AGICode | AT2G02370 |
Description | SNARE associated Golgi protein family |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G02370 | SNARE associated Golgi protein family | 1 | 0.34 | -0.33 | |||
2 | AT4G31550 | WRKY DNA-binding protein 11 | ATWRKY11, WRKY DNA-binding protein 11 |
0.88 | 0.33 | -0.33 | ||
3 | AT1G18470 | Transmembrane Fragile-X-F-associated protein | 0.86 | 0.3 | -0.31 | |||
4 | AT2G40270 | Protein kinase family protein | 0.85 | 0.31 | -0.34 | |||
5 | AT2G37860 | Protein of unknown function (DUF3411) | LOWER CELL DENSITY 1 | -0.83 | 0.34 | -0.3 | ||
6 | AT2G22300 | signal responsive 1 | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 3, signal responsive 1 |
0.83 | 0.29 | -0.31 | ||
7 | AT4G30210 | P450 reductase 2 | AR2, P450 reductase 2 | 0.83 | 0.32 | -0.32 | ||
8 | AT1G69890 | Protein of unknown function (DUF569) | 0.83 | 0.32 | -0.3 | |||
9 | AT1G70530 | cysteine-rich RLK (RECEPTOR-like protein kinase) 3 | cysteine-rich RLK (RECEPTOR-like protein kinase) 3 |
0.83 | 0.31 | -0.3 | ||
10 | AT3G26710 | cofactor assembly of complex C | cofactor assembly of complex C | -0.82 | 0.31 | -0.33 | ||
11 | AT1G49200 | RING/U-box superfamily protein | -0.82 | 0.31 | -0.32 | |||
12 | AT3G62110 | Pectin lyase-like superfamily protein | -0.82 | 0.31 | -0.32 | |||
13 | AT2G27830 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.82 | 0.32 | -0.31 | |||
14 | AT2G39050 | hydroxyproline-rich glycoprotein family protein | ArathEULS3, Euonymus lectin S3 | 0.81 | 0.32 | -0.33 | ||
15 | AT3G58610 | ketol-acid reductoisomerase | -0.81 | 0.33 | -0.32 | |||
16 | AT3G13310 | Chaperone DnaJ-domain superfamily protein | 0.81 | 0.31 | -0.3 | |||
17 | AT5G63790 | NAC domain containing protein 102 | NAC domain containing protein 102, NAC domain containing protein 102 |
0.81 | 0.33 | -0.33 | ||
18 | AT4G19100 | Protein of unknown function (DUF3464) | photosynthesis affected mutant 68 | -0.81 | 0.34 | -0.33 | ||
19 | AT5G42050 | DCD (Development and Cell Death) domain protein | 0.81 | 0.32 | -0.32 | |||
20 | AT3G52380 | chloroplast RNA-binding protein 33 | chloroplast RNA-binding protein 33, PIGMENT DEFECTIVE 322 |
-0.81 | 0.31 | -0.32 | ||
21 | AT1G72370 | 40s ribosomal protein SA | AP40, 40s ribosomal protein SA, RP40, RPSAA |
-0.81 | 0.32 | -0.31 | ||
22 | AT3G05290 | peroxisomal adenine nucleotide carrier 1 | AtPNC1, peroxisomal adenine nucleotide carrier 1 |
0.81 | 0.32 | -0.32 | ||
23 | AT1G14345 | NAD(P)-linked oxidoreductase superfamily protein | -0.81 | 0.33 | -0.31 | |||
24 | AT1G21450 | SCARECROW-like 1 | SCARECROW-like 1 | 0.8 | 0.32 | -0.31 | ||
25 | AT4G37800 | xyloglucan endotransglucosylase/hydrolase 7 | xyloglucan endotransglucosylase/hydrolase 7 |
-0.8 | 0.33 | -0.33 | ||
26 | AT1G16350 | Aldolase-type TIM barrel family protein | -0.8 | 0.32 | -0.3 | |||
27 | AT1G28050 | B-box type zinc finger protein with CCT domain | 0.8 | 0.34 | -0.32 | |||
28 | AT1G31130 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
0.79 | 0.31 | -0.33 | |||
29 | AT3G53430 | Ribosomal protein L11 family protein | -0.79 | 0.32 | -0.3 | |||
30 | AT3G62770 | Transducin/WD40 repeat-like superfamily protein | autophagy 18a, autophagy 18a | 0.79 | 0.34 | -0.32 | ||
31 | AT4G17230 | SCARECROW-like 13 | SCARECROW-like 13 | 0.79 | 0.31 | -0.35 | ||
32 | AT2G42890 | MEI2-like 2 | MEI2-like 2, MEI2-like 2 | 0.79 | 0.32 | -0.32 | ||
33 | AT4G35440 | chloride channel E | ATCLC-E, chloride channel E, CHLORIDE CHANNEL E |
-0.79 | 0.31 | -0.3 | ||
34 | AT5G27280 | Zim17-type zinc finger protein | 0.79 | 0.33 | -0.32 | |||
35 | AT3G06980 | DEA(D/H)-box RNA helicase family protein | -0.79 | 0.31 | -0.32 | |||
36 | AT5G46580 | pentatricopeptide (PPR) repeat-containing protein | -0.79 | 0.32 | -0.31 | |||
37 | AT5G66650 | Protein of unknown function (DUF607) | 0.78 | 0.31 | -0.32 | |||
38 | AT4G34390 | extra-large GTP-binding protein 2 | extra-large GTP-binding protein 2 | 0.78 | 0.31 | -0.3 | ||
39 | AT5G56710 | Ribosomal protein L31e family protein | -0.78 | 0.33 | -0.31 | |||
40 | AT4G27240 | zinc finger (C2H2 type) family protein | -0.78 | 0.31 | -0.32 | |||
41 | AT5G14100 | non-intrinsic ABC protein 14 | ATP-binding cassette I11, ARABIDOPSIS THALIANANON-INTRINSIC ABC PROTEIN 14, non-intrinsic ABC protein 14 |
-0.78 | 0.33 | -0.34 | ||
42 | AT4G30610 | alpha/beta-Hydrolases superfamily protein | BRI1 SUPPRESSOR 1, SERINE CARBOXYPEPTIDASE 24 PRECURSOR |
-0.78 | 0.3 | -0.3 | ||
43 | AT5G13200 | GRAM domain family protein | 0.78 | 0.33 | -0.31 | |||
44 | AT1G05840 | Eukaryotic aspartyl protease family protein | 0.78 | 0.31 | -0.3 | |||
45 | AT1G01720 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
Arabidopsis NAC domain containing protein 2, ATAF1 |
0.78 | 0.31 | -0.32 | ||
46 | AT4G33940 | RING/U-box superfamily protein | 0.78 | 0.29 | -0.35 | |||
47 | AT1G72520 | PLAT/LH2 domain-containing lipoxygenase family protein | Arabidopsis thaliana lipoxygenase 4, lipoxygenase 4 |
0.78 | 0.32 | -0.3 | ||
48 | AT2G17990 | BEST Arabidopsis thaliana protein match is: kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to 6129 proteins in 783 species: Archae - 220; Bacteria - 1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses - 38; Other Eukaryotes - 1653 (source: NCBI BLink). |
0.78 | 0.31 | -0.32 | |||
49 | AT5G63100 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.78 | 0.33 | -0.29 | |||
50 | AT4G16190 | Papain family cysteine protease | 0.78 | 0.33 | -0.3 | |||
51 | AT2G40760 | Rhodanese/Cell cycle control phosphatase superfamily protein |
-0.77 | 0.3 | -0.33 | |||
52 | AT4G37110 | Zinc-finger domain of monoamine-oxidase A repressor R1 | -0.77 | 0.29 | -0.29 | |||
53 | AT5G15200 | Ribosomal protein S4 | -0.77 | 0.32 | -0.31 | |||
54 | AT2G15620 | nitrite reductase 1 | ARABIDOPSIS THALIANA NITRITE REDUCTASE, NITRITE REDUCTASE, nitrite reductase 1 |
-0.77 | 0.32 | -0.31 | ||
55 | AT3G46740 | translocon at the outer envelope membrane of chloroplasts 75-III |
MODIFIER OF ARG1 1, translocon at the outer envelope membrane of chloroplasts 75-III |
-0.77 | 0.31 | -0.34 | ||
56 | AT4G30000 | Dihydropterin pyrophosphokinase / Dihydropteroate synthase | -0.77 | 0.31 | -0.33 | |||
57 | AT4G16110 | response regulator 2 | response regulator 2, response regulator 2 |
0.77 | 0.32 | -0.32 | ||
58 | AT1G60600 | UbiA prenyltransferase family protein | ABERRANT CHLOROPLAST DEVELOPMENT 4 | -0.77 | 0.32 | -0.31 | ||
59 | AT4G36830 | GNS1/SUR4 membrane protein family | HOS3-1 | 0.77 | 0.32 | -0.31 | ||
60 | AT1G21760 | F-box protein 7 | F-BOX PROTEIN 7, F-box protein 7 | 0.77 | 0.33 | -0.32 | ||
61 | AT3G49490 | unknown protein; Has 722 Blast hits to 186 proteins in 64 species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi - 48; Plants - 38; Viruses - 0; Other Eukaryotes - 534 (source: NCBI BLink). |
0.77 | 0.29 | -0.31 | |||
62 | AT4G20360 | RAB GTPase homolog E1B | ATRAB8D, RAB GTPase homolog E1B, RAB GTPase homolog E1B |
-0.77 | 0.29 | -0.33 | ||
63 | AT4G17390 | Ribosomal protein L23/L15e family protein | -0.77 | 0.31 | -0.32 | |||
64 | AT5G47070 | Protein kinase superfamily protein | 0.77 | 0.31 | -0.32 | |||
65 | AT1G75020 | lysophosphatidyl acyltransferase 4 | lysophosphatidyl acyltransferase 4 | 0.77 | 0.31 | -0.31 | ||
66 | AT5G61560 | U-box domain-containing protein kinase family protein | 0.77 | 0.32 | -0.31 | |||
67 | AT2G01180 | phosphatidic acid phosphatase 1 | ATLPP1, phosphatidic acid phosphatase 1, LIPID PHOSPHATE PHOSPHATASE 1, phosphatidic acid phosphatase 1 |
0.77 | 0.32 | -0.31 | ||
68 | AT4G25050 | acyl carrier protein 4 | acyl carrier protein 4 | -0.76 | 0.32 | -0.33 | ||
69 | AT3G09580 | FAD/NAD(P)-binding oxidoreductase family protein | -0.76 | 0.3 | -0.31 | |||
70 | AT4G39120 | myo-inositol monophosphatase like 2 | HISTIDINE BIOSYNTHESIS 7, myo-inositol monophosphatase like 2 |
-0.76 | 0.34 | -0.3 | ||
71 | AT2G37600 | Ribosomal protein L36e family protein | -0.76 | 0.33 | -0.32 | |||
72 | AT2G38170 | cation exchanger 1 | ATCAX1, cation exchanger 1, RARE COLD INDUCIBLE 4 |
-0.76 | 0.32 | -0.33 | ||
73 | AT3G07780 | Protein of unknown function (DUF1423) | OBERON1 | 0.76 | 0.33 | -0.32 | ||
74 | AT2G21540 | SEC14-like 3 | SEC14-LIKE 3, SEC14-like 3 | -0.76 | 0.33 | -0.29 | ||
75 | AT5G51110 | Transcriptional coactivator/pterin dehydratase | -0.76 | 0.3 | -0.32 | |||
76 | AT2G44640 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3769 (InterPro:IPR022244); BEST Arabidopsis thaliana protein match is: pigment defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.76 | 0.32 | -0.33 | |||
77 | AT1G54500 | Rubredoxin-like superfamily protein | -0.76 | 0.32 | -0.32 | |||
78 | AT1G29690 | MAC/Perforin domain-containing protein | constitutively activated cell death 1 |
0.76 | 0.31 | -0.33 | ||
79 | AT5G08050 | Protein of unknown function (DUF1118) | -0.76 | 0.3 | -0.33 | |||
80 | AT4G00370 | Major facilitator superfamily protein | ANTR2, anion transporter 2 | -0.76 | 0.3 | -0.32 | ||
81 | AT3G19850 | Phototropic-responsive NPH3 family protein | -0.76 | 0.34 | -0.31 | |||
82 | AT2G28605 | Photosystem II reaction center PsbP family protein | -0.76 | 0.3 | -0.33 | |||
83 | AT1G16390 | organic cation/carnitine transporter 3 | organic cation/carnitine transporter 3, organic cation/carnitine transporter 3 |
-0.76 | 0.33 | -0.32 | ||
84 | AT1G01970 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.76 | 0.32 | -0.32 | |||
85 | AT3G21300 | RNA methyltransferase family protein | -0.76 | 0.34 | -0.29 | |||
86 | AT3G45040 | phosphatidate cytidylyltransferase family protein | 0.76 | 0.3 | -0.32 | |||
87 | AT1G68910 | WPP domain-interacting protein 2 | WPP domain-interacting protein 2 | 0.76 | 0.31 | -0.3 | ||
88 | AT1G68590 | Ribosomal protein PSRP-3/Ycf65 | -0.76 | 0.32 | -0.31 | |||
89 | AT2G33180 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
-0.76 | 0.3 | -0.3 | |||
90 | AT1G07370 | proliferating cellular nuclear antigen 1 | PROLIFERATING CELLULAR NUCLEAR ANTIGEN 1, proliferating cellular nuclear antigen 1 |
-0.76 | 0.34 | -0.32 | ||
91 | AT5G61000 | Replication factor-A protein 1-related | ATRPA70D, RPA70D | -0.76 | 0.32 | -0.32 | ||
92 | AT2G34480 | Ribosomal protein L18ae/LX family protein | -0.76 | 0.32 | -0.34 | |||
93 | AT4G34730 | ribosome-binding factor A family protein | -0.75 | 0.31 | -0.31 | |||
94 | AT1G63940 | monodehydroascorbate reductase 6 | monodehydroascorbate reductase 6 | -0.75 | 0.33 | -0.31 | ||
95 | AT3G02450 | cell division protein ftsH, putative | -0.75 | 0.31 | -0.3 | |||
96 | AT1G18080 | Transducin/WD40 repeat-like superfamily protein | ATARCA, RACK1A, RECEPTOR FOR ACTIVATED C KINASE 1 A |
-0.75 | 0.34 | -0.28 | ||
97 | AT3G52580 | Ribosomal protein S11 family protein | -0.75 | 0.33 | -0.29 | |||
98 | AT4G38970 | fructose-bisphosphate aldolase 2 | fructose-bisphosphate aldolase 2 | -0.75 | 0.3 | -0.31 | ||
99 | AT3G23805 | ralf-like 24 | ralf-like 24 | -0.75 | 0.33 | -0.3 | ||
100 | AT1G07450 | NAD(P)-binding Rossmann-fold superfamily protein | -0.75 | 0.3 | -0.31 | |||
101 | AT5G27440 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, shoot, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.75 | 0.31 | -0.3 | |||
102 | AT1G73080 | PEP1 receptor 1 | PEP1 RECEPTOR 1, PEP1 receptor 1 | 0.75 | 0.32 | -0.31 | ||
103 | AT5G07900 | Mitochondrial transcription termination factor family protein |
-0.75 | 0.3 | -0.29 | |||
104 | AT1G53520 | Chalcone-flavanone isomerase family protein | -0.75 | 0.31 | -0.31 | |||
105 | AT4G38160 | Mitochondrial transcription termination factor family protein |
pigment defective 191 | -0.75 | 0.29 | -0.32 | ||
106 | AT3G52800 | A20/AN1-like zinc finger family protein | 0.75 | 0.31 | -0.31 | |||
107 | AT2G38470 | WRKY DNA-binding protein 33 | WRKY DNA-BINDING PROTEIN 33, WRKY DNA-binding protein 33 |
0.75 | 0.33 | -0.33 | ||
108 | AT4G24930 | thylakoid lumenal 17.9 kDa protein, chloroplast | -0.75 | 0.31 | -0.29 | |||
109 | AT1G70985 | hydroxyproline-rich glycoprotein family protein | -0.75 | 0.31 | -0.31 | |||
110 | AT3G04790 | Ribose 5-phosphate isomerase, type A protein | EMBRYO DEFECTIVE 3119 | -0.74 | 0.32 | -0.31 | ||
111 | AT1G28380 | MAC/Perforin domain-containing protein | necrotic spotted lesions 1 | 0.74 | 0.31 | -0.31 | ||
112 | AT1G66570 | sucrose-proton symporter 7 | sucrose-proton symporter 7, sucrose-proton symporter 7 |
0.74 | 0.33 | -0.32 | ||
113 | AT3G08760 | Protein kinase superfamily protein | ATSIK | 0.74 | 0.32 | -0.3 | ||
114 | AT1G05700 | Leucine-rich repeat transmembrane protein kinase protein | -0.74 | 0.32 | -0.34 | |||
115 | AT2G01250 | Ribosomal protein L30/L7 family protein | -0.74 | 0.32 | -0.3 | |||
116 | AT2G43290 | Calcium-binding EF-hand family protein | multicopy suppressors of snf4 deficiency in yeast 3 |
0.74 | 0.33 | -0.32 | ||
117 | AT5G66470 | RNA binding;GTP binding | -0.74 | 0.31 | -0.31 | |||
118 | AT3G53460 | chloroplast RNA-binding protein 29 | chloroplast RNA-binding protein 29 | -0.74 | 0.32 | -0.31 | ||
119 | AT1G02970 | WEE1 kinase homolog | ATWEE1, WEE1 kinase homolog | -0.74 | 0.32 | -0.32 | ||
120 | AT5G11450 | Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein |
PsbP domain protein 5 | -0.74 | 0.33 | -0.31 | ||
121 | AT1G55110 | indeterminate(ID)-domain 7 | indeterminate(ID)-domain 7, indeterminate(ID)-domain 7 |
0.74 | 0.34 | -0.33 | ||
122 | AT2G33430 | differentiation and greening-like 1 | DIFFERENTIATION AND GREENING-LIKE, differentiation and greening-like 1 |
-0.74 | 0.31 | -0.32 | ||
123 | AT4G14890 | 2Fe-2S ferredoxin-like superfamily protein | ferredoxin C 2 | -0.74 | 0.32 | -0.3 | ||
124 | AT1G59910 | Actin-binding FH2 (formin homology 2) family protein | 0.74 | 0.3 | -0.3 | |||
125 | AT1G60950 | 2Fe-2S ferredoxin-like superfamily protein | FERREDOXIN 2, FED A | -0.74 | 0.32 | -0.32 | ||
126 | AT2G17240 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24506.1); Has 2795 Blast hits to 943 proteins in 155 species: Archae - 0; Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153; Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink). |
-0.74 | 0.29 | -0.29 | |||
127 | AT1G64680 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). |
-0.74 | 0.32 | -0.31 | |||
128 | AT4G30390 | unknown protein; Has 22 Blast hits to 22 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.74 | 0.3 | -0.32 | |||
129 | AT2G26500 | cytochrome b6f complex subunit (petM), putative | -0.74 | 0.3 | -0.32 | |||
130 | AT5G65010 | asparagine synthetase 2 | asparagine synthetase 2 | -0.74 | 0.31 | -0.32 | ||
131 | AT4G31850 | proton gradient regulation 3 | proton gradient regulation 3 | -0.74 | 0.32 | -0.32 | ||
132 | AT5G66070 | RING/U-box superfamily protein | 0.73 | 0.32 | -0.32 | |||
133 | AT3G54200 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
0.73 | 0.34 | -0.3 | |||
134 | AT4G18880 | heat shock transcription factor A4A | ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A4A, heat shock transcription factor A4A |
0.73 | 0.31 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
135 | C0051 | Aconitic acid | cis-Aconitic acid | cis-Aconitate | glutamine biosynthesis III, TCA cycle variation V (plant), glyoxylate cycle, TCA cycle variation III (eukaryotic) |
0.75 | 0.46 | -0.43 |