AT2G40720 : -
Query Information
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AGICode AT2G40720
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein 1 0.32 -0.32
2 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 0.81 0.3 -0.31
3 AT2G34400 Pentatricopeptide repeat (PPR-like) superfamily protein 0.81 0.3 -0.34
4 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.8 0.29 -0.31
5 AT1G64790 ILITYHIA ILITYHIA 0.79 0.32 -0.32
6 AT5G40280 Prenyltransferase family protein ARABIDOPSIS THALIANA FARNESYL
TRANSFERASE BETA SUBUNIT, ENHANCED
RESPONSE TO ABA 1, WIGGUM		 -0.77 0.33 -0.29
7 AT3G43630 Vacuolar iron transporter (VIT) family protein 0.77 0.3 -0.29
8 AT3G66656 AGAMOUS-like 91 AGAMOUS-like 91 -0.76 0.32 -0.31
9 AT4G20410 gamma-soluble NSF attachment protein GAMMA-SOLUBLE NSF ATTACHMENT
PROTEIN, gamma-soluble NSF
attachment protein		 -0.75 0.33 -0.33
10 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 0.75 0.34 -0.31
11 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12		 0.75 0.32 -0.33
12 AT4G10260 pfkB-like carbohydrate kinase family protein 0.75 0.33 -0.32
13 AT2G26210 Ankyrin repeat family protein -0.74 0.3 -0.32
14 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein 0.74 0.32 -0.31
15 AT5G10120 Ethylene insensitive 3 family protein 0.74 0.31 -0.33
16 AT3G42070 transposable element gene 0.74 0.32 -0.31
17 AT4G15730 CW-type Zinc Finger 0.74 0.31 -0.33
18 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.74 0.3 -0.31
19 AT5G06839 bZIP transcription factor family protein bZIP65, TGACG (TGA) motif-binding
protein 10		 0.74 0.33 -0.29
20 AT3G31920 transposable element gene 0.74 0.3 -0.33
21 AT2G21710 Mitochondrial transcription termination factor family
protein		 embryo defective 2219 0.73 0.32 -0.32
22 AT1G47350 F-box associated ubiquitination effector family protein -0.73 0.32 -0.34
23 AT5G26700 RmlC-like cupins superfamily protein 0.73 0.31 -0.33
24 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 0.72 0.34 -0.33
25 AT5G25540 CTC-interacting domain 6 CTC-interacting domain 6 -0.72 0.33 -0.32
26 AT2G36980 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.32 -0.32
27 AT1G62940 acyl-CoA synthetase 5 acyl-CoA synthetase 5 0.72 0.31 -0.31
28 AT5G57720 AP2/B3-like transcriptional factor family protein 0.72 0.34 -0.33
29 AT5G38260 Protein kinase superfamily protein 0.72 0.3 -0.32
30 AT2G05200 transposable element gene 0.72 0.31 -0.33
31 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 0.72 0.31 -0.33
32 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 0.72 0.32 -0.32
33 AT1G26760 SET domain protein 35 ATXR1, SET domain protein 35 0.72 0.3 -0.28
34 AT1G75430 BEL1-like homeodomain 11 BEL1-like homeodomain 11 0.72 0.31 -0.3
35 AT3G01380 transferases;sulfuric ester
hydrolases;catalytics;transferases		 0.72 0.33 -0.3
36 AT3G43120 SAUR-like auxin-responsive protein family 0.72 0.3 -0.29
37 AT1G79030 Chaperone DnaJ-domain superfamily protein 0.71 0.32 -0.32
38 AT1G11060 WAPL (Wings apart-like protein regulation of
heterochromatin) protein		 0.71 0.32 -0.34
39 AT3G49710 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.32 -0.34
40 AT5G37620 Cysteine/Histidine-rich C1 domain family protein 0.71 0.32 -0.32
41 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 0.71 0.32 -0.3
42 AT2G11090 transposable element gene 0.71 0.31 -0.3
43 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 -0.71 0.31 -0.32
44 AT1G43260 hAT transposon superfamily protein 0.71 0.32 -0.31
45 AT1G12620 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.3 -0.32
46 AT1G43790 tracheary element differentiation-related 6 tracheary element
differentiation-related 6		 -0.7 0.33 -0.33
47 AT1G09020 homolog of yeast sucrose nonfermenting 4 ATSNF4, homolog of yeast sucrose
nonfermenting 4		 0.7 0.3 -0.33
48 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).		 0.7 0.31 -0.33
49 AT4G34850 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 5 0.7 0.32 -0.31
50 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.69 0.31 -0.33
51 AT5G38500 Domain of unknown function (DUF313) 0.69 0.32 -0.32
52 AT2G37160 Transducin/WD40 repeat-like superfamily protein 0.69 0.32 -0.33
53 AT1G26860 transposable element gene -0.69 0.31 -0.31
54 AT5G59680 Leucine-rich repeat protein kinase family protein 0.69 0.3 -0.32
55 AT5G50390 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3141 0.69 0.31 -0.33
56 AT1G74820 RmlC-like cupins superfamily protein 0.69 0.32 -0.36
57 AT1G79780 Uncharacterised protein family (UPF0497) 0.69 0.34 -0.33
58 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein 0.69 0.3 -0.31
59 AT2G23360 Plant protein of unknown function (DUF869) 0.68 0.31 -0.32
60 AT2G23660 LOB domain-containing protein 10 LOB domain-containing protein 10 0.68 0.33 -0.3
61 AT2G38650 galacturonosyltransferase 7 galacturonosyltransferase 7, LIKE
GLYCOSYL TRANSFERASE 7		 0.68 0.33 -0.3
62 AT1G05750 Tetratricopeptide repeat (TPR)-like superfamily protein CLB19, pigment defective 247 0.68 0.31 -0.31
63 AT3G55830 Nucleotide-diphospho-sugar transferases superfamily protein ECTOPICALLY PARTING CELLS -0.68 0.32 -0.33
64 AT5G36950 DegP protease 10 DegP protease 10 0.68 0.32 -0.32
65 AT5G24130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, flower;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.33 -0.31
66 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family 0.68 0.32 -0.33
67 AT3G44740 Class II aaRS and biotin synthetases superfamily protein 0.68 0.32 -0.29
68 AT3G04810 NIMA-related kinase 2 NIMA-related kinase 2,
NIMA-related kinase 2		 0.68 0.34 -0.3
69 AT3G55770 GATA type zinc finger transcription factor family protein WLIM2b -0.68 0.33 -0.32
70 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.32 -0.3
71 AT4G31170 Protein kinase superfamily protein -0.68 0.32 -0.32
72 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.68 0.29 -0.3
73 AT5G27170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1807 Blast hits to 1807 proteins in 277
species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi -
347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.32 -0.31
74 AT5G01310 APRATAXIN-like APRATAXIN-like 0.68 0.33 -0.31
75 AT1G31630 AGAMOUS-like 86 AGAMOUS-like 86 -0.68 0.32 -0.32
76 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 0.67 0.32 -0.32
77 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.67 0.31 -0.33
78 AT3G48900 single-stranded DNA endonuclease family protein 0.67 0.32 -0.3
79 AT4G16280 RNA binding;abscisic acid binding FCA 0.67 0.31 -0.32
80 AT5G64050 glutamate tRNA synthetase ATERS, glutamate tRNA synthetase,
OVULE ABORTION 3		 0.67 0.33 -0.28
81 AT5G20360 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox3 0.67 0.31 -0.32
82 AT5G05320 FAD/NAD(P)-binding oxidoreductase family protein 0.67 0.31 -0.32
83 AT4G09100 RING/U-box superfamily protein 0.67 0.3 -0.34
84 AT1G55700 Cysteine/Histidine-rich C1 domain family protein 0.67 0.3 -0.33
85 AT2G44260 Plant protein of unknown function (DUF946) -0.67 0.34 -0.32
86 AT2G48160 Tudor/PWWP/MBT domain-containing protein 0.67 0.33 -0.29
87 AT5G41320 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.67 0.34 -0.32
88 AT2G13550 unknown protein; Has 23 Blast hits to 20 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 0.67 0.31 -0.31
89 AT4G16430 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.67 0.29 -0.33
90 AT2G16970 Major facilitator superfamily protein maternal effect embryo arrest 15 0.66 0.32 -0.3
91 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24		 -0.66 0.3 -0.33
92 AT3G06050 peroxiredoxin IIF PEROXIREDOXIN IIF, peroxiredoxin
IIF		 -0.66 0.32 -0.32
93 AT5G44970 Protein with RNI-like/FBD-like domains 0.66 0.33 -0.32
94 AT2G05120 Nucleoporin, Nup133/Nup155-like 0.66 0.29 -0.32
95 AT4G00355 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits
to 97 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 ATG8-interacting protein 2 -0.66 0.32 -0.31
96 AT4G15200 formin 3 formin 3, formin 3 -0.66 0.3 -0.3
97 AT2G11150 transposable element gene 0.66 0.3 -0.33
98 AT1G79950 RAD3-like DNA-binding helicase protein 0.66 0.34 -0.32
99 AT1G34080 transposable element gene 0.66 0.31 -0.32
100 AT4G38760 Protein of unknown function (DUF3414) 0.66 0.32 -0.31
101 AT5G09370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.66 0.31 -0.33
102 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.32 -0.31
103 AT5G44070 phytochelatin synthase 1 (PCS1) ARA8, ARABIDOPSIS THALIANA
PHYTOCHELATIN SYNTHASE 1, CADMIUM
SENSITIVE 1, PHYTOCHELATIN
SYNTHASE 1		 -0.66 0.34 -0.32
104 AT2G27280 Coiled-coil domain-containing protein 55 (DUF2040) -0.65 0.32 -0.32
105 AT5G67290 FAD-dependent oxidoreductase family protein -0.65 0.3 -0.29
106 AT1G17160 pfkB-like carbohydrate kinase family protein -0.65 0.31 -0.32
107 AT3G60120 beta glucosidase 27 beta glucosidase 27 -0.65 0.34 -0.33
108 AT1G63590 Receptor-like protein kinase-related family protein -0.65 0.31 -0.3
109 AT5G26120 alpha-L-arabinofuranosidase 2 alpha-L-arabinofuranosidase 2,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 2		 -0.65 0.3 -0.32
110 AT2G41530 S-formylglutathione hydrolase ARABIDOPSIS THALIANA
S-FORMYLGLUTATHIONE HYDROLASE,
S-formylglutathione hydrolase		 -0.65 0.31 -0.32
111 AT1G15590 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT1G80400.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.64 0.3 -0.32
112 AT1G47310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 45
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.64 0.34 -0.32
113 AT1G47680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G47700.1); Has 3 Blast
hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.29 -0.32
114 AT1G26820 ribonuclease 3 ribonuclease 3 -0.64 0.34 -0.31
115 AT2G20620 Protein of unknown function (DUF626) -0.64 0.31 -0.31
116 AT1G07980 nuclear factor Y, subunit C10 nuclear factor Y, subunit C10 -0.64 0.32 -0.31
117 AT5G19630 alpha/beta-Hydrolases superfamily protein -0.64 0.31 -0.33
118 AT4G11260 phosphatase-related ATSGT1B, ENHANCED DOWNY MILDEW 1,
ENHANCER OF TIR1-1 AUXIN
RESISTANCE 3, RPR1, SGT1B		 -0.64 0.32 -0.32
119 AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A, RAB GTPase
homolog A5A		 -0.64 0.33 -0.3
120 AT5G42560 Abscisic acid-responsive (TB2/DP1, HVA22) family protein -0.64 0.31 -0.31
121 AT1G80970 XH domain-containing protein -0.64 0.32 -0.3
122 AT5G04740 ACT domain-containing protein ACT domain repeats 12 -0.63 0.31 -0.3
123 AT5G51740 Peptidase family M48 family protein -0.63 0.32 -0.34
124 AT1G06630 F-box/RNI-like superfamily protein -0.63 0.31 -0.32
125 AT3G24315 Sec20 family protein AtSec20 -0.63 0.29 -0.32
126 AT3G52760 Integral membrane Yip1 family protein -0.63 0.34 -0.31
127 AT2G36090 F-box family protein -0.63 0.29 -0.3
128 AT4G25720 glutaminyl cyclase ARABIDOPSIS THALIANA GLUTAMINYL
CYCLASE, glutaminyl cyclase,
GLUTAMINYL CYCLOTRANSFERASE		 -0.63 0.31 -0.32
129 AT5G48140 Pectin lyase-like superfamily protein -0.63 0.33 -0.31
130 AT2G10950 BSD domain-containing protein -0.62 0.32 -0.33
131 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 -0.62 0.34 -0.33
132 AT1G14080 fucosyltransferase 6 ATFUT6, fucosyltransferase 6 -0.61 0.3 -0.32
133 AT2G44180 methionine aminopeptidase 2A methionine aminopeptidase 2A -0.61 0.33 -0.31
134 AT4G27120 CONTAINS InterPro DOMAIN/s: DDRGK domain
(InterPro:IPR019153); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.61 0.32 -0.31
135 AT2G40600 appr-1-p processing enzyme family protein -0.61 0.31 -0.31
136 AT2G04340 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.29 -0.31
137 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD		 -0.61 0.33 -0.31
138 AT1G65020 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endoplasmic
reticulum, plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast
hits to 69 proteins in 27 species: Archae - 0; Bacteria -
18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.61 0.32 -0.3
139 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.61 0.31 -0.33
140 AT2G38710 AMMECR1 family -0.61 0.3 -0.3
141 AT1G41797 transposable element gene -0.61 0.3 -0.33
142 AT3G12260 LYR family of Fe/S cluster biogenesis protein -0.61 0.31 -0.33
143 AT2G30930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane, membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G06540.1); Has 194 Blast hits to 176 proteins in
78 species: Archae - 0; Bacteria - 101; Metazoa - 15; Fungi
- 25; Plants - 12; Viruses - 4; Other Eukaryotes - 37
(source: NCBI BLink).		 -0.6 0.3 -0.32
144 AT2G04000 transposable element gene -0.6 0.31 -0.3
145 AT1G22510 RING/U-box protein with domain of unknown function (DUF
1232)		 -0.6 0.31 -0.32
146 AT5G42440 Protein kinase superfamily protein -0.6 0.29 -0.3
147 AT4G07540 transposable element gene -0.6 0.35 -0.32
148 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.6 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
149 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.75 0.45 -0.45 C0136
150 C0213 PR_MST_2410.2 - - - 0.73 0.46 -0.41
151 C0173 MST_2301.7 - - - 0.69 0.44 -0.44
152 C0214 PR_MST_2412.1 - - - 0.66 0.45 -0.45