 -0.32
59 AT1G50180 NB-ARC domain-containing disease resistance protein 0.66 0.31 -0.29
60 AT1G21710 8-oxoguanine-DNA glycosylase 1 ARABIDOPSIS 8-OXOGUANINE-DNA
GLYCOSYLASE 1, 8-oxoguanine-DNA
glycosylase 1		 0.66 0.31 -0.32
61 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 -0.66 0.31 -0.33
62 AT1G30950 F-box family protein UNUSUAL FLORAL ORGANS 0.66 0.31 -0.31
63 AT5G51690 1-amino-cyclopropane-1-carboxylate synthase 12 1-amino-cyclopropane-1-carboxylate
synthase 12		 0.66 0.31 -0.31
64 AT1G76290 AMP-dependent synthetase and ligase family protein 0.66 0.31 -0.32
65 AT4G27370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 MYOSIN VIII B, VIIIB 0.66 0.35 -0.31
66 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.66 0.31 -0.31
67 AT5G50480 nuclear factor Y, subunit C6 nuclear factor Y, subunit C6 0.65 0.32 -0.32
68 AT1G67220 histone acetyltransferase of the CBP family 2 ARABIDOPSIS THALIANA P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
1, HAC02, histone
acetyltransferase of the CBP
family 2		 0.65 0.29 -0.31
69 AT5G12180 calcium-dependent protein kinase 17 calcium-dependent protein kinase
17		 0.65 0.35 -0.32
70 AT5G61210 soluble N-ethylmaleimide-sensitive factor adaptor protein
33		 ATSNAP33, ATSNAP33B, soluble
N-ethylmaleimide-sensitive factor
adaptor protein 33, SNP33		 -0.65 0.31 -0.3
71 AT5G09430 alpha/beta-Hydrolases superfamily protein -0.65 0.32 -0.33
72 AT2G30780 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.34 -0.31
73 AT2G24370 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.65 0.32 -0.33
74 AT4G10490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.65 0.33 -0.31
75 AT3G49830 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.33 -0.32
76 AT4G19620 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.3 -0.34
77 AT5G49440 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.65 0.29 -0.32
78 AT3G43130 transposable element gene 0.65 0.32 -0.32
79 AT1G06740 transposable element gene 0.65 0.33 -0.32
80 AT3G44910 cation/H+ exchanger 12 ATCHX12, cation/H+ exchanger 12 0.65 0.32 -0.3
81 AT5G20420 chromatin remodeling 42 chromatin remodeling 42 0.65 0.31 -0.33
82 AT2G13680 callose synthase 5 ARABIDOPSIS THALIANA GLUCAN
SYNTHASE-LIKE 2, callose synthase
5, GLUCAN SYNTHASE-LIKE 2		 0.64 0.31 -0.33
83 AT3G48900 single-stranded DNA endonuclease family protein 0.64 0.31 -0.32
84 AT1G26830 cullin 3 cullin 3, cullin 3A, cullin 3,
cullin 3A		 -0.64 0.33 -0.32
85 AT4G39100 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 short life -0.64 0.3 -0.31
86 AT2G06120 transposable element gene 0.64 0.3 -0.32
87 AT5G23770 DOMAIN OF UNKNOWN FUNCTION 724 8 DOMAIN OF UNKNOWN FUNCTION 724 8,
DOMAIN OF UNKNOWN FUNCTION 724 8		 0.64 0.31 -0.32
88 AT2G11590 transposable element gene 0.64 0.32 -0.32
89 AT5G25760 peroxin4 peroxin4, ubiquitin-conjugating
enzyme 21		 -0.64 0.3 -0.31
90 AT4G17170 RAB GTPase homolog B1C AT-RAB2, ARABIDOPSIS RAB GTPASE
HOMOLOG B1B, ATRAB2A, ATRABB1C,
RAB GTPASE HOMOLOG B1B, RAB2A, RAB
GTPase homolog B1C		 -0.64 0.31 -0.34
91 AT1G19060 Protein of unknown function (DUF626) 0.64 0.31 -0.31
92 AT2G27375 transposable element gene 0.64 0.31 -0.33
93 AT1G52840 transposable element gene -0.63 0.31 -0.33
94 AT4G35510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits
to 179 proteins in 73 species: Archae - 0; Bacteria - 87;
Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 -0.63 0.3 -0.31
95 AT3G60250 casein kinase II beta chain 3 casein kinase II beta chain 3 -0.63 0.34 -0.32
96 AT3G42700 transposable element gene 0.63 0.32 -0.28
97 AT3G42100 transposable element gene 0.63 0.31 -0.3
98 AT1G54140 TATA binding protein associated factor 21kDa subunit TBP-ASSOCIATED FACTOR 9, TATA
binding protein associated factor
21kDa subunit		 -0.63 0.36 -0.3
99 AT5G21010 BTB-POZ and MATH domain 5 BTB-POZ AND MATH DOMAIN 5, BTB-POZ
and MATH domain 5		 -0.63 0.32 -0.31
100 AT5G45080 phloem protein 2-A6 phloem protein 2-A6, phloem
protein 2-A6		 0.63 0.33 -0.32
101 AT1G20150 Subtilisin-like serine endopeptidase family protein 0.63 0.31 -0.3
102 AT2G21480 Malectin/receptor-like protein kinase family protein 0.63 0.32 -0.3
103 AT2G45620 Nucleotidyltransferase family protein 0.63 0.33 -0.31
104 AT4G00340 receptor-like protein kinase 4 receptor-like protein kinase 4 0.63 0.31 -0.35
105 AT5G27240 DNAJ heat shock N-terminal domain-containing protein 0.63 0.3 -0.3
106 AT3G16600 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 -0.63 0.31 -0.32
107 AT1G08080 alpha carbonic anhydrase 7 alpha carbonic anhydrase 7, A.
THALIANA ALPHA CARBONIC ANHYDRASE
7		 0.63 0.31 -0.32
108 AT1G59790 Cullin family protein 0.63 0.31 -0.31
109 AT2G20050 protein serine/threonine phosphatases;protein
kinases;catalytics;cAMP-dependent protein kinase
regulators;ATP binding;protein serine/threonine
phosphatases		 0.63 0.31 -0.32
110 AT2G13510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G13500.1); Has 136 Blast hits
to 116 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.31 -0.3
111 AT5G52975 Protein of unknown function (DUF1278) 0.63 0.32 -0.3
112 AT5G48670 AGAMOUS-like 80 AGAMOUS-like 80, FEM111 -0.63 0.29 -0.32
113 AT3G16060 ATP binding microtubule motor family protein 0.63 0.35 -0.31
114 AT5G15490 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 3 -0.63 0.3 -0.31
115 AT2G07728 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
Has 1 Blast hits to 1 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.34 -0.3
116 AT4G17670 Protein of unknown function (DUF581) -0.62 0.32 -0.33
117 AT5G37780 calmodulin 1 ACAM-1, calmodulin 1, TOUCH 1 -0.62 0.32 -0.3
118 AT1G74220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, flower, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast
hits to 347 proteins in 86 species: Archae - 0; Bacteria -
17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2;
Other Eukaryotes - 136 (source: NCBI BLink).		 -0.62 0.3 -0.32
119 AT3G32100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.31 -0.32
120 AT1G02130 RAS 5 RAS 5, ARABIDOPSIS RAS 5,
ARABIDOPSIS THALIANA RESPONSIVE TO
ABSCISIC ACID 1B, ARABIDOPSIS
THALIANA RAB D2A, RAS 5, RAB D2A		 -0.62 0.31 -0.3
121 AT5G53920 ribosomal protein L11 methyltransferase-related -0.61 0.3 -0.32
122 AT4G22070 WRKY DNA-binding protein 31 ATWRKY31, WRKY DNA-binding protein
31		 -0.61 0.31 -0.31
123 AT2G41410 Calcium-binding EF-hand family protein -0.61 0.31 -0.32
124 AT5G05270 Chalcone-flavanone isomerase family protein -0.61 0.31 -0.32
125 AT3G51260 20S proteasome alpha subunit PAD1 20S proteasome alpha subunit PAD1 -0.61 0.3 -0.31
126 AT5G19480 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G12230.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.33 -0.32
127 AT5G43000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.61 0.29 -0.3
128 AT3G15040 Protein of unknown function, DUF584 -0.61 0.33 -0.32
129 AT1G47750 peroxin 11A peroxin 11A -0.61 0.3 -0.33
130 AT5G35550 Duplicated homeodomain-like superfamily protein MYB DOMAIN PROTEIN 123, ATTT2, MYB
DOMAIN PROTEIN 123, TRANSPARENT
TESTA 2		 -0.61 0.32 -0.33
131 AT5G65540 unknown protein; Has 6825 Blast hits to 3811 proteins in
289 species: Archae - 0; Bacteria - 184; Metazoa - 2139;
Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes -
2874 (source: NCBI BLink).		 -0.6 0.32 -0.33
132 AT2G39240 RNA polymerase I specific transcription initiation factor
RRN3 protein		 -0.6 0.34 -0.32
133 AT3G05500 Rubber elongation factor protein (REF) -0.6 0.3 -0.33
134 AT5G58180 Synaptobrevin family protein ATYKT62, YKT62 -0.6 0.3 -0.3
135 AT5G14300 prohibitin 5 prohibitin 5, prohibitin 5 -0.6 0.32 -0.3
136 AT1G65020 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endoplasmic
reticulum, plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast
hits to 69 proteins in 27 species: Archae - 0; Bacteria -
18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.6 0.3 -0.32
137 AT2G13760 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24380.1); Has 68 Blast hits
to 68 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 4; Plants - 43; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 -0.6 0.3 -0.3
138 AT3G45500 BEST Arabidopsis thaliana protein match is: RING/U-box
protein with C6HC-type zinc finger (TAIR:AT3G45580.1); Has
48 Blast hits to 46 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.34 -0.34
139 AT2G37720 TRICHOME BIREFRINGENCE-LIKE 15 TRICHOME BIREFRINGENCE-LIKE 15 -0.6 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
140 C0090 Fructose D-(-)-Fructose D-Fructose sorbitol degradation I,
fructan degradation 		-0.61 0.3 -0.32 C0090