AT2G44980 : ALTERED SEED GERMINATION 3
Query Information
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AGICode AT2G44980
Description SNF2 domain-containing protein / helicase domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G44980 SNF2 domain-containing protein / helicase domain-containing
protein		 ALTERED SEED GERMINATION 3 1 0.32 -0.3
2 AT1G05805 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.73 0.33 -0.32
3 AT1G28200 FH interacting protein 1 FH interacting protein 1 -0.73 0.33 -0.3
4 AT5G52660 Homeodomain-like superfamily protein -0.72 0.32 -0.33
5 AT3G12560 TRF-like 9 TELOMERIC DNA-BINDING PROTEIN 2,
TRF-like 9		 0.72 0.33 -0.33
6 AT1G76130 alpha-amylase-like 2 alpha-amylase-like 2, ARABIDOPSIS
THALIANA ALPHA-AMYLASE-LIKE 2		 -0.71 0.31 -0.31
7 AT4G35860 GTP-binding 2 GTP-binding 2, ATRAB2C, ATRABB1B,
GTP-binding 2		 -0.71 0.31 -0.31
8 AT3G22260 Cysteine proteinases superfamily protein -0.71 0.32 -0.3
9 AT5G16830 syntaxin of plants 21 ATPEP12, ATSYP21, PEP12, PEP12P,
syntaxin of plants 21		 -0.7 0.32 -0.34
10 AT2G28630 3-ketoacyl-CoA synthase 12 3-ketoacyl-CoA synthase 12 0.7 0.31 -0.33
11 AT5G41560 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin
ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.7 0.31 -0.3
12 AT1G29980 Protein of unknown function, DUF642 0.7 0.31 -0.31
13 AT3G57090 Tetratricopeptide repeat (TPR)-like superfamily protein BIGYIN, FISSION 1A -0.69 0.32 -0.32
14 AT5G17450 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 21		 -0.69 0.33 -0.33
15 AT4G13270 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.69 0.29 -0.3
16 AT5G58670 phospholipase C1 ARABIDOPSIS THALIANA PHOSPHOLIPASE
C, phospholipase C1, phospholipase
C 1, phospholipase C1		 -0.69 0.33 -0.31
17 AT3G16650 Transducin/WD40 repeat-like superfamily protein 0.68 0.31 -0.3
18 AT4G01720 WRKY family transcription factor AtWRKY47, WRKY47 0.68 0.34 -0.33
19 AT2G47730 glutathione S-transferase phi 8 GLUTATHIONE S-TRANSFERASE (CLASS
PHI) 5, Arabidopsis thaliana
glutathione S-transferase phi 8,
GST6, glutathione S-transferase
phi 8		 -0.68 0.31 -0.33
20 AT1G75300 NmrA-like negative transcriptional regulator family protein -0.67 0.33 -0.31
21 AT5G49900 Beta-glucosidase, GBA2 type family protein -0.67 0.31 -0.31
22 AT3G14370 Protein kinase superfamily protein WAG2 0.67 0.31 -0.32
23 AT1G10940 Protein kinase superfamily protein ARABIDOPSIS SERINE/THREONINE
KINASE 1, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-4,
SNF1-related protein kinase 2.4,
SRK2A		 -0.67 0.31 -0.32
24 AT3G50070 CYCLIN D3;3 CYCLIN D3;3 0.66 0.31 -0.31
25 AT5G07820 Plant calmodulin-binding protein-related 0.66 0.32 -0.29
26 AT3G05880 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2A -0.66 0.32 -0.33
27 AT5G66810 CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif
(InterPro:IPR006595); BEST Arabidopsis thaliana protein
match is: LisH and RanBPM domains containing protein
(TAIR:AT1G61150.1); Has 333 Blast hits to 242 proteins in
88 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi
- 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30
(source: NCBI BLink).		 -0.66 0.32 -0.34
28 AT5G66350 Lateral root primordium (LRP) protein-related SHORT INTERNODES 0.66 0.31 -0.32
29 AT1G50110 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 0.66 0.32 -0.32
30 AT3G23280 XB3 ortholog 5 in Arabidopsis thaliana XB3 ortholog 5 in Arabidopsis
thaliana		 -0.65 0.33 -0.31
31 AT5G41350 RING/U-box superfamily protein -0.65 0.31 -0.3
32 AT1G74330 Protein kinase superfamily protein -0.65 0.32 -0.32
33 AT3G54990 Integrase-type DNA-binding superfamily protein SCHLAFMUTZE -0.65 0.32 -0.3
34 AT3G57800 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.65 0.3 -0.33
35 AT5G21060 Glyceraldehyde-3-phosphate dehydrogenase-like family
protein		 -0.64 0.31 -0.32
36 AT5G35320 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.64 0.33 -0.31
37 AT5G15870 glycosyl hydrolase family 81 protein -0.64 0.3 -0.34
38 AT5G09230 sirtuin 2 SIRTUIN 2, sirtuin 2 -0.64 0.31 -0.31
39 AT1G68740 EXS (ERD1/XPR1/SYG1) family protein PHO1;H1 0.64 0.32 -0.33
40 AT4G13160 Protein of unknown function, DUF593 -0.64 0.3 -0.3
41 AT1G75020 lysophosphatidyl acyltransferase 4 lysophosphatidyl acyltransferase 4 -0.64 0.32 -0.32
42 AT5G54310 ARF-GAP domain 5 ARF-GAP domain 5, NEVERSHED -0.63 0.31 -0.31
43 AT1G34340 alpha/beta-Hydrolases superfamily protein -0.63 0.31 -0.32
44 AT2G30270 Protein of unknown function (DUF567) -0.63 0.31 -0.3
45 AT1G32970 Subtilisin-like serine endopeptidase family protein -0.63 0.32 -0.34
46 AT5G01700 Protein phosphatase 2C family protein 0.63 0.3 -0.31
47 AT4G02640 bZIP transcription factor family protein Arabidopsis thaliana basic leucine
zipper 10, BZO2H1		 -0.63 0.32 -0.32
48 AT5G39850 Ribosomal protein S4 0.63 0.3 -0.3
49 AT4G17530 RAB GTPase homolog 1C RAB GTPase homolog 1C, ATRABD2C,
RAB1C, RAB GTPase homolog 1C		 -0.63 0.29 -0.31
50 AT3G26230 cytochrome P450, family 71, subfamily B, polypeptide 24 cytochrome P450, family 71,
subfamily B, polypeptide 24		 0.63 0.31 -0.31
51 AT4G15420 Ubiquitin fusion degradation UFD1 family protein -0.62 0.3 -0.32
52 AT3G43670 Copper amine oxidase family protein 0.62 0.35 -0.33
53 AT3G25220 FK506-binding protein 15 kD-1 FK506-binding protein 15 kD-1 -0.62 0.32 -0.31
54 AT1G54150 E3 Ubiquitin ligase family protein -0.62 0.31 -0.32
55 AT4G03400 Auxin-responsive GH3 family protein DWARF IN LIGHT 2, GH3-10 -0.62 0.31 -0.32
56 AT1G19710 UDP-Glycosyltransferase superfamily protein 0.62 0.33 -0.32
57 AT5G48880 peroxisomal 3-keto-acyl-CoA thiolase 2 3-KETO-ACYL-COENZYME A THIOLASE 5,
PEROXISOMAL-3-KETO-ACYL-COA
THIOLASE 1, peroxisomal
3-keto-acyl-CoA thiolase 2		 -0.62 0.33 -0.3
58 AT4G39840 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 20719 Blast hits to
6096 proteins in 607 species: Archae - 22; Bacteria - 3243;
Metazoa - 4364; Fungi - 2270; Plants - 237; Viruses - 128;
Other Eukaryotes - 10455 (source: NCBI BLink).		 0.62 0.33 -0.31
59 AT1G66100 Plant thionin -0.62 0.29 -0.32
60 AT3G49370 Calcium-dependent protein kinase (CDPK) family protein 0.62 0.3 -0.32
61 AT5G59480 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.62 0.3 -0.32
62 AT5G35460 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2838 (InterPro:IPR021261); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.31 -0.35
63 AT2G31955 cofactor of nitrate reductase and xanthine dehydrogenase 2 cofactor of nitrate reductase and
xanthine dehydrogenase 2		 -0.62 0.31 -0.3
64 AT1G77260 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.62 0.3 -0.31
65 AT1G60470 galactinol synthase 4 galactinol synthase 4, galactinol
synthase 4		 -0.62 0.3 -0.3
66 AT3G23930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: hypocotyl; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins
in 646 species: Archae - 82; Bacteria - 826; Metazoa -
5047; Fungi - 759; Plants - 314; Viruses - 86; Other
Eukaryotes - 3525 (source: NCBI BLink).		 0.61 0.32 -0.29
67 AT1G63480 AT hook motif DNA-binding family protein 0.61 0.32 -0.33
68 AT4G25835 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.31 -0.34
69 AT1G11710 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.3 -0.32
70 AT5G47600 HSP20-like chaperones superfamily protein 0.59 0.3 -0.31
71 AT2G23180 cytochrome P450, family 96, subfamily A, polypeptide 1 cytochrome P450, family 96,
subfamily A, polypeptide 1		 0.58 0.33 -0.31
72 AT5G01660 CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Development/cell death domain
(InterPro:IPR013989), Kelch related (InterPro:IPR013089),
Kelch-type beta propeller (InterPro:IPR015915); BEST
Arabidopsis thaliana protein match is: DCD (Development and
Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133
Blast hits to 7053 proteins in 482 species: Archae - 40;
Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants -
1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI
BLink).		 0.58 0.28 -0.32