AT2G02100 : low-molecular-weight cysteine-rich 69
Query Information
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AGICode AT2G02100
Description low-molecular-weight cysteine-rich 69
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G02100 low-molecular-weight cysteine-rich 69 low-molecular-weight cysteine-rich
69, PDF2.2		 1 0.31 -0.32
2 AT4G13640 Homeodomain-like superfamily protein unfertilized embryo sac 16 0.74 0.31 -0.32
3 AT2G21130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.72 0.31 -0.34
4 AT1G72050 transcription factor IIIA transcription factor IIIA 0.7 0.32 -0.33
5 AT5G56140 RNA-binding KH domain-containing protein 0.7 0.31 -0.32
6 AT3G12980 histone acetyltransferase of the CBP family 5 HISTONE ACETYLTRANSFERASE OF THE
CBP FAMILY 5, histone
acetyltransferase of the CBP
family 5		 0.69 0.33 -0.29
7 AT1G68500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G25422.1); Has 16 Blast hits
to 16 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.3 -0.31
8 AT4G31140 O-Glycosyl hydrolases family 17 protein 0.67 0.31 -0.34
9 AT1G13930 Involved in response to salt stress. Knockout mutants are
hypersensitive to salt stress.		 0.66 0.31 -0.28
10 AT5G63640 ENTH/VHS/GAT family protein 0.66 0.31 -0.29
11 AT1G50300 TBP-associated factor 15 TBP-associated factor 15 0.66 0.31 -0.32
12 AT3G03590 SWIB/MDM2 domain superfamily protein 0.66 0.27 -0.31
13 AT4G14300 RNA-binding (RRM/RBD/RNP motifs) family protein 0.66 0.32 -0.29
14 AT4G16442 Uncharacterised protein family (UPF0497) 0.66 0.32 -0.3
15 AT3G19120 PIF / Ping-Pong family of plant transposases 0.65 0.31 -0.32
16 AT5G62880 RAC-like 10 RAC-like 10, ARABIDOPSIS THALIANA
RAC-LIKE 10, RHO-RELATED PROTEIN
FROM PLANTS 11, RAC-like 10,
RHO-related protein from plants 11		 0.65 0.29 -0.32
17 AT1G11950 Transcription factor jumonji (jmjC) domain-containing
protein		 0.65 0.3 -0.33
18 AT2G33830 Dormancy/auxin associated family protein 0.64 0.29 -0.32
19 AT3G09020 alpha 1,4-glycosyltransferase family protein -0.64 0.31 -0.34
20 AT2G45660 AGAMOUS-like 20 AGAMOUS-like 20, SUPPRESSOR OF
OVEREXPRESSION OF CO 1, SUPPRESSOR
OF OVEREXPRESSION OF CO 1		 0.64 0.31 -0.32
21 AT4G15920 Nodulin MtN3 family protein AtSWEET17, SWEET17 -0.64 0.34 -0.32
22 AT1G43910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.32 -0.32
23 AT1G08970 nuclear factor Y, subunit C9 HEME ACTIVATED PROTEIN 5C, nuclear
factor Y, subunit C9		 0.64 0.35 -0.32
24 AT2G28650 exocyst subunit exo70 family protein H8 exocyst subunit exo70 family
protein H8, exocyst subunit exo70
family protein H8		 -0.64 0.32 -0.32
25 AT2G30800 helicase in vascular tissue and tapetum ATVT-1, helicase in vascular
tissue and tapetum		 0.63 0.34 -0.32
26 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 -0.63 0.3 -0.31
27 AT5G16190 cellulose synthase like A11 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE A11, cellulose
synthase like A11		 -0.63 0.31 -0.32
28 AT5G61380 CCT motif -containing response regulator protein APRR1, TIMING OF CAB EXPRESSION 1,
PSEUDO-RESPONSE REGULATOR 1,
TIMING OF CAB EXPRESSION 1		 0.63 0.32 -0.32
29 AT3G22440 FRIGIDA-like protein 0.63 0.31 -0.33
30 AT1G21790 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 0.62 0.32 -0.34
31 AT5G01020 Protein kinase superfamily protein 0.62 0.33 -0.32
32 AT5G50320 radical SAM domain-containing protein / GCN5-related
N-acetyltransferase (GNAT) family protein		 Elongator protein 3,
enhancer-of-asymmetric leaves-two
1, ELONGATA 3, Elongator protein
3, HISTONE ACETYLTRANSFERASE 8,
HISTONE ACETYLTRANSFERASE OF THE
GNAT FAMILY 3		 0.62 0.31 -0.31
33 AT1G50360 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 MYOSIN VIII A, VIIIA -0.62 0.31 -0.34
34 AT2G40650 PRP38 family protein 0.62 0.3 -0.29
35 AT1G54410 dehydrin family protein 0.62 0.31 -0.32
36 AT2G21660 cold, circadian rhythm, and rna binding 2 GLYCINE RICH PROTEIN 7, cold,
circadian rhythm, and rna binding
2, GLYCINE-RICH RNA-BINDING
PROTEIN 7, GLYCINE-RICH
RNA-BINDING PROTEIN 7		 0.61 0.31 -0.32
37 AT2G33010 Ubiquitin-associated (UBA) protein 0.61 0.32 -0.33
38 AT3G15620 DNA photolyase family protein UV REPAIR DEFECTIVE 3 0.61 0.32 -0.33
39 AT1G77660 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.61 0.32 -0.31
40 AT1G55060 ubiquitin 12 ubiquitin 12 -0.61 0.34 -0.31
41 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 0.61 0.32 -0.33
42 AT5G02840 LHY/CCA1-like 1 LHY/CCA1-like 1 0.6 0.29 -0.33
43 AT5G44260 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.6 0.32 -0.32
44 AT2G02090 SNF2 domain-containing protein / helicase domain-containing
protein		 CHA19, CHROMATIN REMODELING 19,
ETL1		 0.6 0.32 -0.31
45 AT1G30880 unknown protein; Has 24 Blast hits to 24 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.32 -0.31
46 AT2G22450 riboflavin biosynthesis protein, putative 0.6 0.29 -0.33
47 AT4G21710 DNA-directed RNA polymerase family protein EMBRYO DEFECTIVE 1989, NRPB2, RPB2 0.6 0.33 -0.32
48 AT2G01930 basic pentacysteine1 BASIC PENTACYSTEINE1, BBR, basic
pentacysteine1		 0.59 0.33 -0.32
49 AT3G54080 Concanavalin A-like lectin family protein 0.59 0.29 -0.33
50 AT3G17590 transcription regulatory protein SNF5, putative (BSH) BUSHY GROWTH, CHE1 0.59 0.3 -0.31
51 AT5G46070 Guanylate-binding family protein 0.59 0.32 -0.33
52 AT2G42490 Copper amine oxidase family protein -0.59 0.31 -0.32
53 AT3G53030 ser/arg-rich protein kinase 4 ser/arg-rich protein kinase 4 0.59 0.3 -0.31
54 AT2G18850 SET domain-containing protein 0.58 0.34 -0.3
55 AT5G06240 embryo defective 2735 embryo defective 2735 0.58 0.32 -0.3
56 AT1G35430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G09170.1); Has 23 Blast
hits to 23 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.32 -0.33
57 AT5G26731 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.29 -0.29
58 AT5G39020 Malectin/receptor-like protein kinase family protein -0.58 0.33 -0.29
59 AT4G18260 Cytochrome b561/ferric reductase transmembrane protein
family		 0.57 0.31 -0.33
60 AT1G52740 histone H2A protein 9 histone H2A protein 9 0.57 0.3 -0.3
61 AT1G12400 Nucleotide excision repair, TFIIH, subunit TTDA -0.56 0.29 -0.32
62 AT3G60520 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits
to 107 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.29 -0.3
63 AT4G12400 stress-inducible protein, putative Hop3 -0.56 0.31 -0.31
64 AT5G11930 Thioredoxin superfamily protein -0.56 0.33 -0.31
65 AT3G18790 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like
splicing (InterPro:IPR009360); Has 1147 Blast hits to 965
proteins in 236 species: Archae - 12; Bacteria - 13;
Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other
Eukaryotes - 483 (source: NCBI BLink).		 0.56 0.32 -0.35
66 AT4G01080 TRICHOME BIREFRINGENCE-LIKE 26 TRICHOME BIREFRINGENCE-LIKE 26 -0.56 0.31 -0.33
67 AT4G17150 alpha/beta-Hydrolases superfamily protein 0.55 0.34 -0.29
68 AT1G12110 nitrate transporter 1.1 ARABIDOPSIS THALIANA NITRATE
TRANSPORTER 1, B-1, CHLORINA 1,
CHL1-1, NITRATE TRANSPORTER 1,
nitrate transporter 1.1		 -0.55 0.3 -0.3
69 AT1G79990 structural molecules 0.55 0.31 -0.31
70 AT1G07000 exocyst subunit exo70 family protein B2 exocyst subunit exo70 family
protein B2, exocyst subunit exo70
family protein B2		 -0.55 0.34 -0.34
71 AT5G17300 Homeodomain-like superfamily protein REVEILLE 1 0.55 0.33 -0.31
72 AT1G73010 phosphate starvation-induced gene 2 pyrophosphate-specific
phosphatase1, phosphate
starvation-induced gene 2,
pyrophosphate-specific
phosphatase1, phosphate
starvation-induced gene 2		 -0.55 0.32 -0.33
73 AT1G31670 Copper amine oxidase family protein -0.55 0.32 -0.31
74 AT3G57170 N-acetylglucosaminyl transferase component family protein /
Gpi1 family protein		 0.55 0.31 -0.31
75 AT1G63150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.55 0.33 -0.32
76 AT1G06590 unknown protein; Has 380 Blast hits to 268 proteins in 109
species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi -
73; Plants - 49; Viruses - 0; Other Eukaryotes - 13
(source: NCBI BLink).		 0.55 0.32 -0.34
77 AT1G48560 unknown protein; Has 75 Blast hits to 71 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.55 0.32 -0.33
78 AT3G47180 RING/U-box superfamily protein -0.55 0.29 -0.31
79 AT1G67070 Mannose-6-phosphate isomerase, type I DARK INDUCIBLE 9, PHOSPHOMANNOSE
ISOMERASE 2		 -0.54 0.31 -0.31
80 AT4G00240 phospholipase D beta 2 phospholipase D beta 2 -0.54 0.34 -0.33
81 AT5G52320 cytochrome P450, family 96, subfamily A, polypeptide 4 cytochrome P450, family 96,
subfamily A, polypeptide 4		 -0.54 0.33 -0.31
82 AT3G55180 alpha/beta-Hydrolases superfamily protein -0.53 0.34 -0.3
83 AT3G19400 Cysteine proteinases superfamily protein -0.53 0.33 -0.33
84 AT1G65170 Ubiquitin carboxyl-terminal hydrolase family protein -0.53 0.33 -0.32
85 AT1G07130 Nucleic acid-binding, OB-fold-like protein ATSTN1, STN1 -0.53 0.29 -0.33
86 AT3G03000 EF hand calcium-binding protein family -0.53 0.3 -0.33
87 AT4G38590 beta-galactosidase 14 beta-galactosidase 14 -0.52 0.29 -0.32
88 AT3G09960 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.52 0.33 -0.34
89 AT2G10880 transposable element gene -0.52 0.33 -0.29
90 AT3G02040 senescence-related gene 3 AtGDPD1, Glycerophosphodiester
phosphodiesterase 1,
senescence-related gene 3		 -0.52 0.31 -0.33
91 AT4G20000 VQ motif-containing protein -0.52 0.31 -0.33
92 AT2G11810 monogalactosyldiacylglycerol synthase type C ATMGD3, MONOGALACTOSYL
DIACYLGLYCEROL SYNTHASE 3,
monogalactosyldiacylglycerol
synthase type C		 -0.52 0.31 -0.33
93 AT2G26400 acireductone dioxygenase 3 ACIREDUCTONE DIOXYGENASE,
acireductone dioxygenase 3,
acireductone dioxygenase 3		 -0.52 0.3 -0.32
94 AT3G57630 exostosin family protein -0.52 0.32 -0.29
95 AT1G20350 translocase inner membrane subunit 17-1 translocase inner membrane subunit
17-1, translocase inner membrane
subunit 17-1		 -0.51 0.32 -0.31
96 AT1G06520 glycerol-3-phosphate acyltransferase 1 ATGPAT1, glycerol-3-phosphate
acyltransferase 1		 -0.51 0.32 -0.32
97 AT1G53990 GDSL-motif lipase 3 GDSL-motif lipase 3 -0.51 0.31 -0.31
98 AT1G30795 Glycine-rich protein family -0.5 0.31 -0.34
99 AT4G15210 beta-amylase 5 AT-BETA-AMY, ARABIDOPSIS THALIANA
BETA-AMYLASE, beta-amylase 5,
BMY1, REDUCED BETA AMYLASE 1		 -0.5 0.3 -0.31
100 AT3G23410 fatty alcohol oxidase 3 ARABIDOPSIS FATTY ALCOHOL OXIDASE
3, fatty alcohol oxidase 3		 -0.5 0.32 -0.3
101 AT3G05630 phospholipase D P2 PHOSPHOLIPASE D ZETA 2,
phospholipase D P2, PHOSPHOLIPASE
D ZETA 2		 -0.5 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
102 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		0.78 0.47 -0.42 C0228
103 C0131 Kaempferol-3-O-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside Kaempferol-3-glucoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) -0.73 0.45 -0.49 C0131