AGICode | AT2G39090 |
Description | tetratricopeptide repeat (TPR)-containing protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G39090 | tetratricopeptide repeat (TPR)-containing protein | anaphase-promoting complex 7, AtAPC7 |
1 | 0.33 | -0.32 | ||
2 | AT5G49120 | Protein of unknown function (DUF581) | 0.66 | 0.34 | -0.32 | |||
3 | AT4G33650 | dynamin-related protein 3A | ARABIDOPSIS DYNAMIN-LIKE 2, ABERRANT PEROXISOME MORPHOLOGY 1, dynamin-related protein 3A |
-0.63 | 0.32 | -0.31 | ||
4 | AT1G21630 | Calcium-binding EF hand family protein | -0.63 | 0.33 | -0.3 | |||
5 | AT4G19670 | RING/U-box superfamily protein | 0.63 | 0.31 | -0.33 | |||
6 | AT1G04860 | ubiquitin-specific protease 2 | ATUBP2, ubiquitin-specific protease 2 |
-0.62 | 0.3 | -0.3 | ||
7 | AT1G59580 | mitogen-activated protein kinase homolog 2 | mitogen-activated protein kinase homolog 2, mitogen-activated protein kinase homolog 2 |
0.61 | 0.32 | -0.32 | ||
8 | AT2G32730 | 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit |
-0.6 | 0.31 | -0.33 | |||
9 | AT1G14650 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein |
-0.59 | 0.31 | -0.29 | |||
10 | AT1G53710 | Calcineurin-like metallo-phosphoesterase superfamily protein |
0.59 | 0.32 | -0.31 | |||
11 | AT3G07610 | Transcription factor jumonji (jmjC) domain-containing protein |
increase in bonsai methylation 1 | -0.59 | 0.29 | -0.32 | ||
12 | AT3G13062 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.59 | 0.31 | -0.31 | |||
13 | AT5G13270 | Pentatricopeptide repeat (PPR) superfamily protein | REQUIRED FOR ACCD RNA EDITING 1 | -0.58 | 0.33 | -0.31 | ||
14 | AT4G30150 | CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink). |
-0.58 | 0.31 | -0.31 | |||
15 | AT1G73760 | RING/U-box superfamily protein | -0.58 | 0.32 | -0.33 | |||
16 | AT5G56610 | Phosphotyrosine protein phosphatases superfamily protein | 0.57 | 0.32 | -0.31 | |||
17 | AT4G09510 | cytosolic invertase 2 | alkaline/neutral invertase I, cytosolic invertase 2 |
-0.57 | 0.3 | -0.3 | ||
18 | AT5G55130 | co-factor for nitrate, reductase and xanthine dehydrogenase 5 |
co-factor for nitrate, reductase and xanthine dehydrogenase 5, SIRTINOL RESISTANT 1 |
0.57 | 0.32 | -0.33 | ||
19 | AT3G57890 | Tubulin binding cofactor C domain-containing protein | -0.57 | 0.31 | -0.34 | |||
20 | AT1G12790 | CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.32 | -0.3 | |||
21 | AT4G04790 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.55 | 0.3 | -0.32 | |||
22 | AT2G10070 | transposable element gene | -0.55 | 0.31 | -0.32 | |||
23 | AT4G18520 | Pentatricopeptide repeat (PPR) superfamily protein | -0.55 | 0.31 | -0.31 | |||
24 | AT2G18470 | roline-rich extensin-like receptor kinase 4 | proline-rich extensin-like receptor kinase 4, proline-rich extensin-like receptor kinase 4 |
0.55 | 0.3 | -0.3 | ||
25 | AT3G26220 | cytochrome P450, family 71, subfamily B, polypeptide 3 | cytochrome P450, family 71, subfamily B, polypeptide 3 |
0.55 | 0.32 | -0.31 | ||
26 | AT2G16920 | ubiquitin-conjugating enzyme 23 | PHO2 FAMILY UBIQUITIN CONJUGATION ENZYME 2, ubiquitin-conjugating enzyme 23 |
-0.55 | 0.32 | -0.28 | ||
27 | AT5G49500 | Signal recognition particle, SRP54 subunit protein | 0.54 | 0.32 | -0.3 | |||
28 | AT1G11380 | PLAC8 family protein | 0.54 | 0.29 | -0.3 | |||
29 | AT1G06450 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.54 | 0.29 | -0.33 | |||
30 | AT2G32750 | Exostosin family protein | -0.54 | 0.31 | -0.31 | |||
31 | AT1G68060 | microtubule-associated proteins 70-1 | microtubule-associated proteins 70-1, microtubule-associated proteins 70-1 |
-0.53 | 0.32 | -0.31 | ||
32 | AT2G30280 | RNA-directed DNA methylation 4 | DEFECTIVE IN MERISTEM SILENCING 4, RNA-directed DNA methylation 4 |
0.53 | 0.32 | -0.3 | ||
33 | AT1G63500 | Protein kinase protein with tetratricopeptide repeat domain | -0.53 | 0.33 | -0.3 | |||
34 | AT4G32410 | cellulose synthase 1 | CELLULOSE SYNTHASE 1, cellulose synthase 1, RADIALLY SWOLLEN 1 |
-0.52 | 0.32 | -0.33 | ||
35 | AT5G62320 | myb domain protein 99 | myb domain protein 99, ATMYBCU15, myb domain protein 99 |
-0.52 | 0.31 | -0.32 | ||
36 | AT1G78930 | Mitochondrial transcription termination factor family protein |
-0.52 | 0.31 | -0.32 | |||
37 | AT5G15010 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.52 | 0.3 | -0.31 | |||
38 | AT5G42920 | THO complex, subunit 5 | AtTHO5, THO5 | -0.52 | 0.33 | -0.32 | ||
39 | AT1G73310 | serine carboxypeptidase-like 4 | serine carboxypeptidase-like 4 | -0.52 | 0.3 | -0.32 | ||
40 | AT5G17030 | UDP-glucosyl transferase 78D3 | UDP-glucosyl transferase 78D3 | -0.52 | 0.33 | -0.31 | ||
41 | AT2G07520 | transposable element gene | -0.52 | 0.32 | -0.3 | |||
42 | AT4G21490 | NAD(P)H dehydrogenase B3 | NAD(P)H dehydrogenase B3 | -0.52 | 0.3 | -0.32 | ||
43 | AT5G18540 | unknown protein; Has 2026 Blast hits to 792 proteins in 129 species: Archae - 2; Bacteria - 12; Metazoa - 1126; Fungi - 267; Plants - 292; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). |
-0.51 | 0.3 | -0.3 | |||
44 | AT4G10890 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.51 | 0.31 | -0.31 | |||
45 | AT3G03580 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.51 | 0.3 | -0.3 | |||
46 | AT3G42950 | Pectin lyase-like superfamily protein | -0.51 | 0.3 | -0.29 | |||
47 | AT3G05800 | AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 |
AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 |
-0.51 | 0.32 | -0.31 | ||
48 | AT4G23660 | polyprenyltransferase 1 | polyprenyltransferase 1, polyprenyltransferase 1 |
0.51 | 0.34 | -0.32 | ||
49 | AT1G14770 | RING/FYVE/PHD zinc finger superfamily protein | 0.51 | 0.31 | -0.32 | |||
50 | AT5G24940 | Protein phosphatase 2C family protein | -0.5 | 0.32 | -0.3 | |||
51 | AT5G11990 | proline-rich family protein | -0.5 | 0.32 | -0.33 | |||
52 | AT1G74870 | RING/U-box superfamily protein | -0.5 | 0.32 | -0.31 | |||
53 | AT1G67540 | unknown protein; Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.5 | 0.35 | -0.29 | |||
54 | AT5G06970 | Protein of unknown function (DUF810) | -0.5 | 0.3 | -0.31 | |||
55 | AT4G14610 | pseudogene, disease resistance protein (CC-NBS-LRR class), putative, domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein.; blastp match of 45% identity and 2.2e-162 P-value to GP|24461866|gb|AAN62353.1|AF506028_20|AF506028 NBS-LRR type disease resistance protein {Poncirus trifoliata} |
0.5 | 0.29 | -0.31 | |||
56 | AT2G42520 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.5 | 0.3 | -0.31 | |||
57 | AT1G70060 | SIN3-like 4 | SIN3-like 4 | -0.5 | 0.3 | -0.3 | ||
58 | AT1G73370 | sucrose synthase 6 | ARABIDOPSIS THALIANA SUCROSE SYNTHASE 6, sucrose synthase 6 |
-0.5 | 0.33 | -0.32 | ||
59 | AT3G32040 | Terpenoid synthases superfamily protein | 0.49 | 0.31 | -0.31 | |||
60 | AT5G42955 | Protein of unknown function (DUF784) | 0.49 | 0.31 | -0.29 | |||
61 | AT3G57260 | beta-1,3-glucanase 2 | AtPR2, BETA-1,3-GLUCANASE 2, beta-1,3-glucanase 2, PATHOGENESIS-RELATED PROTEIN 2, PATHOGENESIS-RELATED PROTEIN 2 |
0.49 | 0.3 | -0.3 | ||
62 | AT1G71160 | 3-ketoacyl-CoA synthase 7 | 3-ketoacyl-CoA synthase 7 | 0.48 | 0.34 | -0.31 | ||
63 | AT1G78710 | TRICHOME BIREFRINGENCE-LIKE 42 | TRICHOME BIREFRINGENCE-LIKE 42 | 0.48 | 0.31 | -0.32 | ||
64 | AT5G07520 | glycine-rich protein 18 | ATGRP-8, ATGRP18, glycine-rich protein 18 |
0.47 | 0.29 | -0.31 | ||
65 | AT1G80140 | Pectin lyase-like superfamily protein | 0.47 | 0.3 | -0.35 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
66 | C0215 | PR_MST_2527.1 | - | - | - | -0.69 | 0.43 | -0.47 | ||
67 | C0086 | Disinapylspermidine | - | - | - | -0.66 | 0.45 | -0.47 | ||
68 | C0173 | MST_2301.7 | - | - | - | -0.64 | 0.46 | -0.42 | ||
69 | C0213 | PR_MST_2410.2 | - | - | - | -0.64 | 0.44 | -0.45 | ||
70 | C0089 | Fortunellin | - | - | - | -0.58 | 0.42 | -0.43 | ||
71 | C0002 | α-Lipoic acid | (+/-)-α-Lipoic acid | Lipoate | cofactor of fatty acid biosynthesis | -0.57 | 0.44 | -0.45 |