AT2G27120 : POL2B
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AGICode AT2G27120
Description DNA polymerase epsilon catalytic subunit
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G27120 DNA polymerase epsilon catalytic subunit POL2B, TILTED 2 1 0.3 -0.31
2 AT2G19420 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.79 0.33 -0.31
3 AT5G08440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23490.1); Has 141 Blast
hits to 139 proteins in 35 species: Archae - 0; Bacteria -
9; Metazoa - 21; Fungi - 6; Plants - 94; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).
0.77 0.28 -0.32
4 AT2G42410 zinc finger protein 11 ZINC FINGER PROTEIN 11, zinc
finger protein 11
0.74 0.3 -0.31
5 AT5G20650 copper transporter 5 copper transporter 5 -0.74 0.3 -0.31
6 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 -0.73 0.32 -0.32
7 AT5G06140 sorting nexin 1 ARABIDOPSIS THALIANA SORTING NEXIN
1, sorting nexin 1
-0.72 0.31 -0.31
8 AT3G13430 RING/U-box superfamily protein -0.71 0.31 -0.31
9 AT3G53360 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.31 -0.33
10 AT5G22360 vesicle-associated membrane protein 714 vesicle-associated membrane
protein 714, VAMP714,
vesicle-associated membrane
protein 714
-0.7 0.29 -0.3
11 AT3G03210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 59 Blast hits to 59
proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes -
3 (source: NCBI BLink).
-0.7 0.32 -0.31
12 AT1G76660 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in
60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi -
22; Plants - 125; Viruses - 4; Other Eukaryotes - 139
(source: NCBI BLink).
-0.69 0.29 -0.31
13 AT4G14970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 6 growth stages; Has 257 Blast hits to 164 proteins
in 70 species: Archae - 0; Bacteria - 4; Metazoa - 189;
Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).
0.69 0.32 -0.3
14 AT3G57480 zinc finger (C2H2 type, AN1-like) family protein -0.69 0.34 -0.32
15 AT3G29110 Terpenoid cyclases/Protein prenyltransferases superfamily
protein
-0.69 0.31 -0.3
16 AT1G11060 WAPL (Wings apart-like protein regulation of
heterochromatin) protein
0.68 0.31 -0.32
17 AT1G62820 Calcium-binding EF-hand family protein -0.68 0.31 -0.31
18 AT3G55140 Pectin lyase-like superfamily protein -0.68 0.32 -0.32
19 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A
-0.68 0.29 -0.32
20 AT1G76920 F-box family protein -0.68 0.29 -0.3
21 AT3G20770 Ethylene insensitive 3 family protein AtEIN3, ETHYLENE-INSENSITIVE3 -0.67 0.31 -0.31
22 AT1G23910 Polyketide cyclase/dehydrase and lipid transport
superfamily protein
0.67 0.33 -0.32
23 AT3G24340 chromatin remodeling 40 chromatin remodeling 40 0.67 0.3 -0.35
24 AT3G04880 DNA-damage-repair/toleration protein (DRT102) DNA-DAMAGE-REPAIR/TOLERATION 2 -0.67 0.33 -0.32
25 AT4G39660 alanine:glyoxylate aminotransferase 2 alanine:glyoxylate
aminotransferase 2
-0.67 0.31 -0.31
26 AT1G53090 SPA1-related 4 SPA1-related 4 0.67 0.32 -0.32
27 AT2G15570 Thioredoxin superfamily protein ATHM3, Arabidopsis thioredoxin
M-type 3, GFP ARRESTED TRAFFICKING
1, THIOREDOXIN-M3
-0.67 0.3 -0.32
28 AT3G14780 CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant
(InterPro:IPR004252); BEST Arabidopsis thaliana protein
match is: glucan synthase-like 4 (TAIR:AT3G14570.2); Has
315 Blast hits to 313 proteins in 50 species: Archae - 2;
Bacteria - 16; Metazoa - 11; Fungi - 7; Plants - 181;
Viruses - 2; Other Eukaryotes - 96 (source: NCBI BLink).
-0.67 0.3 -0.32
29 AT3G27560 Protein kinase superfamily protein ATN1 -0.67 0.31 -0.3
30 AT3G02580 sterol 1 BOULE 1, DWARF 7, sterol 1 -0.67 0.31 -0.3
31 AT3G19610 Plant protein of unknown function (DUF936) -0.67 0.31 -0.29
32 AT4G21780 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
-0.67 0.32 -0.32
33 AT1G74080 myb domain protein 122 MYB DOMAIN PROTEIN 122, myb domain
protein 122
-0.66 0.31 -0.33
34 AT1G64280 regulatory protein (NPR1) ARABIDOPSIS NONEXPRESSER OF PR
GENES 1, NON-INDUCIBLE IMMUNITY 1,
NONEXPRESSER OF PR GENES 1,
SALICYLIC ACID INSENSITIVE 1
-0.66 0.31 -0.33
35 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 0.66 0.31 -0.29
36 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1
0.66 0.32 -0.32
37 AT2G21910 cytochrome P450, family 96, subfamily A, polypeptide 5 cytochrome P450, family 96,
subfamily A, polypeptide 5
-0.66 0.32 -0.32
38 AT4G27370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
MYOSIN VIII B, VIIIB 0.66 0.29 -0.31
39 AT4G36750 Quinone reductase family protein -0.65 0.31 -0.31
40 AT4G35420 dihydroflavonol 4-reductase-like1 dihydroflavonol 4-reductase-like1,
tetraketide alpha-pyrone reductase
1
0.65 0.31 -0.32
41 AT1G31600 RNA-binding (RRM/RBD/RNP motifs) family protein Arabidopsis thaliana tRNA
methyltransferase 9, tRNA
methyltransferase 9
0.65 0.33 -0.29
42 AT2G34180 CBL-interacting protein kinase 13 WPL4-LIKE 2, CBL-interacting
protein kinase 13, SNF1-RELATED
PROTEIN KINASE 3.7, WPL4-LIKE 2
-0.65 0.33 -0.3
43 AT5G65820 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.31 -0.31
44 AT2G11590 transposable element gene 0.65 0.34 -0.3
45 AT1G11280 S-locus lectin protein kinase family protein 0.65 0.3 -0.32
46 AT1G62920 CONTAINS InterPro DOMAIN/s: Proteasome maturation factor
UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana
protein match is: Proteasome maturation factor UMP1
(TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.65 0.32 -0.31
47 AT4G07790 transposable element gene -0.65 0.31 -0.33
48 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.65 0.34 -0.31
49 AT3G15040 Protein of unknown function, DUF584 -0.65 0.33 -0.3
50 AT1G07680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23903.1); Has 7 Blast
hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.65 0.31 -0.34
51 AT3G04280 response regulator 22 response regulator 22, response
regulator 22
-0.64 0.3 -0.31
52 ATMG00320 hypothetical protein ORF127 -0.64 0.32 -0.31
53 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related
0.64 0.31 -0.32
54 AT5G32440 Ubiquitin system component Cue protein -0.64 0.29 -0.31
55 AT2G46260 BTB/POZ/Kelch-associated protein -0.64 0.31 -0.33
56 AT5G54260 DNA repair and meiosis protein (Mre11) ARABIDOPSIS MEIOTIC RECOMBINATION
11, MEIOTIC RECOMBINATION 11
0.64 0.3 -0.31
57 AT4G33870 Peroxidase superfamily protein 0.64 0.31 -0.33
58 AT2G27980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain
0.64 0.3 -0.3
59 AT2G26630 transposable element gene 0.63 0.32 -0.33
60 AT3G20080 cytochrome P450, family 705, subfamily A, polypeptide 15 cytochrome P450, family 705,
subfamily A, polypeptide 15
-0.63 0.33 -0.31
61 AT1G70040 Protein of unknown function (DUF1163) -0.63 0.33 -0.31
62 AT1G50180 NB-ARC domain-containing disease resistance protein 0.63 0.32 -0.3
63 AT1G03960 Calcium-binding EF hand family protein 0.63 0.33 -0.33
64 AT1G34220 Regulator of Vps4 activity in the MVB pathway protein -0.63 0.31 -0.33
65 AT4G08930 APR-like 6 APR-like 6, APR-like 6 -0.63 0.31 -0.33
66 AT1G67770 terminal EAR1-like 2 terminal EAR1-like 2 0.63 0.34 -0.3
67 AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.63 0.3 -0.33
68 AT3G55850 Amidohydrolase family LONG AFTER FAR-RED 3, LONG AFTER
FAR-RED 3 ISOFORM 1, LAF3 ISOFORM
2
0.63 0.33 -0.32
69 AT5G41940 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.62 0.32 -0.29
70 AT4G17486 PPPDE putative thiol peptidase family protein -0.62 0.32 -0.31
71 AT1G14100 fucosyltransferase 8 fucosyltransferase 8 -0.62 0.32 -0.32
72 AT5G45640 Subtilisin-like serine endopeptidase family protein -0.62 0.32 -0.34
73 AT4G26260 myo-inositol oxygenase 4 myo-inositol oxygenase 4 -0.62 0.31 -0.33
74 AT1G26300 BSD domain-containing protein -0.62 0.33 -0.3
75 AT1G01230 ORMDL family protein -0.62 0.34 -0.32
76 AT1G16830 Pentatricopeptide repeat (PPR) superfamily protein 0.62 0.3 -0.31
77 AT4G32700 helicases;ATP-dependent helicases;nucleic acid binding;ATP
binding;DNA-directed DNA polymerases;DNA binding
TEBICHI 0.62 0.31 -0.32
78 AT3G11870 Endoribonuclease/protein kinase IRE1-like 0.62 0.32 -0.32
79 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain
(InterPro:IPR019607); Has 249 Blast hits to 219 proteins in
85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi
- 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18
(source: NCBI BLink).
0.62 0.32 -0.33
80 AT1G58330 transcription factor-related ZW2 -0.62 0.32 -0.28
81 AT5G44800 chromatin remodeling 4 chromatin remodeling 4, PICKLE
RELATED 1
0.62 0.29 -0.3
82 AT4G34320 Protein of unknown function (DUF677) 0.62 0.31 -0.32
83 AT2G42150 DNA-binding bromodomain-containing protein 0.62 0.31 -0.32
84 AT1G31040 PLATZ transcription factor family protein -0.62 0.32 -0.32
85 AT1G02130 RAS 5 RAS 5, ARABIDOPSIS RAS 5,
ARABIDOPSIS THALIANA RESPONSIVE TO
ABSCISIC ACID 1B, ARABIDOPSIS
THALIANA RAB D2A, RAS 5, RAB D2A
-0.62 0.32 -0.34
86 AT1G64930 cytochrome P450, family 87, subfamily A, polypeptide 7 cytochrome P450, family 87,
subfamily A, polypeptide 7
-0.62 0.33 -0.31
87 AT5G54220 Cysteine-rich protein 0.62 0.32 -0.32
88 AT2G19250 pseudogene, similar to Magnesium-chelatase subunit chlD,
chloroplast precursor (Mg- protoporphyrin IX chelatase)
(Mg-chelatase subunit D). (Common tobacco), similar to
SP|O24133 Magnesium-chelatase subunit chlD, chloroplast
precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase
subunit D) {Nicotiana tabacum}; blastp match of 78%
identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC
Magnesium-chelatase subunit chlD, chloroplast precursor
(Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D).
(Common tobacco) {Nicotiana tabacum}
0.62 0.29 -0.33
89 AT3G18170 Glycosyltransferase family 61 protein -0.62 0.32 -0.3
90 AT1G31630 AGAMOUS-like 86 AGAMOUS-like 86 -0.62 0.32 -0.33
91 AT4G18850 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.61 0.34 -0.3
92 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein 0.61 0.31 -0.31
93 AT4G22680 myb domain protein 85 myb domain protein 85, myb domain
protein 85
0.61 0.32 -0.32
94 AT3G06230 MAP kinase kinase 8 MAP kinase kinase 8, MAP kinase
kinase 8
0.61 0.3 -0.34
95 AT2G47560 RING/U-box superfamily protein -0.61 0.33 -0.32
96 AT1G20150 Subtilisin-like serine endopeptidase family protein 0.61 0.3 -0.3
97 AT2G15325 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
-0.61 0.32 -0.32
98 AT4G33370 DEA(D/H)-box RNA helicase family protein -0.61 0.31 -0.31
99 AT4G30570 Glucose-1-phosphate adenylyltransferase family protein 0.61 0.31 -0.32
100 AT4G15890 binding 0.61 0.32 -0.31
101 AT4G10270 Wound-responsive family protein -0.61 0.33 -0.33
102 AT2G33230 YUCCA 7 YUCCA 7 -0.61 0.31 -0.32
103 AT3G11980 Jojoba acyl CoA reductase-related male sterility protein FATTY ACID REDUCTASE 2, MALE
STERILITY 2
0.61 0.32 -0.31
104 AT3G12150 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2048 (InterPro:IPR019149); Has 421
Blast hits to 334 proteins in 155 species: Archae - 2;
Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43;
Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
-0.61 0.32 -0.3
105 AT5G17480 pollen calcium-binding protein 1 pollen calcium-binding protein 1,
pollen calcium-binding protein 1
-0.6 0.31 -0.32
106 AT5G59190 subtilase family protein 0.6 0.35 -0.33
107 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
0.6 0.33 -0.33
108 AT2G10660 transposable element gene 0.6 0.34 -0.33
109 AT2G27470 nuclear factor Y, subunit B11 nuclear factor Y, subunit B11 0.6 0.31 -0.32
110 AT5G18120 APR-like 7 APR-like 7, APR-like 7 -0.6 0.31 -0.3
111 AT3G04900 Heavy metal transport/detoxification superfamily protein -0.6 0.34 -0.31
112 AT2G32710 Cyclin-dependent kinase inhibitor family protein CYCLIN-DEPENDENT KINASE INHIBITOR
2, INTERACTORS OF CDC2 KINASE 7,
KRP4, KIP-RELATED PROTEIN 4
-0.6 0.3 -0.31
113 AT5G49750 Leucine-rich repeat (LRR) family protein -0.6 0.31 -0.34
114 AT4G14530 BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97
(TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.6 0.32 -0.33
115 AT4G16400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13175.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
-0.6 0.32 -0.32
116 AT2G23740 nucleic acid binding;sequence-specific DNA binding
transcription factors;zinc ion binding
0.6 0.33 -0.31
117 AT2G19180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits
to 64 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.6 0.33 -0.3
118 AT2G05930 transposable element gene -0.6 0.3 -0.32
119 AT5G55290 ATPase, V0 complex, subunit E -0.6 0.33 -0.31
120 AT3G49300 proline-rich family protein 0.6 0.3 -0.32
121 AT1G64410 transposable element gene 0.59 0.31 -0.32
122 AT5G02430 Transducin/WD40 repeat-like superfamily protein 0.59 0.31 -0.3
123 AT1G63060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, male
gametophyte, flower; EXPRESSED DURING: L mature pollen
stage, M germinated pollen stage, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.59 0.33 -0.3
124 AT5G45560 Pleckstrin homology (PH) domain-containing protein /
lipid-binding START domain-containing protein
0.59 0.31 -0.31
125 AT3G10040 sequence-specific DNA binding transcription factors -0.59 0.31 -0.32
126 AT1G68610 PLANT CADMIUM RESISTANCE 11 PLANT CADMIUM RESISTANCE 11 -0.59 0.31 -0.33
127 AT4G19470 Leucine-rich repeat (LRR) family protein 0.59 0.34 -0.29
128 AT1G17950 myb domain protein 52 MYB DOMAIN PROTEIN 52, BW52, myb
domain protein 52
0.59 0.31 -0.32
129 AT3G10620 nudix hydrolase homolog 26 nudix hydrolase homolog 26, nudix
hydrolase homolog 26
-0.59 0.31 -0.31
130 AT3G55700 UDP-Glycosyltransferase superfamily protein -0.59 0.31 -0.32
131 AT1G05670 Pentatricopeptide repeat (PPR-like) superfamily protein 0.59 0.32 -0.31
132 AT2G23310 Rer1 family protein ATRER1C1 -0.59 0.34 -0.31
133 AT3G31360 transposable element gene 0.59 0.31 -0.3
134 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11
-0.59 0.31 -0.32
135 AT1G03610 Protein of unknown function (DUF789) -0.59 0.31 -0.31
136 AT1G42420 transposable element gene -0.59 0.32 -0.33
137 AT4G00040 Chalcone and stilbene synthase family protein 0.58 0.32 -0.31
138 AT1G09320 agenet domain-containing protein 0.58 0.28 -0.3
139 AT1G74580 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.31 -0.29
140 AT2G30630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.58 0.32 -0.33
141 AT1G09700 dsRNA-binding domain-like superfamily protein DSRNA-BINDING PROTEIN 1,
HYPONASTIC LEAVES 1
0.58 0.31 -0.33
142 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3
0.58 0.34 -0.33
143 AT3G24515 ubiquitin-conjugating enzyme 37 ubiquitin-conjugating enzyme 37 0.58 0.32 -0.32
144 AT4G38340 Plant regulator RWP-RK family protein 0.58 0.3 -0.29
145 AT4G20490 transposable element gene 0.58 0.33 -0.33
146 AT5G03070 importin alpha isoform 9 importin alpha isoform 9 0.58 0.3 -0.3