AT2G37920 : embryo defective 1513
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AGICode AT2G37920
Description copper ion transmembrane transporters
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G37920 copper ion transmembrane transporters embryo defective 1513 1 0.33 -0.33
2 AT5G22830 magnesium (Mg) transporter 10 magnesium (Mg) transporter 10,
GMN10, magnesium (Mg) transporter
10, MAGNESIUM TRANSPORTER 10,
MRS2-11
0.83 0.33 -0.31
3 AT1G27385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF493 (InterPro:IPR007454);
Has 76 Blast hits to 76 proteins in 23 species: Archae - 0;
Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).
0.79 0.33 -0.32
4 AT2G36290 alpha/beta-Hydrolases superfamily protein -0.76 0.3 -0.31
5 AT1G32070 nuclear shuttle interacting nuclear shuttle interacting,
nuclear shuttle interacting
0.75 0.31 -0.3
6 AT1G06060 LisH and RanBPM domains containing protein 0.75 0.32 -0.32
7 AT2G44760 Domain of unknown function (DUF3598) 0.75 0.32 -0.32
8 AT1G71695 Peroxidase superfamily protein 0.75 0.32 -0.31
9 AT5G03420 5'-AMP-activated protein kinase-related 0.74 0.33 -0.32
10 AT1G78620 Protein of unknown function DUF92, transmembrane 0.74 0.31 -0.31
11 AT1G67280 Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily protein
0.74 0.32 -0.31
12 AT2G32280 Protein of unknown function (DUF1218) -0.74 0.32 -0.32
13 AT1G79870 D-isomer specific 2-hydroxyacid dehydrogenase family
protein
0.73 0.31 -0.3
14 AT2G40600 appr-1-p processing enzyme family protein 0.73 0.32 -0.32
15 AT2G38270 CAX-interacting protein 2 GLUTAREDOXIN, CAX-interacting
protein 2
0.73 0.32 -0.3
16 AT5G45390 CLP protease P4 CLP protease P4, NUCLEAR-ENCODED
CLP PROTEASE P4
0.73 0.31 -0.3
17 AT2G42430 lateral organ boundaries-domain 16 ASYMMETRIC LEAVES2-LIKE 18,
lateral organ boundaries-domain 16
-0.73 0.32 -0.31
18 AT2G20875 epidermal patterning factor 1 EPIDERMAL PATTERNING FACTOR 1 0.72 0.3 -0.31
19 AT2G26540 uroporphyrinogen-III synthase family protein DOMAIN OF UNKNOWN FUNCTION 724 3,
ARABIDOPSIS THALIANA
UROPORPHYRINOGEN III SYNTHASE,
DOMAIN OF UNKNOWN FUNCTION 724 3,
HEMD, UROPORPHYRINOGEN III
SYNTHASE
0.72 0.33 -0.32
20 AT2G28430 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.72 0.31 -0.32
21 AT5G39820 NAC domain containing protein 94 NAC domain containing protein 94,
NAC domain containing protein 94
-0.72 0.32 -0.3
22 AT1G23010 Cupredoxin superfamily protein Low Phosphate Root1 -0.72 0.31 -0.3
23 AT2G01870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
Has 11 Blast hits to 11 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
0.72 0.33 -0.3
24 AT1G54540 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family
-0.72 0.3 -0.33
25 AT3G09250 Nuclear transport factor 2 (NTF2) family protein 0.72 0.31 -0.3
26 AT5G67290 FAD-dependent oxidoreductase family protein 0.71 0.31 -0.3
27 AT5G54540 Uncharacterised conserved protein (UCP012943) 0.71 0.3 -0.32
28 AT3G46500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
-0.71 0.28 -0.31
29 AT4G01900 GLNB1 homolog GLNB1 homolog, PII 0.71 0.32 -0.33
30 AT4G21860 methionine sulfoxide reductase B 2 methionine sulfoxide reductase B 2 0.71 0.33 -0.32
31 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
0.71 0.31 -0.33
32 AT3G10970 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein
0.71 0.31 -0.33
33 AT2G35920 RNA helicase family protein -0.7 0.32 -0.31
34 AT3G24240 Leucine-rich repeat receptor-like protein kinase family
protein
-0.7 0.3 -0.32
35 AT2G14260 proline iminopeptidase proline iminopeptidase 0.7 0.3 -0.33
36 AT1G09380 nodulin MtN21 /EamA-like transporter family protein -0.7 0.3 -0.33
37 AT3G26550 Cysteine/Histidine-rich C1 domain family protein -0.7 0.32 -0.29
38 AT1G60870 maternal effect embryo arrest 9 maternal effect embryo arrest 9 0.7 0.32 -0.33
39 AT4G24730 Calcineurin-like metallo-phosphoesterase superfamily
protein
0.7 0.29 -0.31
40 AT1G61780 postsynaptic protein-related 0.7 0.32 -0.31
41 AT1G22440 Zinc-binding alcohol dehydrogenase family protein -0.7 0.3 -0.33
42 AT2G27290 Protein of unknown function (DUF1279) 0.7 0.31 -0.31
43 AT1G49970 CLP protease proteolytic subunit 1 CLP protease proteolytic subunit
1, NUCLEAR CLPP 5, SUPPRESSOR OF
VARIEGATION 2
0.7 0.32 -0.31
44 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
0.69 0.3 -0.32
45 AT4G11980 nudix hydrolase homolog 14 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 14, nudix
hydrolase homolog 14, nudix
hydrolase homolog 14
0.69 0.31 -0.32
46 AT5G48940 Leucine-rich repeat transmembrane protein kinase family
protein
-0.69 0.3 -0.3
47 AT2G15570 Thioredoxin superfamily protein ATHM3, Arabidopsis thioredoxin
M-type 3, GFP ARRESTED TRAFFICKING
1, THIOREDOXIN-M3
0.69 0.31 -0.33
48 AT2G22090 RNA-binding (RRM/RBD/RNP motifs) family protein UBA1A 0.69 0.31 -0.32
49 AT2G42130 Plastid-lipid associated protein PAP / fibrillin family
protein
0.69 0.33 -0.32
50 AT4G12060 Double Clp-N motif protein 0.68 0.34 -0.32
51 AT2G42750 DNAJ heat shock N-terminal domain-containing protein 0.68 0.32 -0.3
52 AT5G52170 homeodomain GLABROUS 7 homeodomain GLABROUS 7 -0.68 0.32 -0.31
53 AT2G45430 AT-hook motif nuclear-localized protein 22 AT-hook motif nuclear-localized
protein 22
-0.68 0.31 -0.34
54 AT4G01940 NFU domain protein 1 AtCNFU1, NFU domain protein 1 0.68 0.32 -0.32
55 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 0.68 0.32 -0.34
56 AT1G73590 Auxin efflux carrier family protein ARABIDOPSIS THALIANA PIN-FORMED 1,
PIN-FORMED 1
-0.68 0.3 -0.31
57 AT3G22600 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
-0.68 0.32 -0.32
58 AT3G09150 phytochromobilin:ferredoxin oxidoreductase, chloroplast /
phytochromobilin synthase (HY2)
ARABIDOPSIS ELONGATED HYPOCOTYL 2,
GENOMES UNCOUPLED 3, ELONGATED
HYPOCOTYL 2
0.67 0.33 -0.3
59 AT2G43750 O-acetylserine (thiol) lyase B ARABIDOPSIS CYSTEINE SYNTHASE 1,
ARABIDOPSIS THALIANA CYSTEIN
SYNTHASE-B, CHLOROPLAST
O-ACETYLSERINE SULFHYDRYLASE 1,
O-acetylserine (thiol) lyase B
0.67 0.29 -0.32
60 AT1G26660 Prefoldin chaperone subunit family protein -0.67 0.33 -0.32
61 AT4G36810 geranylgeranyl pyrophosphate synthase 1 geranylgeranyl pyrophosphate
synthase 1
0.67 0.32 -0.32
62 AT5G23430 Transducin/WD40 repeat-like superfamily protein -0.67 0.31 -0.33
63 AT4G36910 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 1,
CYSTATHIONE [BETA]-SYNTHASE
DOMAIN-CONTAINING PROTEIN 2, LOSS
OF THE TIMING OF ET AND JA
BIOSYNTHESIS 2
0.67 0.3 -0.34
64 AT3G02570 Mannose-6-phosphate isomerase, type I MATERNAL EFFECT EMBRYO ARREST 31,
PHOSPHOMANNOSE ISOMERASE 1
0.67 0.33 -0.3
65 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
-0.66 0.3 -0.33
66 AT1G07640 Dof-type zinc finger DNA-binding family protein OBP2 0.66 0.33 -0.28
67 AT4G08150 KNOTTED-like from Arabidopsis thaliana BREVIPEDICELLUS, BREVIPEDICELLUS
1, KNOTTED-like from Arabidopsis
thaliana
-0.66 0.31 -0.28
68 AT1G65410 non-intrinsic ABC protein 11 ATP-binding cassette I13,
non-intrinsic ABC protein 11,
non-intrinsic ABC protein 11,
TRIGALACTOSYLDIACYLGLYCEROL 3
0.66 0.31 -0.33
69 AT3G04570 AT-hook motif nuclear-localized protein 19 AT-hook motif nuclear-localized
protein 19
-0.66 0.32 -0.32
70 AT3G54860 Sec1/munc18-like (SM) proteins superfamily ATVPS33, VACUOLAR PROTEIN SORTING
33
0.66 0.31 -0.3
71 AT3G52230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast outer membrane, chloroplast thylakoid membrane,
chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 29
Blast hits to 29 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
0.66 0.31 -0.33
72 AT1G79470 Aldolase-type TIM barrel family protein -0.66 0.32 -0.32
73 AT5G10510 AINTEGUMENTA-like 6 AINTEGUMENTA-like 6, PLETHORA 3 -0.66 0.33 -0.34
74 AT5G42180 Peroxidase superfamily protein peroxidase 64 -0.66 0.3 -0.31
75 AT4G31750 HOPW1-1-interacting 2 HOPW1-1-interacting 2 -0.66 0.3 -0.32
76 AT2G30210 laccase 3 laccase 3 -0.66 0.3 -0.31
77 AT3G50270 HXXXD-type acyl-transferase family protein 0.66 0.32 -0.35
78 AT3G62270 HCO3- transporter family -0.66 0.31 -0.32
79 AT2G31670 Stress responsive alpha-beta barrel domain protein 0.66 0.31 -0.35
80 AT5G27840 Calcineurin-like metallo-phosphoesterase superfamily
protein
TOPP8 0.66 0.32 -0.32
81 AT2G47260 WRKY DNA-binding protein 23 WRKY DNA-BINDING PROTEIN 23, WRKY
DNA-binding protein 23
-0.66 0.3 -0.31
82 AT5G13720 Uncharacterised protein family (UPF0114) 0.66 0.32 -0.34
83 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1
-0.65 0.33 -0.32
84 AT3G59010 pectin methylesterase 61 pectin methylesterase 61 0.65 0.3 -0.3
85 AT4G13950 ralf-like 31 ralf-like 31 0.65 0.3 -0.34
86 AT2G43950 chloroplast outer envelope protein 37 ARABIDOPSIS CHLOROPLAST OUTER
ENVELOPE PROTEIN 37, chloroplast
outer envelope protein 37
0.65 0.31 -0.32
87 AT4G36260 Lateral root primordium (LRP) protein-related SHI RELATED SEQUENCE 2, STYLISH 2 -0.65 0.33 -0.31
88 AT2G15695 Protein of unknown function DUF829, transmembrane 53 0.65 0.33 -0.31
89 AT1G51640 exocyst subunit exo70 family protein G2 exocyst subunit exo70 family
protein G2, exocyst subunit exo70
family protein G2
-0.65 0.34 -0.31
90 AT3G07050 GTP-binding family protein nucleostemin-like 1 -0.65 0.33 -0.32
91 AT3G28920 homeobox protein 34 homeobox protein 34, homeobox
protein 34, ZINC FINGER
HOMEODOMAIN 9
0.65 0.31 -0.31
92 AT5G06130 chaperone protein dnaJ-related 0.65 0.34 -0.3
93 AT2G46225 ABI-1-like 1 ABI-1-like 1 0.65 0.32 -0.31
94 AT1G68260 Thioesterase superfamily protein 0.65 0.33 -0.33
95 AT5G10700 Peptidyl-tRNA hydrolase II (PTH2) family protein 0.65 0.29 -0.3
96 AT2G41530 S-formylglutathione hydrolase ARABIDOPSIS THALIANA
S-FORMYLGLUTATHIONE HYDROLASE,
S-formylglutathione hydrolase
0.65 0.32 -0.36
97 AT1G21740 Protein of unknown function (DUF630 and DUF632) -0.65 0.35 -0.3
98 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1
-0.65 0.32 -0.32
99 AT3G21350 RNA polymerase transcriptional regulation mediator-related MED6 0.64 0.34 -0.34
100 AT3G18400 NAC domain containing protein 58 NAC domain containing protein 58,
NAC domain containing protein 58
-0.64 0.33 -0.33
101 AT1G13970 Protein of unknown function (DUF1336) -0.64 0.3 -0.35
102 AT1G75640 Leucine-rich receptor-like protein kinase family protein -0.64 0.32 -0.3
103 AT5G14750 myb domain protein 66 myb domain protein 66, myb domain
protein 66, WEREWOLF, WEREWOLF 1
-0.64 0.3 -0.34
104 AT2G32610 cellulose synthase-like B1 cellulose synthase-like B1,
CELLULOSE SYNTHASE LIKE B1,
CELLULOSE SYNTHASE LIKE B1,
cellulose synthase-like B1
-0.64 0.31 -0.32
105 AT5G41040 HXXXD-type acyl-transferase family protein -0.64 0.32 -0.29
106 AT5G06800 myb-like HTH transcriptional regulator family protein -0.64 0.31 -0.3
107 AT1G30910 Molybdenum cofactor sulfurase family protein 0.64 0.29 -0.31
108 AT5G16660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, membrane,
chloroplast envelope; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).
0.64 0.3 -0.31
109 AT2G46735 unknown protein; Has 14 Blast hits to 14 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.64 0.31 -0.31
110 AT2G04025 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).
root meristem growth factor 3 -0.64 0.33 -0.33
111 AT1G79160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits
to 102 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.64 0.3 -0.32
112 AT1G08110 lactoylglutathione lyase family protein / glyoxalase I
family protein
0.64 0.31 -0.34
113 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 0.64 0.32 -0.32
114 AT1G79320 metacaspase 6 metacaspase 6, metacaspase 2c,
metacaspase 6, metacaspase 2c
-0.63 0.3 -0.3
115 AT2G06040 CONTAINS InterPro DOMAIN/s: Leucine-rich repeat,
cysteine-containing subtype (InterPro:IPR006553); BEST
Arabidopsis thaliana protein match is: RNI-like superfamily
protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547
proteins in 240 species: Archae - 0; Bacteria - 125;
Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0;
Other Eukaryotes - 439 (source: NCBI BLink).
-0.63 0.3 -0.32
116 AT4G09940 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
-0.63 0.31 -0.32
117 AT1G47670 Transmembrane amino acid transporter family protein -0.63 0.33 -0.31
118 AT4G37890 Zinc finger (C3HC4-type RING finger) family protein embryo sac development arrest 40 -0.63 0.32 -0.32
119 AT5G40230 nodulin MtN21 /EamA-like transporter family protein -0.62 0.31 -0.31
120 AT5G51670 Protein of unknown function (DUF668) -0.62 0.32 -0.31
121 AT3G01070 early nodulin-like protein 16 AtENODL16, early nodulin-like
protein 16
-0.62 0.32 -0.32
122 AT2G42570 TRICHOME BIREFRINGENCE-LIKE 39 TRICHOME BIREFRINGENCE-LIKE 39 -0.62 0.33 -0.32
123 AT4G28890 RING/U-box superfamily protein -0.62 0.31 -0.31
124 AT5G10100 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein
trehalose-6-phosphate phosphatase
I
-0.61 0.32 -0.31
125 AT5G66390 Peroxidase superfamily protein -0.61 0.32 -0.3
126 AT2G35770 serine carboxypeptidase-like 28 serine carboxypeptidase-like 28 -0.61 0.35 -0.3
127 AT2G38370 Plant protein of unknown function (DUF827) -0.61 0.3 -0.31
128 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 -0.61 0.31 -0.32
129 AT5G02070 Protein kinase family protein -0.61 0.32 -0.33
130 AT5G19410 ABC-2 type transporter family protein ATP-binding cassette G23 -0.61 0.32 -0.3
131 AT1G79630 Protein phosphatase 2C family protein -0.61 0.33 -0.31
132 AT5G45210 Disease resistance protein (TIR-NBS-LRR class) family -0.61 0.32 -0.34
133 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1
-0.61 0.3 -0.31
134 AT2G48140 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
embryo sac development arrest 4 -0.61 0.28 -0.31
135 AT1G54510 NIMA-related serine/threonine kinase 1 NIMA-related serine/threonine
kinase 1, NIMA-related
serine/threonine kinase 1
-0.6 0.31 -0.3
136 AT2G02850 plantacyanin plantacyanin -0.6 0.31 -0.3
137 AT4G37650 GRAS family transcription factor SHOOT GRAVITROPISM 7, SHORT ROOT -0.6 0.31 -0.31
138 AT5G49350 Glycine-rich protein family -0.6 0.3 -0.32
139 AT5G51590 AT hook motif DNA-binding family protein -0.6 0.32 -0.3
140 AT4G34320 Protein of unknown function (DUF677) -0.6 0.33 -0.33
141 AT1G14780 MAC/Perforin domain-containing protein -0.6 0.31 -0.32
142 AT2G37360 ABC-2 type transporter family protein ATP-binding cassette G2 -0.6 0.33 -0.31
143 AT2G48130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
-0.59 0.29 -0.3
144 AT2G34710 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein
ATHB-14, ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 14, PHABULOSA,
PHABULOSA 1D
-0.59 0.33 -0.32
145 AT1G53860 Remorin family protein -0.59 0.34 -0.3
146 AT1G33790 jacalin lectin family protein -0.59 0.31 -0.33
147 AT3G54000 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.59 0.33 -0.3
148 AT5G07190 seed gene 3 seed gene 3 -0.59 0.3 -0.32
149 AT5G13680 IKI3 family protein ABA-OVERLY SENSITIVE 1, AtELP1,
ELONGATA 2
-0.59 0.32 -0.3