AT2G02270 : ATPP2-B3
Query Information
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AGICode AT2G02270
Description pseudogene, F-box protein (SKP1 interacting partner 3-related), contains similarity to SKP1 interacting partner 3 GI:10716951 from (Arabidopsis thaliana); blastp match of 37% identity and 4.7e-33 P-value to GP|28812128|dbj|BAC64996.1||AP004461 P0443G08.20 {Oryza sativa (japonica cultivar-group)}
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G02270 pseudogene, F-box protein (SKP1 interacting partner
3-related), contains similarity to SKP1 interacting partner
3 GI:10716951 from (Arabidopsis thaliana); blastp match of
37% identity and 4.7e-33 P-value to
GP|28812128|dbj|BAC64996.1||AP004461 P0443G08.20 {Oryza
sativa (japonica cultivar-group)}		 ATPP2-B3 1 0.3 -0.32
2 AT5G37660 plasmodesmata-located protein 7 plasmodesmata-located protein 7 -0.62 0.32 -0.33
3 AT3G03200 NAC domain containing protein 45 NAC domain containing protein 45,
NAC domain containing protein 45		 0.6 0.32 -0.33
4 AT2G19380 RNA recognition motif (RRM)-containing protein -0.58 0.32 -0.33
5 AT5G16950 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.57 0.32 -0.3
6 AT3G52450 plant U-box 22 plant U-box 22 -0.57 0.3 -0.31
7 AT2G47310 flowering time control protein-related / FCA gamma-related 0.57 0.3 -0.3
8 AT3G52610 unknown protein; Has 68 Blast hits to 67 proteins in 21
species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.56 0.32 -0.31
9 AT1G11940 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.56 0.31 -0.29
10 AT5G23320 homolog of yeast STE14 A ARABIDOPSIS THALIANA ISOPRENYL
CYSTEINE METHYLTRANSFERASE A,
LPHA-CARBOXYL METHYLTRANSFERASE,
ATSTE14, homolog of yeast STE14 A,
ISOPRENYL CYSTEINE
METHYLTRANSFERASE A, STE14,
homolog of yeast STE14 A		 0.54 0.28 -0.35
11 AT1G14220 Ribonuclease T2 family protein -0.54 0.31 -0.33
12 AT3G48710 DEK domain-containing chromatin associated protein 0.54 0.33 -0.3
13 AT4G02810 Protein of unknown function (DUF3049) FANTASTIC FOUR 1 -0.54 0.31 -0.32
14 AT4G08800 Protein kinase superfamily protein 0.54 0.33 -0.3
15 AT2G13730 transposable element gene -0.53 0.31 -0.3
16 AT4G16900 Disease resistance protein (TIR-NBS-LRR class) family 0.52 0.33 -0.32
17 AT1G76860 Small nuclear ribonucleoprotein family protein -0.52 0.33 -0.32
18 AT1G77830 RING/U-box superfamily protein -0.51 0.33 -0.32
19 AT2G18800 xyloglucan endotransglucosylase/hydrolase 21 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 21,
xyloglucan
endotransglucosylase/hydrolase 21		 -0.51 0.29 -0.32
20 AT4G16040 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.5 0.3 -0.32
21 AT5G28270 transposable element gene -0.5 0.31 -0.3
22 AT1G75050 Pathogenesis-related thaumatin superfamily protein 0.48 0.33 -0.34
23 AT5G51580 unknown protein; Has 8 Blast hits to 6 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source: NCBI
BLink).		 -0.48 0.32 -0.31
24 AT3G13660 Disease resistance-responsive (dirigent-like protein)
family protein		 0.48 0.33 -0.3
25 AT1G31050 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.48 0.33 -0.32
26 AT2G40790 C-terminal cysteine residue is changed to a serine 2 C-terminal cysteine residue is
changed to a serine 2, C-terminal
cysteine residue is changed to a
serine 2		 -0.47 0.31 -0.35
27 AT4G15870 terpene synthase 1 terpene synthase 1, terpene
synthase 1		 0.47 0.33 -0.31
28 AT4G28580 magnesium transport 5 ARABIDOPSIS THALIANA MAGNESIUM
TRANSPORT 5, magnesium transport
5, MRS2-6		 0.47 0.33 -0.32
29 AT4G04230 transposable element gene 0.46 0.31 -0.33
30 AT2G34820 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.46 0.32 -0.32
31 AT4G19510 Disease resistance protein (TIR-NBS-LRR class) -0.46 0.29 -0.34
32 AT4G32080 unknown protein; Has 7 Blast hits to 7 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.46 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
33 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.71 0.44 -0.45 C0099
34 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		0.64 0.43 -0.45 C0073
35 C0108 GMP - GMP guanine and guanosine salvage II,
guanosine nucleotides degradation I,
guanosine nucleotides degradation II,
guanine and guanosine salvage III,
purine nucleotides de novo biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification) 		-0.57 0.46 -0.47 C0108