AT2G28840 : XB3 ortholog 1 in Arabidopsis thaliana
Query Information
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AGICode AT2G28840
Description XB3 ortholog 1 in Arabidopsis thaliana
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G28840 XB3 ortholog 1 in Arabidopsis thaliana XB3 ortholog 1 in Arabidopsis
thaliana		 1 0.3 -0.3
2 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.32 -0.32
3 AT2G46900 CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix,
Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to
2464 proteins in 333 species: Archae - 2; Bacteria - 151;
Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47;
Other Eukaryotes - 1303 (source: NCBI BLink).		 0.63 0.31 -0.31
4 AT5G58770 Undecaprenyl pyrophosphate synthetase family protein -0.63 0.32 -0.33
5 AT4G19600 Cyclin family protein CYCT1;4 0.63 0.31 -0.33
6 AT2G37410 translocase inner membrane subunit 17-2 translocase inner membrane subunit
17-2, TRANSLOCASE OF THE INNER
MEMBRANE 17, translocase inner
membrane subunit 17-2		 0.62 0.3 -0.3
7 AT1G17210 IAP-like protein 1 ARABIDOPSIS IAP-LIKE PROTEIN,
IAP-like protein 1		 0.62 0.3 -0.3
8 AT1G50700 calcium-dependent protein kinase 33 calcium-dependent protein kinase
33		 0.62 0.32 -0.32
9 AT3G29770 methyl esterase 11 ARABIDOPSIS THALIANA METHYL
ESTERASE 11, methyl esterase 11		 -0.62 0.31 -0.33
10 AT1G19040 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.61 0.31 -0.31
11 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 0.61 0.32 -0.31
12 AT2G38350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.3 -0.31
13 AT3G12110 actin-11 actin-11 -0.59 0.31 -0.32
14 AT1G75830 low-molecular-weight cysteine-rich 67 low-molecular-weight cysteine-rich
67, PLANT DEFENSIN 1.1		 0.59 0.31 -0.31
15 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 -0.58 0.3 -0.29
16 AT2G34315 Avirulence induced gene (AIG1) family protein -0.58 0.31 -0.32
17 AT2G36080 AP2/B3-like transcriptional factor family protein 0.57 0.31 -0.32
18 AT1G55330 arabinogalactan protein 21 arabinogalactan protein 21,
ARABINOGALACTAN PROTEIN 21		 -0.57 0.31 -0.28
19 AT5G20660 Zn-dependent exopeptidases superfamily protein 0.57 0.3 -0.32
20 AT1G15920 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.57 0.31 -0.29
21 AT2G42960 Protein kinase superfamily protein 0.57 0.32 -0.3
22 AT5G42760 Leucine carboxyl methyltransferase -0.57 0.33 -0.31
23 AT2G39705 ROTUNDIFOLIA like 8 DEVIL 11, ROTUNDIFOLIA like 8 0.56 0.34 -0.32
24 AT4G30360 cyclic nucleotide-gated channel 17 CYCLIC NUCLEOTIDE-GATED CHANNEL
17, cyclic nucleotide-gated
channel 17		 0.56 0.31 -0.31
25 AT4G00890 proline-rich family protein -0.56 0.32 -0.32
26 AT2G27550 centroradialis centroradialis 0.56 0.32 -0.31
27 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.33 -0.32
28 AT2G06310 transposable element gene -0.55 0.32 -0.3
29 AT5G42700 AP2/B3-like transcriptional factor family protein -0.55 0.32 -0.31
30 AT1G75720 Plant protein of unknown function (DUF827) -0.55 0.32 -0.31
31 AT3G15220 Protein kinase superfamily protein -0.55 0.31 -0.34
32 AT5G62500 end binding protein 1B ATEB1, END BINDING PROTEIN 1B, end
binding protein 1B		 -0.55 0.32 -0.32
33 AT2G46480 galacturonosyltransferase 2 galacturonosyltransferase 2,
GALACTURONOSYLTRANSFERASE 2		 -0.55 0.31 -0.31
34 AT4G14720 TIFY domain/Divergent CCT motif family protein PEAPOD 2, TIFY4B 0.55 0.31 -0.34
35 AT5G38580 FBD-like domain family protein -0.54 0.29 -0.3
36 AT1G16705 p300/CBP acetyltransferase-related protein-related -0.54 0.31 -0.31
37 AT3G19770 Vacuolar sorting protein 9 (VPS9) domain ARABIDOPSIS THALIANA VACUOLAR
PROTEIN SORTING 9A, VPS9, VPS9A		 0.54 0.31 -0.32
38 AT1G72860 Disease resistance protein (TIR-NBS-LRR class) family -0.54 0.3 -0.31
39 AT2G33830 Dormancy/auxin associated family protein 0.53 0.33 -0.32
40 AT5G22680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
F-box/RNI-like superfamily protein (TAIR:AT5G22720.2); Has
65 Blast hits to 64 proteins in 2 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.33 -0.31
41 AT5G10540 Zincin-like metalloproteases family protein 0.53 0.33 -0.3
42 AT1G31800 cytochrome P450, family 97, subfamily A, polypeptide 3 cytochrome P450, family 97,
subfamily A, polypeptide 3, LUTEIN
DEFICIENT 5		 -0.53 0.32 -0.31
43 AT5G40840 Rad21/Rec8-like family protein Sister chromatid cohesion 1 (SCC1)
protein homolog 2, SYN2		 0.53 0.32 -0.32
44 AT1G16770 unknown protein; Has 109 Blast hits to 109 proteins in 52
species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 71;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.53 0.31 -0.31
45 AT3G21000 Gag-Pol-related retrotransposon family protein -0.53 0.29 -0.31
46 AT1G10710 poor homologous synapsis 1 POOR HOMOLOGOUS SYNAPSIS 1 -0.53 0.31 -0.32
47 AT4G16566 histidine triad nucleotide-binding 4 histidine triad nucleotide-binding
4		 -0.53 0.33 -0.31
48 AT5G12480 calmodulin-domain protein kinase 7 calmodulin-domain protein kinase 7 0.52 0.3 -0.31
49 AT1G28590 GDSL-like Lipase/Acylhydrolase superfamily protein -0.52 0.3 -0.31
50 AT2G23250 UDP-glucosyl transferase 84B2 UDP-glucosyl transferase 84B2 0.52 0.29 -0.3
51 AT5G40410 Tetratricopeptide repeat (TPR)-like superfamily protein 0.52 0.31 -0.31
52 AT4G39230 NmrA-like negative transcriptional regulator family protein 0.52 0.3 -0.33
53 AT2G30460 Nucleotide/sugar transporter family protein -0.52 0.3 -0.31
54 AT5G64780 Uncharacterised conserved protein UCP009193 -0.51 0.3 -0.31
55 AT3G32917 transposable element gene -0.51 0.31 -0.31
56 AT5G51030 NAD(P)-binding Rossmann-fold superfamily protein -0.51 0.33 -0.33
57 AT1G62530 Plant protein of unknown function (DUF863) 0.51 0.31 -0.32
58 AT4G02750 Tetratricopeptide repeat (TPR)-like superfamily protein 0.51 0.34 -0.32
59 AT5G25860 F-box/RNI-like superfamily protein -0.51 0.32 -0.3
60 AT2G33260 Tryptophan/tyrosine permease -0.5 0.3 -0.3
61 AT5G63060 Sec14p-like phosphatidylinositol transfer family protein -0.5 0.32 -0.32
62 AT1G11690 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G20350.1); Has 5959 Blast hits
to 4807 proteins in 476 species: Archae - 156; Bacteria -
436; Metazoa - 2789; Fungi - 309; Plants - 336; Viruses -
9; Other Eukaryotes - 1924 (source: NCBI BLink).		 -0.49 0.31 -0.31
63 AT3G45220 Serine protease inhibitor (SERPIN) family protein -0.49 0.33 -0.28
64 AT5G09300 Thiamin diphosphate-binding fold (THDP-binding) superfamily
protein		 -0.49 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
65 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		0.59 0.43 -0.44 C0035