AT2G27710 : -
Query Information
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AGICode AT2G27710
Description 60S acidic ribosomal protein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G27710 60S acidic ribosomal protein family 1 0.3 -0.28
2 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.92 0.33 -0.31
3 AT5G61170 Ribosomal protein S19e family protein 0.92 0.33 -0.32
4 AT4G15000 Ribosomal L27e protein family 0.92 0.32 -0.32
5 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.92 0.33 -0.32
6 AT5G27770 Ribosomal L22e protein family 0.91 0.32 -0.34
7 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.91 0.32 -0.35
8 AT3G04840 Ribosomal protein S3Ae 0.91 0.3 -0.32
9 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.91 0.3 -0.33
10 AT4G16720 Ribosomal protein L23/L15e family protein 0.9 0.3 -0.34
11 AT1G67430 Ribosomal protein L22p/L17e family protein 0.9 0.31 -0.32
12 AT4G00100 ribosomal protein S13A ribosomal protein S13A, POINTED
FIRST LEAF 2, RPS13, ribosomal
protein S13A		 0.9 0.3 -0.3
13 AT2G19720 ribosomal protein S15A B ribosomal protein S15A B 0.9 0.3 -0.32
14 AT3G23390 Zinc-binding ribosomal protein family protein 0.89 0.3 -0.32
15 AT3G56340 Ribosomal protein S26e family protein 0.89 0.34 -0.3
16 AT2G36620 ribosomal protein L24 ribosomal protein L24 0.89 0.31 -0.32
17 AT1G48830 Ribosomal protein S7e family protein 0.89 0.31 -0.33
18 AT5G64140 ribosomal protein S28 ribosomal protein S28 0.89 0.31 -0.33
19 AT3G05560 Ribosomal L22e protein family 0.88 0.3 -0.32
20 AT3G47370 Ribosomal protein S10p/S20e family protein 0.88 0.29 -0.31
21 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A 0.88 0.34 -0.31
22 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.88 0.31 -0.31
23 AT2G20450 Ribosomal protein L14 0.88 0.32 -0.29
24 AT5G47700 60S acidic ribosomal protein family 0.88 0.33 -0.31
25 AT1G18540 Ribosomal protein L6 family protein 0.88 0.31 -0.31
26 AT2G19730 Ribosomal L28e protein family 0.88 0.32 -0.31
27 AT1G04480 Ribosomal protein L14p/L23e family protein 0.87 0.31 -0.32
28 AT1G34030 Ribosomal protein S13/S18 family 0.87 0.3 -0.31
29 AT2G01250 Ribosomal protein L30/L7 family protein 0.87 0.31 -0.33
30 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 0.87 0.34 -0.31
31 AT1G73230 Nascent polypeptide-associated complex NAC 0.87 0.3 -0.33
32 AT3G60770 Ribosomal protein S13/S15 0.87 0.34 -0.32
33 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 0.87 0.31 -0.31
34 AT1G29250 Alba DNA/RNA-binding protein 0.87 0.32 -0.33
35 AT3G10610 Ribosomal S17 family protein 0.87 0.29 -0.31
36 AT2G39390 Ribosomal L29 family protein 0.87 0.31 -0.31
37 AT1G14320 Ribosomal protein L16p/L10e family protein ribosomal protein L10, ribosomal
protein L10 A, SUPPRESSOR OF
ACAULIS 52		 0.86 0.28 -0.28
38 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F 0.86 0.32 -0.29
39 AT2G27720 60S acidic ribosomal protein family 0.86 0.3 -0.32
40 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.86 0.33 -0.35
41 AT5G52650 RNA binding Plectin/S10 domain-containing protein 0.86 0.31 -0.33
42 AT2G19750 Ribosomal protein S30 family protein 0.86 0.3 -0.31
43 AT5G09510 Ribosomal protein S19 family protein 0.86 0.3 -0.3
44 AT2G43460 Ribosomal L38e protein family 0.86 0.32 -0.32
45 AT3G55280 ribosomal protein L23AB RIBOSOMAL PROTEIN L23A2, ribosomal
protein L23AB		 0.86 0.32 -0.3
46 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.86 0.32 -0.32
47 AT3G09200 Ribosomal protein L10 family protein 0.86 0.3 -0.29
48 AT3G06680 Ribosomal L29e protein family 0.86 0.32 -0.3
49 AT3G02560 Ribosomal protein S7e family protein 0.86 0.31 -0.32
50 AT4G25740 RNA binding Plectin/S10 domain-containing protein 0.86 0.29 -0.31
51 AT1G04170 eukaryotic translation initiation factor 2 gamma subunit eukaryotic translation initiation
factor 2 gamma subunit		 0.86 0.31 -0.33
52 AT3G53890 Ribosomal protein S21e 0.85 0.31 -0.3
53 AT4G34555 Ribosomal protein S25 family protein 0.85 0.33 -0.32
54 AT1G26880 Ribosomal protein L34e superfamily protein 0.85 0.33 -0.31
55 AT5G61840 Exostosin family protein GUT1 0.85 0.32 -0.33
56 AT2G25210 Ribosomal protein L39 family protein 0.85 0.3 -0.34
57 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.85 0.32 -0.31
58 AT3G09500 Ribosomal L29 family protein 0.85 0.32 -0.33
59 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 0.85 0.32 -0.29
60 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.85 0.3 -0.32
61 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.85 0.32 -0.33
62 AT4G14320 Zinc-binding ribosomal protein family protein 0.85 0.31 -0.31
63 AT3G07110 Ribosomal protein L13 family protein 0.85 0.35 -0.31
64 AT4G33250 eukaryotic translation initiation factor 3K ATTIF3K1, eukaryotic translation
initiation factor 3K, TIF3K1		 0.85 0.31 -0.31
65 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.85 0.33 -0.33
66 AT4G25890 60S acidic ribosomal protein family 0.84 0.32 -0.33
67 AT1G22920 COP9 signalosome 5A ARABIDOPSIS JAB1 HOMOLOG 1, COP9
signalosome 5A, JAB1		 0.84 0.32 -0.29
68 AT4G33865 Ribosomal protein S14p/S29e family protein 0.84 0.33 -0.31
69 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.84 0.34 -0.31
70 AT5G11160 adenine phosphoribosyltransferase 5 adenine phosphoribosyltransferase
5		 0.84 0.31 -0.32
71 AT5G67510 Translation protein SH3-like family protein 0.83 0.33 -0.32
72 AT5G02870 Ribosomal protein L4/L1 family 0.83 0.31 -0.35
73 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.83 0.33 -0.32
74 AT3G02080 Ribosomal protein S19e family protein 0.83 0.32 -0.31
75 AT3G46940 DUTP-PYROPHOSPHATASE-LIKE 1 DUTP-PYROPHOSPHATASE-LIKE 1 0.83 0.31 -0.29
76 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.83 0.31 -0.33
77 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 0.83 0.32 -0.3
78 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 0.83 0.33 -0.33
79 AT4G26230 Ribosomal protein L31e family protein 0.83 0.29 -0.3
80 AT3G09630 Ribosomal protein L4/L1 family 0.83 0.31 -0.3
81 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 0.82 0.3 -0.33
82 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 0.82 0.32 -0.33
83 AT1G23290 Ribosomal protein L18e/L15 superfamily protein RIBOSOMAL PROTEIN L27A, RPL27AB 0.82 0.28 -0.3
84 AT2G18290 anaphase promoting complex 10 anaphase promoting complex 10,
EMBRYO DEFECTIVE 2783		 0.82 0.32 -0.3
85 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 0.82 0.33 -0.32
86 AT1G22930 T-complex protein 11 -0.82 0.3 -0.31
87 AT5G56670 Ribosomal protein S30 family protein 0.82 0.32 -0.32
88 AT2G21580 Ribosomal protein S25 family protein 0.82 0.33 -0.31
89 AT5G59220 highly ABA-induced PP2C gene 1 highly ABA-induced PP2C gene 1,
senescence associated gene 113		 -0.82 0.31 -0.3
90 AT5G26360 TCP-1/cpn60 chaperonin family protein 0.82 0.31 -0.32
91 AT3G13920 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation
factor 4A1, RH4, TIF4A1		 0.82 0.32 -0.33
92 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1		 0.82 0.31 -0.3
93 AT1G47200 WPP domain protein 2 WPP domain protein 2 0.82 0.34 -0.31
94 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.82 0.32 -0.3
95 AT1G22270 Trm112p-like protein 0.82 0.32 -0.3
96 AT4G00810 60S acidic ribosomal protein family 0.82 0.3 -0.28
97 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.81 0.31 -0.31
98 AT5G04430 binding to TOMV RNA 1L (long form) BINDING TO TOMV RNA 1, binding to
TOMV RNA 1L (long form), BINDING
TO TOMV RNA 1S (SHORT FORM)		 0.81 0.3 -0.3
99 AT3G43810 calmodulin 7 calmodulin 7 0.81 0.29 -0.32
100 AT2G41840 Ribosomal protein S5 family protein 0.81 0.3 -0.3
101 AT1G72770 homology to ABI1 HYPERSENSITIVE TO ABA1 -0.81 0.3 -0.31
102 AT3G55010 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast
/ phosphoribosyl-aminoimidazole synthetase / AIR synthase
(PUR5)		 ATPURM, EMBRYO DEFECTIVE 2818,
PUR5		 0.81 0.33 -0.3
103 AT5G08040 mitochondrial import receptor subunit TOM5 homolog mitochondrial import receptor
subunit TOM5 homolog		 0.81 0.31 -0.33
104 AT4G36210 Protein of unknown function (DUF726) -0.81 0.29 -0.3
105 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 0.81 0.3 -0.31
106 AT3G52940 Ergosterol biosynthesis ERG4/ERG24 family EXTRA-LONG-LIFESPAN 1, FACKEL,
HYD2		 0.81 0.34 -0.33
107 AT3G51010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.81 0.32 -0.32
108 AT5G57550 xyloglucan endotransglucosylase/hydrolase 25 xyloglucan
endotransglucosylase/hydrolase 25,
xyloglucan endotransglycosylase 3		 -0.8 0.35 -0.32
109 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 -0.8 0.33 -0.32
110 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 -0.8 0.3 -0.3
111 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 -0.8 0.33 -0.33
112 AT1G28260 Telomerase activating protein Est1 -0.79 0.31 -0.31
113 AT3G51000 alpha/beta-Hydrolases superfamily protein -0.78 0.31 -0.33
114 AT1G21410 F-box/RNI-like superfamily protein SKP2A -0.78 0.33 -0.33
115 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE		 -0.78 0.32 -0.3
116 AT2G46680 homeobox 7 homeobox 7, ARABIDOPSIS THALIANA
HOMEOBOX 7, homeobox 7		 -0.78 0.32 -0.32
117 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 -0.78 0.3 -0.33
118 AT3G11420 Protein of unknown function (DUF604) -0.78 0.31 -0.32
119 AT1G58030 cationic amino acid transporter 2 cationic amino acid transporter 2 -0.77 0.3 -0.29
120 AT1G65660 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 1 -0.77 0.3 -0.29
121 AT2G38800 Plant calmodulin-binding protein-related -0.77 0.31 -0.32
122 AT1G73980 Phosphoribulokinase / Uridine kinase family -0.76 0.3 -0.31
123 AT3G24740 Protein of unknown function (DUF1644) -0.76 0.28 -0.31
124 AT4G28570 Long-chain fatty alcohol dehydrogenase family protein -0.76 0.32 -0.32
125 AT1G32740 SBP (S-ribonuclease binding protein) family protein -0.76 0.31 -0.32
126 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.76 0.3 -0.3
127 AT1G12360 Sec1/munc18-like (SM) proteins superfamily keule -0.75 0.3 -0.3
128 AT4G02360 Protein of unknown function, DUF538 -0.75 0.29 -0.3
129 AT1G27150 Tetratricopeptide repeat (TPR)-like superfamily protein -0.75 0.32 -0.31
130 AT1G18270 ketose-bisphosphate aldolase class-II family protein -0.75 0.31 -0.31
131 AT4G17840 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Abortive infection protein (InterPro:IPR003675); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.74 0.31 -0.3
132 AT3G01100 hypothetical protein 1 ARABIDOPSIS THALIANA HYPOTHETICAL
PROTEIN 1, hypothetical protein 1		 -0.74 0.32 -0.32
133 AT5G08380 alpha-galactosidase 1 alpha-galactosidase 1,
alpha-galactosidase 1		 -0.74 0.33 -0.31
134 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 -0.74 0.32 -0.31
135 AT4G27410 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 72, RESPONSIVE TO
DESICCATION 26		 -0.74 0.32 -0.35
136 AT5G24380 YELLOW STRIPE like 2 YELLOW STRIPE LIKE 2, YELLOW
STRIPE like 2		 -0.73 0.32 -0.3
137 AT4G04960 Concanavalin A-like lectin protein kinase family protein -0.73 0.29 -0.35
138 AT2G37870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.73 0.31 -0.32
139 AT1G12050 fumarylacetoacetase, putative -0.73 0.32 -0.32
140 AT3G06500 Plant neutral invertase family protein alkaline/neutral invertase C -0.72 0.32 -0.34
141 AT3G15790 methyl-CPG-binding domain 11 ATMBD11, methyl-CPG-binding domain
11		 -0.72 0.28 -0.34
142 AT2G28400 Protein of unknown function, DUF584 -0.72 0.34 -0.3
143 AT1G30220 inositol transporter 2 ARABIDOPSIS THALIANA INOSITOL
TRANSPORTER 2, inositol
transporter 2		 -0.72 0.33 -0.34
144 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B -0.72 0.33 -0.31
145 AT3G51310 VPS35 homolog C VPS35 homolog C -0.72 0.35 -0.31
146 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.71 0.32 -0.32
147 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.71 0.34 -0.3
148 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.71 0.34 -0.31
149 AT5G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits
to 136 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.31 -0.3
150 AT5G42600 marneral synthase marneral synthase -0.7 0.3 -0.33
151 AT5G04760 Duplicated homeodomain-like superfamily protein -0.7 0.32 -0.33
152 AT3G07350 Protein of unknown function (DUF506) -0.7 0.32 -0.3
153 AT1G67310 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains		 -0.7 0.32 -0.3
154 AT5G53120 spermidine synthase 3 SPERMIDINE SYNTHASE 3, spermidine
synthase 3, SPMS		 -0.7 0.32 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
155 C0217 Putative glucosinole - - - 0.89 0.45 -0.48
156 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.79 0.34 -0.32 C0054
157 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.74 0.33 -0.3 C0260
158 C0257 Tryptophan L-Tryptophan L-Tryptophan glucosinolate biosynthesis from tryptophan,
IAA biosynthesis I,
tryptophan biosynthesis,
camalexin biosynthesis,
tRNA charging 		-0.72 0.33 -0.33 C0257