AT2G39120 : what's this factor 9
Query Information
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AGICode AT2G39120
Description Ubiquitin carboxyl-terminal hydrolase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G39120 Ubiquitin carboxyl-terminal hydrolase family protein what's this factor 9 1 0.3 -0.3
2 AT5G02820 Spo11/DNA topoisomerase VI, subunit A protein BRASSINOSTEROID INSENSITIVE 5,
ROOT HAIRLESS 2		 0.78 0.32 -0.31
3 AT2G35030 Pentatricopeptide repeat (PPR) superfamily protein 0.77 0.32 -0.33
4 AT3G30843 transposable element gene 0.76 0.3 -0.32
5 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.32 -0.3
6 AT4G31680 Transcriptional factor B3 family protein -0.72 0.3 -0.31
7 AT2G05820 transposable element gene -0.71 0.35 -0.31
8 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.31 -0.31
9 AT1G65220 ARM repeat superfamily protein 0.7 0.31 -0.31
10 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein 0.7 0.32 -0.31
11 AT1G07420 sterol 4-alpha-methyl-oxidase 2-1 Arabidopsis thaliana sterol
4-alpha-methyl oxidase 1, sterol
4-alpha-methyl-oxidase 2-1		 0.69 0.32 -0.3
12 AT4G25940 ENTH/ANTH/VHS superfamily protein -0.69 0.29 -0.33
13 AT4G15230 pleiotropic drug resistance 2 ATP-binding cassette G30, ATPDR2,
pleiotropic drug resistance 2		 0.69 0.33 -0.32
14 AT3G51550 Malectin/receptor-like protein kinase family protein FERONIA 0.68 0.32 -0.32
15 AT2G01610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.68 0.31 -0.32
16 AT3G25050 xyloglucan endotransglucosylase/hydrolase 3 xyloglucan
endotransglucosylase/hydrolase 3		 -0.67 0.33 -0.33
17 AT3G04820 Pseudouridine synthase family protein 0.67 0.3 -0.31
18 AT2G23390 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF482 (InterPro:IPR007434), Acyl-CoA N-acyltransferase
(InterPro:IPR016181); Has 2165 Blast hits to 2163 proteins
in 543 species: Archae - 0; Bacteria - 1044; Metazoa - 0;
Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes -
1088 (source: NCBI BLink).		 -0.66 0.32 -0.32
19 AT3G22670 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.32 -0.34
20 AT3G44630 Disease resistance protein (TIR-NBS-LRR class) family -0.66 0.31 -0.31
21 AT1G26270 Phosphatidylinositol 3- and 4-kinase family protein 0.65 0.31 -0.3
22 AT5G42950 GYF domain-containing protein 0.65 0.32 -0.31
23 AT4G29940 pathogenesis related homeodomain protein A pathogenesis related homeodomain
protein A		 0.65 0.29 -0.31
24 AT4G34400 AP2/B3-like transcriptional factor family protein -0.65 0.3 -0.31
25 AT2G01390 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 3111 -0.65 0.3 -0.33
26 AT1G05690 BTB and TAZ domain protein 3 BTB and TAZ domain protein 3 -0.64 0.31 -0.28
27 AT2G15580 RING/U-box superfamily protein -0.64 0.33 -0.3
28 AT5G49410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.64 0.31 -0.3
29 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein 0.64 0.29 -0.3
30 AT3G24010 RING/FYVE/PHD zinc finger superfamily protein ARABIDOPSIS THALIANA INHIBITOR OF
GROWTH 1, INHIBITOR OF GROWTH 1		 -0.64 0.32 -0.3
31 AT5G17150 Cystatin/monellin superfamily protein -0.64 0.34 -0.32
32 AT3G43680 transposable element gene 0.64 0.3 -0.34
33 AT4G17060 FRIGIDA interacting protein 2 FRIGIDA interacting protein 2 0.63 0.3 -0.32
34 AT2G07680 multidrug resistance-associated protein 11 ATP-binding cassette C13,
multidrug resistance-associated
protein 11, multidrug
resistance-associated protein 11		 -0.63 0.31 -0.32
35 AT3G28960 Transmembrane amino acid transporter family protein -0.63 0.3 -0.31
36 AT3G06940 transposable element gene 0.63 0.29 -0.34
37 AT3G24330 O-Glycosyl hydrolases family 17 protein -0.63 0.3 -0.31
38 AT2G30380 Plant protein of unknown function (DUF641) -0.63 0.33 -0.3
39 AT1G09570 phytochrome A FAR RED ELONGATED HYPOCOTYL 2, FAR
RED ELONGATED 1, ELONGATED
HYPOCOTYL 8, phytochrome A		 0.63 0.33 -0.32
40 AT1G77120 alcohol dehydrogenase 1 ALCOHOL DEHYDROGENASE, alcohol
dehydrogenase 1, ARABIDOPSIS
THALIANA ALCOHOL DEHYDROGENASE,
ATADH1		 0.63 0.32 -0.29
41 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.62 0.32 -0.31
42 AT5G11390 WPP domain-interacting protein 1 WPP domain-interacting protein 1 0.62 0.31 -0.33
43 AT4G04300 transposable element gene 0.62 0.32 -0.31
44 AT3G15390 silencing defective 5 silencing defective 5 -0.62 0.32 -0.32
45 AT3G18710 plant U-box 29 ARABIDOPSIS THALIANA PLANT U-BOX
29, plant U-box 29		 -0.62 0.31 -0.31
46 AT1G17210 IAP-like protein 1 ARABIDOPSIS IAP-LIKE PROTEIN,
IAP-like protein 1		 0.62 0.33 -0.31
47 AT2G19400 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 -0.62 0.31 -0.33
48 AT5G49110 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
cultured cell; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.62 0.33 -0.3
49 AT1G17600 Disease resistance protein (TIR-NBS-LRR class) family -0.62 0.3 -0.32
50 AT3G01580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.31 -0.34
51 AT2G41120 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF309
(InterPro:IPR005500); Has 349 Blast hits to 349 proteins in
112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi
- 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127
(source: NCBI BLink).		 -0.61 0.3 -0.32
52 AT3G15220 Protein kinase superfamily protein -0.61 0.33 -0.31
53 AT2G15325 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.61 0.3 -0.32
54 AT5G43670 Sec23/Sec24 protein transport family protein 0.61 0.29 -0.3
55 AT2G07330 transposable element gene 0.61 0.32 -0.31
56 AT1G38340 transposable element gene -0.61 0.29 -0.34
57 AT2G42520 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.61 0.32 -0.31
58 AT1G78020 Protein of unknown function (DUF581) -0.61 0.33 -0.32
59 AT1G48560 unknown protein; Has 75 Blast hits to 71 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.61 0.32 -0.3
60 AT2G30800 helicase in vascular tissue and tapetum ATVT-1, helicase in vascular
tissue and tapetum		 0.6 0.31 -0.32
61 AT1G06270 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.31 -0.31
62 AT2G15930 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.3 -0.32
63 AT4G32220 transposable element gene 0.6 0.32 -0.31
64 AT2G15740 C2H2-like zinc finger protein -0.6 0.3 -0.29
65 AT2G15510 transposable element gene 0.6 0.32 -0.32
66 AT1G68875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 4 Blast hits to 4
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.59 0.29 -0.31
67 AT3G30380 alpha/beta-Hydrolases superfamily protein 0.59 0.31 -0.32
68 AT3G19160 ATP/ADP isopentenyltransferases ATP/ADP isopentenyltransferases,
ATP/ADP isopentenyltransferases,
isopentenyltransferase 8, PGA22		 0.59 0.3 -0.3
69 AT3G11350 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.31 -0.29
70 AT4G04550 transposable element gene 0.59 0.31 -0.32
71 AT1G17070 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 0.59 0.32 -0.31
72 AT3G16280 Integrase-type DNA-binding superfamily protein -0.59 0.32 -0.33
73 AT1G70460 root hair specific 10 proline-rich extensin-like
receptor kinase 13, proline-rich
extensin-like receptor kinase 13,
root hair specific 10		 0.59 0.32 -0.32
74 AT2G21070 methyltransferases FIONA1 0.59 0.31 -0.3
75 AT2G27940 RING/U-box superfamily protein -0.58 0.32 -0.32
76 AT3G06080 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 10 -0.58 0.32 -0.29
77 AT4G33710 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.58 0.3 -0.33
78 AT3G42120 transposable element gene 0.58 0.33 -0.3
79 AT1G57906 unknown protein; BEST Arabidopsis thaliana protein match
is: F-box family protein with a domain of unknown function
(DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.58 0.3 -0.32
80 AT4G40070 RING/U-box superfamily protein 0.58 0.29 -0.32
81 AT1G26600 CLAVATA3/ESR-RELATED 9 CLAVATA3/ESR-RELATED 9 -0.58 0.31 -0.3
82 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 -0.58 0.34 -0.29
83 AT4G34940 armadillo repeat only 1 armadillo repeat only 1 0.58 0.29 -0.32
84 AT5G60760 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.58 0.34 -0.31
85 AT4G35550 WUSCHEL related homeobox 13 ATWOX13, HB-4, WUSCHEL related
homeobox 13		 -0.58 0.33 -0.32
86 AT5G43480 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.58 0.31 -0.3
87 AT5G67550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: 4 anthesis; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits
to 154 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.32 -0.28
88 AT5G58120 Disease resistance protein (TIR-NBS-LRR class) family -0.58 0.3 -0.31
89 AT4G16030 Ribosomal protein L19e family protein -0.57 0.32 -0.33
90 AT2G06510 replication protein A 1A ARABIDOPSIS THALIANA REPLICATION
PROTEIN A 1A, ARABIDOPSIS THALIANA
RPA70-KDA SUBUNIT A, replication
protein A 1A, RPA70-KDA SUBUNIT A		 0.57 0.32 -0.31
91 AT4G19670 RING/U-box superfamily protein -0.57 0.31 -0.34
92 AT4G16180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G28720.1); Has 5 Blast hits to 5
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.57 0.31 -0.32
93 AT1G15920 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.57 0.31 -0.32
94 AT4G13480 myb domain protein 79 myb domain protein 79, myb domain
protein 79		 0.57 0.3 -0.3
95 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.57 0.34 -0.32
96 AT2G36560 AT hook motif DNA-binding family protein 0.57 0.29 -0.31
97 AT5G44280 RING 1A ARABIDOPSIS THALIANA RING 1A, RING
1A		 0.57 0.33 -0.32
98 AT5G14970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits
to 397 proteins in 95 species: Archae - 0; Bacteria - 294;
Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other
Eukaryotes - 199 (source: NCBI BLink).		 -0.57 0.29 -0.34
99 AT1G51670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48180.1); Has 37 Blast hits
to 37 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.34 -0.32
100 AT4G28430 Reticulon family protein -0.56 0.31 -0.3
101 AT3G15050 IQ-domain 10 IQ-domain 10 -0.56 0.32 -0.31
102 AT2G34315 Avirulence induced gene (AIG1) family protein -0.56 0.33 -0.32
103 AT1G22810 Integrase-type DNA-binding superfamily protein -0.56 0.32 -0.29
104 AT1G68040 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.56 0.29 -0.31
105 AT3G27540 beta-1,4-N-acetylglucosaminyltransferase family protein -0.56 0.32 -0.32
106 AT2G29510 Protein of unknown function (DUF3527) -0.55 0.34 -0.32
107 AT1G24000 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.55 0.31 -0.29
108 AT1G53820 RING/U-box superfamily protein -0.55 0.3 -0.31
109 AT4G19660 NPR1-like protein 4 ATNPR4, NPR1-like protein 4 -0.55 0.33 -0.31
110 AT5G37450 Leucine-rich repeat protein kinase family protein -0.55 0.31 -0.33
111 AT3G53570 FUS3-complementing gene 1 FUS3-complementing gene 1, AME2,
FUS3-complementing gene 1		 -0.55 0.31 -0.3
112 AT1G77700 Pathogenesis-related thaumatin superfamily protein -0.55 0.3 -0.3
113 AT2G45230 transposable element gene -0.55 0.33 -0.3
114 AT3G16680 DNA binding;DNA-directed RNA polymerases -0.55 0.29 -0.33
115 AT5G28790 transposable element gene -0.55 0.34 -0.31
116 AT4G12380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0126 Isorhamnetin-dirhamnoside - - - 0.7 0.41 -0.42
118 C0201 Phosphatidylglycerol-32:1 - Phosphatidylglycerol-32:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.57 0.33 -0.35