AT2G12230 : -
Query Information
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AGICode AT2G12230
Description pseudogene, C-1-tetrahydrofolate synthase, blastp match of 91% identity and 2.9e-07 P-value to GP|9843502|emb|CAC03667.1||AL133260 dJ292B18.2 (novel protein similar to methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase (MTHFD1) (EC 1.5.1.5, EC 3.5.4.9, EC-TRUNCATED-
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G12230 pseudogene, C-1-tetrahydrofolate synthase, blastp match of
91% identity and 2.9e-07 P-value to
GP|9843502|emb|CAC03667.1||AL133260 dJ292B18.2 (novel
protein similar to methylenetetrahydrofolate dehydrogenase
(NADP+ dependent), methenyltetrahydrofolate cyclohydrolase,
formyltetrahydrofolate synthetase (MTHFD1) (EC 1.5.1.5, EC
3.5.4.9, EC-TRUNCATED-		 1 0.33 -0.34
2 AT1G35995 transposable element gene -0.73 0.32 -0.31
3 AT3G13820 F-box and associated interaction domains-containing protein 0.73 0.32 -0.3
4 AT3G10620 nudix hydrolase homolog 26 nudix hydrolase homolog 26, nudix
hydrolase homolog 26		 -0.71 0.3 -0.34
5 AT3G29670 HXXXD-type acyl-transferase family protein phenolic glucoside
malonyltransferase 2		 -0.7 0.32 -0.29
6 AT1G02050 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 6 0.69 0.3 -0.35
7 AT2G10970 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.69 0.29 -0.31
8 AT5G66430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.69 0.32 -0.32
9 AT4G05060 PapD-like superfamily protein -0.68 0.31 -0.31
10 AT3G43320 transposable element gene -0.68 0.31 -0.31
11 AT2G16010 transposable element gene -0.67 0.34 -0.33
12 AT1G34590 transposable element gene 0.67 0.35 -0.32
13 AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein -0.67 0.33 -0.3
14 ATMG00320 hypothetical protein ORF127 -0.66 0.32 -0.32
15 AT3G43140 transposable element gene 0.66 0.33 -0.33
16 AT2G14420 transposable element gene 0.66 0.32 -0.3
17 AT1G38340 transposable element gene 0.66 0.33 -0.3
18 AT1G52470 alpha/beta-Hydrolases superfamily protein -0.66 0.33 -0.31
19 AT1G17930 Aminotransferase-like, plant mobile domain family protein -0.66 0.33 -0.29
20 AT3G31915 transposable element gene -0.66 0.31 -0.31
21 AT1G74080 myb domain protein 122 MYB DOMAIN PROTEIN 122, myb domain
protein 122		 -0.65 0.31 -0.3
22 AT2G35730 Heavy metal transport/detoxification superfamily protein -0.65 0.32 -0.32
23 AT1G48670 auxin-responsive GH3 family protein 0.65 0.32 -0.31
24 AT2G46200 unknown protein; Has 2968 Blast hits to 2381 proteins in
310 species: Archae - 16; Bacteria - 188; Metazoa - 1070;
Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes -
1318 (source: NCBI BLink).		 0.65 0.3 -0.33
25 AT1G78750 F-box/RNI-like superfamily protein 0.65 0.3 -0.32
26 AT2G30400 ovate family protein 2 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 2, ovate family protein 2		 -0.65 0.31 -0.3
27 AT3G49510 F-box family protein -0.64 0.31 -0.32
28 AT3G49480 Protein with RNI-like/FBD-like domains -0.64 0.31 -0.32
29 AT3G55190 alpha/beta-Hydrolases superfamily protein 0.64 0.29 -0.33
30 AT5G17480 pollen calcium-binding protein 1 pollen calcium-binding protein 1,
pollen calcium-binding protein 1		 -0.63 0.31 -0.31
31 AT4G03840 transposable element gene -0.63 0.31 -0.3
32 AT2G23040 unknown protein; Has 8 Blast hits to 8 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.3 -0.33
33 AT1G56380 Mitochondrial transcription termination factor family
protein		 0.63 0.31 -0.32
34 AT1G10730 Clathrin adaptor complexes medium subunit family protein -0.63 0.33 -0.31
35 AT1G52820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.63 0.33 -0.31
36 AT4G34320 Protein of unknown function (DUF677) 0.63 0.33 -0.3
37 AT2G11220 transposable element gene -0.63 0.33 -0.34
38 AT3G20080 cytochrome P450, family 705, subfamily A, polypeptide 15 cytochrome P450, family 705,
subfamily A, polypeptide 15		 -0.62 0.31 -0.32
39 AT2G40440 BTB/POZ domain-containing protein 0.62 0.3 -0.32
40 AT5G06830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF773 (InterPro:IPR008491); Has 365 Blast
hits to 359 proteins in 109 species: Archae - 9; Bacteria -
13; Metazoa - 209; Fungi - 7; Plants - 47; Viruses - 0;
Other Eukaryotes - 80 (source: NCBI BLink).		 -0.62 0.32 -0.3
41 AT3G45730 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.31 -0.34
42 AT3G15730 phospholipase D alpha 1 PLD, phospholipase D alpha 1 -0.62 0.34 -0.34
43 AT4G16030 Ribosomal protein L19e family protein 0.61 0.3 -0.32
44 AT1G16490 myb domain protein 58 MYB DOMAIN PROTEIN 58, myb domain
protein 58		 -0.61 0.33 -0.31
45 AT5G51480 SKU5 similar 2 SKU5 similar 2 -0.61 0.31 -0.3
46 AT2G04020 GDSL-like Lipase/Acylhydrolase superfamily protein -0.61 0.33 -0.33
47 AT2G37800 Cysteine/Histidine-rich C1 domain family protein -0.61 0.31 -0.32
48 AT1G08080 alpha carbonic anhydrase 7 alpha carbonic anhydrase 7, A.
THALIANA ALPHA CARBONIC ANHYDRASE
7		 0.61 0.32 -0.32
49 AT1G39430 transposable element gene 0.61 0.3 -0.31
50 AT3G06120 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 MUTE -0.61 0.31 -0.31
51 AT4G26890 mitogen-activated protein kinase kinase kinase 16 mitogen-activated protein kinase
kinase kinase 16		 -0.61 0.31 -0.32
52 AT2G40210 AGAMOUS-like 48 AGAMOUS-like 48 0.61 0.29 -0.34
53 AT2G10920 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.3 -0.3
54 AT5G52870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G64080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 MEMBRANE-ASSOCIATED KINASE
REGULATOR 5		 -0.6 0.32 -0.3
55 AT2G37320 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.31 -0.3
56 AT4G04300 transposable element gene -0.6 0.3 -0.34
57 AT3G44830 Lecithin:cholesterol acyltransferase family protein -0.6 0.32 -0.31
58 AT2G06020 Homeodomain-like superfamily protein -0.6 0.32 -0.33
59 AT3G24515 ubiquitin-conjugating enzyme 37 ubiquitin-conjugating enzyme 37 0.6 0.32 -0.31
60 AT5G38670 Galactose oxidase/kelch repeat superfamily protein -0.6 0.31 -0.34
61 AT5G20690 Leucine-rich repeat protein kinase family protein 0.6 0.32 -0.33
62 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 -0.6 0.32 -0.32
63 AT5G35550 Duplicated homeodomain-like superfamily protein MYB DOMAIN PROTEIN 123, ATTT2, MYB
DOMAIN PROTEIN 123, TRANSPARENT
TESTA 2		 -0.6 0.31 -0.32
64 AT3G28960 Transmembrane amino acid transporter family protein 0.59 0.33 -0.32
65 AT5G12020 17.6 kDa class II heat shock protein 17.6 kDa class II heat shock
protein		 -0.59 0.32 -0.3
66 AT2G12320 transposable element gene 0.59 0.31 -0.31
67 AT3G58060 Cation efflux family protein -0.59 0.31 -0.31
68 AT5G43530 Helicase protein with RING/U-box domain -0.59 0.33 -0.31
69 AT1G68610 PLANT CADMIUM RESISTANCE 11 PLANT CADMIUM RESISTANCE 11 -0.59 0.32 -0.3
70 AT1G33860 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.59 0.32 -0.29
71 AT5G23890 LOCATED IN: mitochondrion, chloroplast thylakoid membrane,
chloroplast, plastid, chloroplast envelope; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G52410.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.31 -0.31
72 AT1G80870 Protein kinase superfamily protein 0.59 0.3 -0.32
73 AT2G03540 transposable element gene -0.59 0.32 -0.3
74 AT1G68875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 4 Blast hits to 4
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.58 0.34 -0.29
75 AT3G20900 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.31 -0.3
76 AT5G37590 Tetratricopeptide repeat (TPR)-like superfamily protein -0.58 0.31 -0.32
77 AT2G39540 Gibberellin-regulated family protein -0.58 0.32 -0.31
78 AT1G27070 5'-AMP-activated protein kinase-related -0.58 0.32 -0.34
79 AT4G27550 trehalose-6-phosphatase synthase S4 ARABIDOPSIS THALIANA TREHALOSE
PHOSPHATASE/SYNTHASE 4,
trehalose-6-phosphatase synthase
S4		 0.58 0.31 -0.34
80 AT2G01660 plasmodesmata-located protein 6 plasmodesmata-located protein 6 0.58 0.28 -0.32
81 AT3G12890 activator of spomin::LUC2 activator of spomin::LUC2 0.57 0.3 -0.3
82 AT1G28540 unknown protein; Has 25 Blast hits to 25 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.31 -0.29
83 AT4G14380 unknown protein; Has 22 Blast hits to 22 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1;
Plants - 18; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.57 0.31 -0.32
84 AT5G07880 synaptosomal-associated protein SNAP25-like 29 ARABIDOPSIS THALIANA
SYNAPTOSOMAL-ASSOCIATED PROTEIN
SNAP25-LIKE 29,
synaptosomal-associated protein
SNAP25-like 29		 0.57 0.32 -0.32
85 AT3G56670 BEST Arabidopsis thaliana protein match is: F-box and
associated interaction domains-containing protein
(TAIR:AT1G32420.1); Has 58 Blast hits to 47 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.31 -0.33
86 AT3G15310 transposable element gene 0.57 0.31 -0.31
87 AT4G03790 transposable element gene 0.57 0.32 -0.33
88 AT3G15870 Fatty acid desaturase family protein 0.57 0.32 -0.31
89 AT1G75890 GDSL-like Lipase/Acylhydrolase superfamily protein 0.57 0.33 -0.32
90 AT2G23400 Undecaprenyl pyrophosphate synthetase family protein 0.57 0.31 -0.32
91 AT5G19810 Proline-rich extensin-like family protein -0.57 0.31 -0.3
92 AT5G23270 sugar transporter 11 SUGAR TRANSPORTER 11, sugar
transporter 11		 -0.57 0.32 -0.32
93 AT1G26710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26720.1); Has 9 Blast hits to
9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.31 -0.32
94 AT2G22160 Cysteine proteinases superfamily protein 0.57 0.31 -0.29
95 AT1G03620 ELMO/CED-12 family protein 0.57 0.3 -0.33
96 AT3G46750 unknown protein; Has 2631 Blast hits to 1984 proteins in
271 species: Archae - 6; Bacteria - 163; Metazoa - 1232;
Fungi - 253; Plants - 141; Viruses - 8; Other Eukaryotes -
828 (source: NCBI BLink).		 -0.57 0.33 -0.32
97 AT1G51290 F-box and associated interaction domains-containing protein 0.56 0.31 -0.32