AT2G27720 : -
Query Information
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AGICode AT2G27720
Description 60S acidic ribosomal protein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G27720 60S acidic ribosomal protein family 1 0.33 -0.3
2 AT1G04480 Ribosomal protein L14p/L23e family protein 0.95 0.34 -0.31
3 AT4G16720 Ribosomal protein L23/L15e family protein 0.91 0.3 -0.33
4 AT3G02080 Ribosomal protein S19e family protein 0.91 0.32 -0.31
5 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.91 0.34 -0.31
6 AT2G19730 Ribosomal L28e protein family 0.91 0.34 -0.31
7 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 0.9 0.32 -0.32
8 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 0.9 0.3 -0.33
9 AT1G34030 Ribosomal protein S13/S18 family 0.89 0.32 -0.31
10 AT1G67430 Ribosomal protein L22p/L17e family protein 0.89 0.32 -0.3
11 AT5G27770 Ribosomal L22e protein family 0.89 0.31 -0.3
12 AT3G56340 Ribosomal protein S26e family protein 0.89 0.3 -0.32
13 AT3G60770 Ribosomal protein S13/S15 0.89 0.31 -0.32
14 AT5G47700 60S acidic ribosomal protein family 0.89 0.32 -0.32
15 AT1G48830 Ribosomal protein S7e family protein 0.89 0.34 -0.33
16 AT4G14320 Zinc-binding ribosomal protein family protein 0.89 0.32 -0.31
17 AT3G09200 Ribosomal protein L10 family protein 0.89 0.32 -0.29
18 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.89 0.31 -0.33
19 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.89 0.31 -0.31
20 AT5G23290 prefoldin 5 prefoldin 5 0.88 0.3 -0.31
21 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.88 0.28 -0.32
22 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.88 0.34 -0.31
23 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.88 0.31 -0.3
24 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.88 0.3 -0.3
25 AT3G53890 Ribosomal protein S21e 0.87 0.32 -0.31
26 AT4G25890 60S acidic ribosomal protein family 0.87 0.32 -0.29
27 AT3G05560 Ribosomal L22e protein family 0.87 0.33 -0.32
28 AT2G01250 Ribosomal protein L30/L7 family protein 0.87 0.3 -0.34
29 AT2G46230 PIN domain-like family protein 0.87 0.3 -0.29
30 AT5G61170 Ribosomal protein S19e family protein 0.87 0.32 -0.34
31 AT2G36620 ribosomal protein L24 ribosomal protein L24 0.87 0.3 -0.32
32 AT3G07110 Ribosomal protein L13 family protein 0.87 0.32 -0.33
33 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.87 0.31 -0.32
34 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.86 0.33 -0.34
35 AT2G27710 60S acidic ribosomal protein family 0.86 0.32 -0.32
36 AT3G11510 Ribosomal protein S11 family protein 0.86 0.33 -0.32
37 AT5G57290 60S acidic ribosomal protein family 0.86 0.31 -0.31
38 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.86 0.34 -0.29
39 AT1G75560 zinc knuckle (CCHC-type) family protein 0.86 0.32 -0.32
40 AT2G41840 Ribosomal protein S5 family protein 0.86 0.32 -0.3
41 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 0.86 0.3 -0.34
42 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.86 0.32 -0.34
43 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.86 0.32 -0.3
44 AT1G54690 gamma histone variant H2AX GAMMA H2AX, gamma histone variant
H2AX, H2AXB, histone H2A 3		 0.86 0.32 -0.31
45 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.86 0.33 -0.29
46 AT3G27080 translocase of outer membrane 20 kDa subunit 3 translocase of outer membrane 20
kDa subunit 3		 0.86 0.32 -0.33
47 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.86 0.33 -0.3
48 AT2G44120 Ribosomal protein L30/L7 family protein 0.85 0.33 -0.32
49 AT2G33370 Ribosomal protein L14p/L23e family protein 0.85 0.3 -0.31
50 AT1G22920 COP9 signalosome 5A ARABIDOPSIS JAB1 HOMOLOG 1, COP9
signalosome 5A, JAB1		 0.85 0.31 -0.33
51 AT3G47370 Ribosomal protein S10p/S20e family protein 0.85 0.3 -0.31
52 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 0.85 0.34 -0.31
53 AT1G73230 Nascent polypeptide-associated complex NAC 0.85 0.31 -0.31
54 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A 0.85 0.31 -0.3
55 AT2G20450 Ribosomal protein L14 0.85 0.31 -0.31
56 AT5G09510 Ribosomal protein S19 family protein 0.85 0.32 -0.3
57 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 -0.85 0.33 -0.33
58 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 0.85 0.3 -0.33
59 AT5G64140 ribosomal protein S28 ribosomal protein S28 0.85 0.32 -0.33
60 AT1G47200 WPP domain protein 2 WPP domain protein 2 0.85 0.3 -0.32
61 AT1G77750 Ribosomal protein S13/S18 family 0.85 0.33 -0.32
62 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 0.84 0.32 -0.31
63 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.84 0.31 -0.31
64 AT2G45710 Zinc-binding ribosomal protein family protein 0.84 0.31 -0.32
65 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.84 0.33 -0.3
66 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 0.84 0.29 -0.31
67 AT2G43460 Ribosomal L38e protein family 0.84 0.31 -0.31
68 AT3G02560 Ribosomal protein S7e family protein 0.84 0.33 -0.31
69 AT4G25740 RNA binding Plectin/S10 domain-containing protein 0.84 0.3 -0.33
70 AT1G03110 Transducin/WD40 repeat-like superfamily protein AtTRM82, tRNA modification 82 0.84 0.29 -0.32
71 AT3G55380 ubiquitin-conjugating enzyme 14 ubiquitin-conjugating enzyme 14 0.84 0.29 -0.3
72 AT4G29830 Transducin/WD40 repeat-like superfamily protein vernalization independence 3 0.83 0.3 -0.36
73 AT5G67510 Translation protein SH3-like family protein 0.83 0.32 -0.31
74 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.83 0.34 -0.31
75 AT3G09500 Ribosomal L29 family protein 0.83 0.31 -0.33
76 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 0.83 0.29 -0.32
77 AT3G11250 Ribosomal protein L10 family protein 0.83 0.31 -0.3
78 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 -0.83 0.28 -0.32
79 AT4G26230 Ribosomal protein L31e family protein 0.83 0.34 -0.34
80 AT3G16940 calmodulin binding;transcription regulators -0.82 0.33 -0.34
81 AT5G41970 Metal-dependent protein hydrolase 0.82 0.29 -0.32
82 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 0.82 0.31 -0.31
83 AT1G23290 Ribosomal protein L18e/L15 superfamily protein RIBOSOMAL PROTEIN L27A, RPL27AB 0.82 0.31 -0.31
84 AT4G34670 Ribosomal protein S3Ae 0.82 0.32 -0.32
85 AT3G43810 calmodulin 7 calmodulin 7 0.82 0.29 -0.32
86 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.82 0.32 -0.32
87 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 0.82 0.31 -0.32
88 AT3G10610 Ribosomal S17 family protein 0.82 0.31 -0.31
89 AT5G11160 adenine phosphoribosyltransferase 5 adenine phosphoribosyltransferase
5		 0.82 0.3 -0.33
90 AT1G22270 Trm112p-like protein 0.82 0.3 -0.32
91 AT1G04340 HR-like lesion-inducing protein-related 0.81 0.3 -0.34
92 AT5G04430 binding to TOMV RNA 1L (long form) BINDING TO TOMV RNA 1, binding to
TOMV RNA 1L (long form), BINDING
TO TOMV RNA 1S (SHORT FORM)		 0.81 0.31 -0.35
93 AT3G24740 Protein of unknown function (DUF1644) -0.81 0.3 -0.3
94 AT5G61840 Exostosin family protein GUT1 0.81 0.32 -0.31
95 AT5G52650 RNA binding Plectin/S10 domain-containing protein 0.81 0.31 -0.34
96 AT4G33865 Ribosomal protein S14p/S29e family protein 0.81 0.33 -0.32
97 AT1G01100 60S acidic ribosomal protein family 0.81 0.32 -0.31
98 AT1G22930 T-complex protein 11 -0.81 0.3 -0.31
99 AT5G25080 Sas10/Utp3/C1D family 0.81 0.34 -0.32
100 AT5G06360 Ribosomal protein S8e family protein 0.81 0.33 -0.33
101 AT1G04270 cytosolic ribosomal protein S15 cytosolic ribosomal protein S15 0.81 0.32 -0.32
102 AT1G10590 Nucleic acid-binding, OB-fold-like protein 0.81 0.3 -0.3
103 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.81 0.29 -0.3
104 AT3G06610 DNA-binding enhancer protein-related 0.81 0.33 -0.29
105 AT3G61960 Protein kinase superfamily protein -0.81 0.31 -0.33
106 AT1G73980 Phosphoribulokinase / Uridine kinase family -0.8 0.34 -0.34
107 AT1G72770 homology to ABI1 HYPERSENSITIVE TO ABA1 -0.79 0.3 -0.32
108 AT4G36210 Protein of unknown function (DUF726) -0.79 0.31 -0.29
109 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein -0.79 0.33 -0.33
110 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.78 0.33 -0.32
111 AT3G01100 hypothetical protein 1 ARABIDOPSIS THALIANA HYPOTHETICAL
PROTEIN 1, hypothetical protein 1		 -0.78 0.3 -0.31
112 AT1G03080 kinase interacting (KIP1-like) family protein -0.78 0.33 -0.31
113 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.78 0.34 -0.31
114 AT5G28520 Mannose-binding lectin superfamily protein -0.78 0.32 -0.31
115 AT2G38800 Plant calmodulin-binding protein-related -0.78 0.32 -0.3
116 AT2G36960 TSL-kinase interacting protein 1 TSL-kinase interacting protein 1 -0.76 0.32 -0.32
117 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 -0.75 0.31 -0.31
118 AT3G10550 Myotubularin-like phosphatases II superfamily Arabidopsis thaliana myotubularin
1, myotubularin 1		 -0.75 0.31 -0.33
119 AT1G02080 transcription regulators -0.75 0.3 -0.32
120 AT1G09910 Rhamnogalacturonate lyase family protein -0.75 0.31 -0.33
121 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.74 0.32 -0.33
122 AT3G62590 alpha/beta-Hydrolases superfamily protein -0.74 0.3 -0.31
123 AT1G28260 Telomerase activating protein Est1 -0.74 0.32 -0.32
124 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.73 0.33 -0.31
125 AT5G22850 Eukaryotic aspartyl protease family protein -0.73 0.34 -0.31
126 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 -0.73 0.32 -0.32
127 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H		 -0.72 0.32 -0.29
128 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B		 -0.72 0.32 -0.32
129 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.72 0.3 -0.32
130 AT5G54730 homolog of yeast autophagy 18 (ATG18) F ARABIDOPSIS THALIANA HOMOLOG OF
YEAST AUTOPHAGY 18 (ATG18) F,
homolog of yeast autophagy 18
(ATG18) F, homolog of yeast
autophagy 18 (ATG18) F		 -0.71 0.31 -0.32
131 AT1G54160 nuclear factor Y, subunit A5 nuclear factor Y, subunit A5,
NUCLEAR FACTOR Y A5		 -0.71 0.32 -0.29
132 AT5G35560 DENN (AEX-3) domain-containing protein -0.71 0.33 -0.3
133 AT2G03140 alpha/beta-Hydrolases superfamily protein -0.7 0.31 -0.34
134 AT3G22430 CONTAINS InterPro DOMAIN/s: Domain of unknown function XS
(InterPro:IPR005380); BEST Arabidopsis thaliana protein
match is: XS domain-containing protein / XS zinc finger
domain-containing protein-related (TAIR:AT5G23570.1); Has
565 Blast hits to 510 proteins in 121 species: Archae - 2;
Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51;
Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).		 -0.7 0.29 -0.31
135 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.7 0.31 -0.29
136 AT5G05570 transducin family protein / WD-40 repeat family protein -0.7 0.31 -0.32
137 AT4G23980 auxin response factor 9 auxin response factor 9 -0.7 0.31 -0.31
138 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.7 0.31 -0.34
139 AT3G15880 WUS-interacting protein 2 TOPLESS-RELATED 4, WUS-interacting
protein 2		 -0.7 0.33 -0.32
140 AT5G24350 CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39
(InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.69 0.33 -0.28
141 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein -0.69 0.31 -0.29
142 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.69 0.31 -0.29
143 AT5G50780 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 -0.68 0.31 -0.32
144 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.68 0.31 -0.32
145 AT3G02050 K+ uptake transporter 3 ARABIDOPSIS THALIANA POTASSIUM
TRANSPORTER 4, ATKUP3, K+ uptake
transporter 3		 -0.68 0.31 -0.31
146 AT2G45910 U-box domain-containing protein kinase family protein -0.68 0.32 -0.29
147 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.68 0.33 -0.34
148 AT5G50170 C2 calcium/lipid-binding and GRAM domain containing protein -0.68 0.33 -0.32
149 AT1G36510 Nucleic acid-binding proteins superfamily -0.67 0.31 -0.31
150 AT1G32750 HAC13 protein (HAC13) GTD1, HISTONE ACETYLTRANSFERASE OF
THE CBP FAMILY 13, HAF01, HISTONE
ACETYLTRANSFERASE OF THE TAFII250
FAMILY 1, TBP-ASSOCIATED FACTOR 1		 -0.67 0.34 -0.34
151 AT5G40340 Tudor/PWWP/MBT superfamily protein -0.66 0.3 -0.32
152 AT1G77800 PHD finger family protein -0.66 0.32 -0.3
153 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.66 0.32 -0.31
154 AT3G01320 SIN3-like 1 SIN3-like 1 -0.66 0.31 -0.31
155 AT4G32850 nuclear poly(a) polymerase nuclear poly(a) polymerase,
poly(A) polymerase IV		 -0.66 0.32 -0.31
156 AT4G32620 Enhancer of polycomb-like transcription factor protein -0.66 0.33 -0.33
157 AT1G17680 tetratricopeptide repeat (TPR)-containing protein -0.66 0.31 -0.28
158 AT1G24330 ARM repeat superfamily protein -0.66 0.33 -0.3
159 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 -0.66 0.32 -0.32
160 AT1G54360 TBP-ASSOCIATED FACTOR 6B TBP-ASSOCIATED FACTOR 6B,
TBP-ASSOCIATED FACTOR 6B1,
TBP-ASSOCIATED FACTOR 6B2,
TBP-associated factor 6B4		 -0.66 0.32 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
161 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		-0.81 0.43 -0.44 C0123
162 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.69 0.31 -0.31 C0260
163 C0257 Tryptophan L-Tryptophan L-Tryptophan glucosinolate biosynthesis from tryptophan,
IAA biosynthesis I,
tryptophan biosynthesis,
camalexin biosynthesis,
tRNA charging 		-0.67 0.3 -0.33 C0257