AT2G29570 : A. THALIANA PROLIFERATING CELL NUCLEAR ANTIGEN 2.....
Query Information
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AGICode AT2G29570
Description proliferating cell nuclear antigen 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G29570 proliferating cell nuclear antigen 2 A. THALIANA PROLIFERATING CELL
NUCLEAR ANTIGEN 2, proliferating
cell nuclear antigen 2		 1 0.33 -0.32
2 AT1G50010 tubulin alpha-2 chain tubulin alpha-2 chain 0.86 0.33 -0.33
3 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1		 0.86 0.31 -0.33
4 AT1G04680 Pectin lyase-like superfamily protein 0.85 0.31 -0.35
5 AT3G28900 Ribosomal protein L34e superfamily protein 0.83 0.3 -0.31
6 AT1G04820 tubulin alpha-4 chain TORTIFOLIA 2, tubulin alpha-4
chain		 0.83 0.31 -0.31
7 AT2G43100 isopropylmalate isomerase 2 ATLEUD1, isopropylmalate isomerase
2		 0.83 0.29 -0.3
8 AT4G33950 Protein kinase superfamily protein OPEN STOMATA 1, OPEN STOMATA 1,
P44, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-6,
SNF1-RELATED PROTEIN KINASE 2.6,
SRK2E		 -0.82 0.32 -0.31
9 AT4G24780 Pectin lyase-like superfamily protein 0.82 0.31 -0.32
10 AT4G34555 Ribosomal protein S25 family protein 0.82 0.3 -0.31
11 AT3G55010 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast
/ phosphoribosyl-aminoimidazole synthetase / AIR synthase
(PUR5)		 ATPURM, EMBRYO DEFECTIVE 2818,
PUR5		 0.82 0.31 -0.31
12 AT3G23805 ralf-like 24 ralf-like 24 0.82 0.31 -0.3
13 AT3G04240 Tetratricopeptide repeat (TPR)-like superfamily protein secret agent -0.82 0.28 -0.3
14 AT5G15520 Ribosomal protein S19e family protein 0.81 0.33 -0.32
15 AT3G46940 DUTP-PYROPHOSPHATASE-LIKE 1 DUTP-PYROPHOSPHATASE-LIKE 1 0.81 0.31 -0.32
16 AT5G17860 calcium exchanger 7 calcium exchanger 7 -0.81 0.33 -0.31
17 AT3G10610 Ribosomal S17 family protein 0.81 0.3 -0.33
18 AT2G35190 novel plant snare 11 ATNPSN11, novel plant snare 11,
NSPN11		 0.81 0.32 -0.33
19 AT2G42110 unknown protein; Has 27 Blast hits to 27 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.81 0.34 -0.3
20 AT4G28570 Long-chain fatty alcohol dehydrogenase family protein -0.8 0.32 -0.32
21 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 -0.8 0.31 -0.34
22 AT1G05210 Transmembrane protein 97, predicted 0.8 0.32 -0.33
23 AT1G47200 WPP domain protein 2 WPP domain protein 2 0.8 0.34 -0.31
24 AT1G74690 IQ-domain 31 IQ-domain 31 0.8 0.29 -0.32
25 AT3G23920 beta-amylase 1 beta-amylase 1, BETA-AMYLASE 7,
TR-BAMY		 -0.79 0.31 -0.32
26 AT4G18700 CBL-interacting protein kinase 12 WPL4-LIKE 4, CBL-interacting
protein kinase 12, SNF1-RELATED
PROTEIN KINASE 3.9, WPL4-LIKE 4		 -0.79 0.33 -0.31
27 AT4G34960 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.79 0.33 -0.3
28 AT1G51060 histone H2A 10 histone H2A 10 0.79 0.31 -0.33
29 AT1G54100 aldehyde dehydrogenase 7B4 aldehyde dehydrogenase 7B4 -0.79 0.3 -0.31
30 AT4G14960 Tubulin/FtsZ family protein TUA6 0.79 0.29 -0.32
31 AT2G18400 ribosomal protein L6 family protein 0.79 0.33 -0.3
32 AT1G48610 AT hook motif-containing protein 0.79 0.32 -0.31
33 AT5G27450 mevalonate kinase mevalonate kinase, MEVALONATE
KINASE		 0.79 0.29 -0.31
34 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C		 0.79 0.32 -0.32
35 AT1G79610 Na+/H+ antiporter 6 ARABIDOPSIS NA+/H+ ANTIPORTER 6,
Na+/H+ antiporter 6		 -0.79 0.32 -0.31
36 AT2G19720 ribosomal protein S15A B ribosomal protein S15A B 0.79 0.31 -0.34
37 AT4G27410 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 72, RESPONSIVE TO
DESICCATION 26		 -0.79 0.31 -0.34
38 AT5G66230 Chalcone-flavanone isomerase family protein 0.78 0.31 -0.32
39 AT1G67300 Major facilitator superfamily protein -0.78 0.3 -0.31
40 AT4G15790 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to
380 proteins in 121 species: Archae - 4; Bacteria - 107;
Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other
Eukaryotes - 127 (source: NCBI BLink).		 0.78 0.32 -0.33
41 AT3G17000 ubiquitin-conjugating enzyme 32 ubiquitin-conjugating enzyme 32 -0.78 0.32 -0.32
42 AT4G36210 Protein of unknown function (DUF726) -0.78 0.31 -0.31
43 AT1G62480 Vacuolar calcium-binding protein-related 0.78 0.32 -0.32
44 AT3G52940 Ergosterol biosynthesis ERG4/ERG24 family EXTRA-LONG-LIFESPAN 1, FACKEL,
HYD2		 0.78 0.3 -0.3
45 AT3G48020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.78 0.32 -0.33
46 AT1G80560 isopropylmalate dehydrogenase 2 ARABIDOPSIS ISOPROPYLMALATE
DEHYDROGENASE 2, isopropylmalate
dehydrogenase 2		 0.77 0.32 -0.31
47 AT1G75780 tubulin beta-1 chain tubulin beta-1 chain 0.77 0.31 -0.31
48 AT4G05400 copper ion binding 0.77 0.34 -0.31
49 AT4G08500 MAPK/ERK kinase kinase 1 ARAKIN, ATMEKK1, MAPKKK8, MAPK/ERK
kinase kinase 1		 -0.77 0.32 -0.31
50 AT3G06070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits
to 33 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.77 0.33 -0.32
51 AT4G26840 small ubiquitin-like modifier 1 ARABIDOPSIS THALIANA SMALL
UBIQUITIN-LIKE MODIFIER 1, SMALL
UBIQUITIN-LIKE MODIFIER 1, SMALL
UBIQUITIN-LIKE MODIFIER 1, small
ubiquitin-like modifier 1		 0.77 0.31 -0.31
52 AT1G17550 homology to ABI2 homology to ABI2 -0.77 0.32 -0.32
53 AT3G43810 calmodulin 7 calmodulin 7 0.77 0.31 -0.33
54 AT5G10400 Histone superfamily protein 0.77 0.32 -0.33
55 AT5G65360 Histone superfamily protein 0.77 0.32 -0.31
56 AT4G25870 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.77 0.3 -0.31
57 AT5G08380 alpha-galactosidase 1 alpha-galactosidase 1,
alpha-galactosidase 1		 -0.77 0.32 -0.3
58 AT4G19960 K+ uptake permease 9 ATKUP9, HAK9, KT9, K+ uptake
permease 9		 -0.77 0.31 -0.31
59 AT2G32380 Transmembrane protein 97, predicted 0.77 0.33 -0.32
60 AT2G04780 FASCICLIN-like arabinoogalactan 7 FASCICLIN-like arabinoogalactan 7 0.77 0.33 -0.32
61 AT2G27130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.77 0.34 -0.34
62 AT4G26080 Protein phosphatase 2C family protein ABA INSENSITIVE 1, AtABI1 -0.76 0.3 -0.31
63 AT1G73980 Phosphoribulokinase / Uridine kinase family -0.76 0.32 -0.32
64 AT2G46780 RNA-binding (RRM/RBD/RNP motifs) family protein 0.76 0.32 -0.32
65 AT4G15830 ARM repeat superfamily protein 0.76 0.33 -0.34
66 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 -0.76 0.34 -0.33
67 AT1G57620 emp24/gp25L/p24 family/GOLD family protein 0.76 0.32 -0.3
68 AT4G30130 Protein of unknown function (DUF630 and DUF632) 0.76 0.3 -0.33
69 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 -0.76 0.31 -0.33
70 AT5G65810 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 cotton Golgi-related 3 0.76 0.29 -0.31
71 AT4G15530 pyruvate orthophosphate dikinase pyruvate orthophosphate dikinase -0.76 0.3 -0.3
72 AT1G19950 HVA22-like protein H (ATHVA22H) HVA22-like protein H (ATHVA22H) 0.76 0.3 -0.32
73 AT2G42740 ribosomal protein large subunit 16A ribosomal protein large subunit
16A		 0.76 0.31 -0.28
74 AT2G04350 AMP-dependent synthetase and ligase family protein long-chain acyl-CoA synthetase 8 -0.76 0.32 -0.33
75 AT1G18270 ketose-bisphosphate aldolase class-II family protein -0.76 0.3 -0.33
76 AT1G49860 glutathione S-transferase (class phi) 14 glutathione S-transferase (class
phi) 14, glutathione S-transferase
(class phi) 14		 0.76 0.3 -0.31
77 AT5G64670 Ribosomal protein L18e/L15 superfamily protein 0.76 0.33 -0.32
78 AT3G49680 branched-chain aminotransferase 3 ATBCAT-3, branched-chain
aminotransferase 3		 0.76 0.33 -0.33
79 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.75 0.33 -0.29
80 AT4G28980 CDK-activating kinase 1AT CDK-activating kinase 1AT,
CYCLIN-DEPENDENT KINASE F;1		 0.75 0.29 -0.31
81 AT1G10780 F-box/RNI-like superfamily protein 0.75 0.32 -0.31
82 AT1G75500 Walls Are Thin 1 Walls Are Thin 1 0.75 0.29 -0.32
83 AT4G33540 metallo-beta-lactamase family protein -0.75 0.32 -0.31
84 AT3G62590 alpha/beta-Hydrolases superfamily protein -0.75 0.33 -0.33
85 AT3G10550 Myotubularin-like phosphatases II superfamily Arabidopsis thaliana myotubularin
1, myotubularin 1		 -0.75 0.3 -0.34
86 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 -0.75 0.31 -0.3
87 AT3G45230 hydroxyproline-rich glycoprotein family protein 0.75 0.31 -0.32
88 AT1G32130 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS1 (FROM
YEAST INTERACTS WITH SPT6), HIGH
NITROGEN INSENSITIVE 9, IWS1		 -0.75 0.33 -0.3
89 AT2G28400 Protein of unknown function, DUF584 -0.75 0.31 -0.29
90 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE		 -0.75 0.31 -0.31
91 AT3G03220 expansin A13 EXPANSIN 13, expansin A13, ATHEXP
ALPHA 1.22, EXP13, expansin A13		 0.75 0.33 -0.33
92 AT3G20300 Protein of unknown function (DUF3537) -0.75 0.32 -0.31
93 AT3G11420 Protein of unknown function (DUF604) -0.75 0.31 -0.32
94 AT1G28260 Telomerase activating protein Est1 -0.75 0.3 -0.33
95 AT5G18200 UTP:galactose-1-phosphate
uridylyltransferases;ribose-5-phosphate
adenylyltransferases		 -0.74 0.34 -0.31
96 AT1G48370 YELLOW STRIPE like 8 YELLOW STRIPE like 8 -0.74 0.32 -0.31
97 AT5G43380 type one serine/threonine protein phosphatase 6 type one serine/threonine protein
phosphatase 6		 -0.73 0.33 -0.31
98 AT2G22010 related to KPC1 related to KPC1 -0.73 0.31 -0.31
99 AT5G57550 xyloglucan endotransglucosylase/hydrolase 25 xyloglucan
endotransglucosylase/hydrolase 25,
xyloglucan endotransglycosylase 3		 -0.73 0.32 -0.32
100 AT5G20280 sucrose phosphate synthase 1F sucrose phosphate synthase 1F,
sucrose phosphate synthase 1F,
sucrose-phosphate synthase A1		 -0.73 0.29 -0.31
101 AT2G18170 MAP kinase 7 MAP kinase 7, MAP kinase 7 -0.73 0.33 -0.31
102 AT3G01560 Protein of unknown function (DUF1421) -0.73 0.33 -0.3
103 AT3G60140 Glycosyl hydrolase superfamily protein BETA GLUCOSIDASE 30, DARK
INDUCIBLE 2, SENESCENCE-RELATED
GENE 2		 -0.73 0.32 -0.3
104 AT4G19390 Uncharacterised protein family (UPF0114) -0.72 0.31 -0.3
105 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.72 0.3 -0.32
106 AT5G46410 SCP1-like small phosphatase 4 SCP1-like small phosphatase 4 -0.72 0.33 -0.33
107 AT1G06570 phytoene desaturation 1 4-hydroxyphenylpyruvate
dioxygenase,
4-hydroxyphenylpyruvate
dioxygenase, phytoene desaturation
1		 -0.72 0.32 -0.3
108 AT1G27200 Domain of unknown function (DUF23) -0.72 0.31 -0.31
109 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 -0.72 0.3 -0.32
110 AT1G02470 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.72 0.33 -0.3
111 AT2G30550 alpha/beta-Hydrolases superfamily protein -0.72 0.33 -0.32
112 AT5G35560 DENN (AEX-3) domain-containing protein -0.72 0.3 -0.33
113 AT1G17830 Protein of unknown function (DUF789) -0.72 0.31 -0.31
114 AT1G49670 ARP protein (REF) NQR -0.71 0.31 -0.35
115 AT1G65580 Endonuclease/exonuclease/phosphatase family protein FRAGILE FIBER3 -0.71 0.31 -0.3
116 AT3G46110 Domain of unknown function (DUF966) -0.71 0.3 -0.33
117 AT4G35790 phospholipase D delta ARABIDOPSIS THALIANA PHOSPHOLIPASE
D DELTA, phospholipase D delta		 -0.71 0.33 -0.32
118 AT4G34710 arginine decarboxylase 2 arginine decarboxylase 2, ATADC2,
SPE2		 -0.71 0.32 -0.31
119 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.71 0.31 -0.3
120 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.71 0.3 -0.31
121 AT1G12880 nudix hydrolase homolog 12 nudix hydrolase homolog 12, nudix
hydrolase homolog 12		 -0.71 0.33 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
122 C0017 sn-Glycero-3-phosphocholine sn-Glycero-3-phosphocholine L-1-Glycero-3-phosphocholine - -0.8 0.44 -0.44 C0017