AGICode | AT2G41350 |
Description | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21980.1); Has 188 Blast hits to 188 proteins in 66 species: Archae - 0; Bacteria - 12; Metazoa - 90; Fungi - 15; Plants - 54; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G41350 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21980.1); Has 188 Blast hits to 188 proteins in 66 species: Archae - 0; Bacteria - 12; Metazoa - 90; Fungi - 15; Plants - 54; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
AtAUG1, augmin 1, EMBRYO DEFECTIVE 2819 |
1 | 0.31 | -0.3 | ||
2 | AT3G25040 | endoplasmic reticulum retention defective 2B | endoplasmic reticulum retention defective 2B |
0.85 | 0.31 | -0.31 | ||
3 | AT5G47520 | RAB GTPase homolog A5A | RAB GTPase homolog A5A, RAB GTPase homolog A5A |
0.79 | 0.3 | -0.31 | ||
4 | AT1G36510 | Nucleic acid-binding proteins superfamily | -0.78 | 0.33 | -0.3 | |||
5 | AT4G22300 | carboxylesterases | SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1 |
0.77 | 0.33 | -0.31 | ||
6 | AT3G54930 | Protein phosphatase 2A regulatory B subunit family protein | 0.75 | 0.3 | -0.31 | |||
7 | AT5G24010 | Protein kinase superfamily protein | -0.75 | 0.32 | -0.3 | |||
8 | AT3G02260 | auxin transport protein (BIG) | ATTENUATED SHADE AVOIDANCE 1, BIG, CORYMBOSA1, DARK OVER-EXPRESSION OF CAB 1, LOW PHOSPHATE-RESISTANT ROOT 1, TRANSPORT INHIBITOR RESPONSE 3, UMBRELLA 1 |
-0.74 | 0.31 | -0.31 | ||
9 | AT5G37890 | Protein with RING/U-box and TRAF-like domains | 0.73 | 0.33 | -0.31 | |||
10 | AT3G44380 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
0.73 | 0.32 | -0.31 | |||
11 | ATMG00060 | NADH dehydrogenase subunit 5C | NADH DEHYDROGENASE SUBUNIT 5, NADH DEHYDROGENASE SUBUNIT 5.3, NADH dehydrogenase subunit 5C |
-0.73 | 0.32 | -0.33 | ||
12 | AT3G46030 | Histone superfamily protein | HTB11 | 0.73 | 0.31 | -0.32 | ||
13 | AT1G06760 | winged-helix DNA-binding transcription factor family protein |
0.73 | 0.31 | -0.32 | |||
14 | AT5G53800 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.73 | 0.31 | -0.31 | |||
15 | AT5G16870 | Peptidyl-tRNA hydrolase II (PTH2) family protein | 0.73 | 0.32 | -0.3 | |||
16 | AT3G14270 | phosphatidylinositol-4-phosphate 5-kinase family protein | FORMS APLOID AND BINUCLEATE CELLS 1B |
-0.72 | 0.31 | -0.33 | ||
17 | AT2G47320 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.72 | 0.32 | -0.35 | |||
18 | AT4G38600 | HEAT repeat ;HECT-domain (ubiquitin-transferase) | KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 | -0.72 | 0.31 | -0.31 | ||
19 | AT5G23550 | Got1/Sft2-like vescicle transport protein family | 0.72 | 0.3 | -0.32 | |||
20 | AT2G30620 | winged-helix DNA-binding transcription factor family protein |
0.71 | 0.3 | -0.31 | |||
21 | AT5G50000 | Protein kinase superfamily protein | 0.71 | 0.31 | -0.32 | |||
22 | AT5G15770 | glucose-6-phosphate acetyltransferase 1 | glucose-6-phosphate acetyltransferase 1, glucose-6-phosphate acetyltransferase 1 |
0.71 | 0.31 | -0.34 | ||
23 | AT1G04120 | multidrug resistance-associated protein 5 | ATP-binding cassette C5, Arabidopsis thaliana ATP-binding cassette C5, multidrug resistance-associated protein 5, MULTIDRUG RESISTANCE PROTEIN 5, multidrug resistance-associated protein 5 |
-0.71 | 0.3 | -0.31 | ||
24 | AT2G25730 | unknown protein; Has 157 Blast hits to 144 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). |
-0.71 | 0.34 | -0.31 | |||
25 | AT1G23230 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
-0.71 | 0.32 | -0.31 | |||
26 | AT5G42560 | Abscisic acid-responsive (TB2/DP1, HVA22) family protein | 0.71 | 0.32 | -0.34 | |||
27 | AT3G47380 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.7 | 0.32 | -0.34 | |||
28 | AT3G08910 | DNAJ heat shock family protein | 0.7 | 0.29 | -0.32 | |||
29 | AT2G44740 | cyclin p4;1 | cyclin p4;1 | 0.7 | 0.32 | -0.31 | ||
30 | AT1G61170 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). |
0.7 | 0.31 | -0.32 | |||
31 | AT2G42310 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits to 115 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.7 | 0.32 | -0.33 | |||
32 | AT2G20930 | SNARE-like superfamily protein | 0.7 | 0.32 | -0.3 | |||
33 | AT5G40340 | Tudor/PWWP/MBT superfamily protein | -0.69 | 0.32 | -0.31 | |||
34 | AT3G48750 | cell division control 2 | cell division control 2, CDC2A, CDC2AAT, CDK2, CDKA1, CDKA;1 |
0.69 | 0.3 | -0.33 | ||
35 | AT3G42790 | alfin-like 3 | alfin-like 3 | 0.69 | 0.29 | -0.31 | ||
36 | AT5G50170 | C2 calcium/lipid-binding and GRAM domain containing protein | -0.69 | 0.33 | -0.31 | |||
37 | AT4G01710 | ARP2/3 complex 16 kDa subunit (p16-Arc) | ARPC5, CROOKED | 0.69 | 0.31 | -0.31 | ||
38 | AT4G38680 | glycine rich protein 2 | ARABIDOPSIS THALIANA COLD SHOCK PROTEIN 2, COLD SHOCK DOMAIN PROTEIN 2, COLD SHOCK PROTEIN 2, glycine rich protein 2 |
0.69 | 0.31 | -0.33 | ||
39 | AT4G16430 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.69 | 0.31 | -0.31 | |||
40 | AT4G09550 | AtGCP3 interacting protein 1 | ARABIDOPSIS ATGCP3 INTERACTING PROTEIN 1, AtGCP3 interacting protein 1 |
0.68 | 0.32 | -0.32 | ||
41 | AT3G25260 | Major facilitator superfamily protein | -0.68 | 0.34 | -0.31 | |||
42 | AT5G19630 | alpha/beta-Hydrolases superfamily protein | 0.68 | 0.33 | -0.33 | |||
43 | AT5G59910 | Histone superfamily protein | HTB4 | 0.68 | 0.33 | -0.31 | ||
44 | AT4G32620 | Enhancer of polycomb-like transcription factor protein | -0.68 | 0.31 | -0.32 | |||
45 | AT5G19050 | alpha/beta-Hydrolases superfamily protein | 0.68 | 0.31 | -0.32 | |||
46 | AT5G06430 | Thioredoxin superfamily protein | 0.68 | 0.3 | -0.32 | |||
47 | AT2G36960 | TSL-kinase interacting protein 1 | TSL-kinase interacting protein 1 | -0.68 | 0.31 | -0.31 | ||
48 | AT2G21600 | endoplasmatic reticulum retrieval protein 1B | endoplasmatic reticulum retrieval protein 1B, endoplasmatic reticulum retrieval protein 1B |
0.68 | 0.3 | -0.31 | ||
49 | AT3G12810 | SNF2 domain-containing protein / helicase domain-containing protein |
chr13, PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SRCAP |
-0.67 | 0.34 | -0.31 | ||
50 | AT1G30540 | Actin-like ATPase superfamily protein | 0.67 | 0.33 | -0.32 | |||
51 | AT1G09230 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.67 | 0.32 | -0.31 | |||
52 | AT2G04330 | transposable element gene | -0.67 | 0.32 | -0.36 | |||
53 | AT1G05380 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
-0.67 | 0.29 | -0.33 | |||
54 | AT5G24130 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.67 | 0.33 | -0.31 | |||
55 | AT3G06660 | PAPA-1-like family protein / zinc finger (HIT type) family protein |
0.67 | 0.32 | -0.3 | |||
56 | AT1G10230 | SKP1-like 18 | SKP1-like 18, SKP1-like 18 | 0.67 | 0.31 | -0.3 | ||
57 | AT1G50720 | Stigma-specific Stig1 family protein | 0.67 | 0.32 | -0.3 | |||
58 | AT1G10720 | BSD domain-containing protein | 0.67 | 0.3 | -0.33 | |||
59 | AT1G68765 | Putative membrane lipoprotein | INFLORESCENCE DEFICIENT IN ABSCISSION |
-0.67 | 0.31 | -0.3 | ||
60 | AT1G22790 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast hits to 67 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.32 | -0.33 | |||
61 | AT2G14260 | proline iminopeptidase | proline iminopeptidase | 0.66 | 0.31 | -0.3 | ||
62 | AT4G33240 | 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases |
FORMS APLOID AND BINUCLEATE CELLS 1A |
-0.66 | 0.31 | -0.33 | ||
63 | AT3G16570 | rapid alkalinization factor 23 | ARABIDOPSIS RAPID ALKALINIZATION FACTOR 23, rapid alkalinization factor 23 |
0.66 | 0.32 | -0.32 | ||
64 | AT5G05610 | alfin-like 1 | alfin-like 1 | 0.66 | 0.32 | -0.3 | ||
65 | AT5G11700 | LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.66 | 0.33 | -0.32 | |||
66 | AT2G29560 | cytosolic enolase | cytosolic enolase | 0.66 | 0.31 | -0.32 | ||
67 | AT1G66750 | CDK-activating kinase 4 | AT;CDKD;2, CDK-activating kinase 4, CDK-ACTIVATING KINASE 4, CYCLIN-DEPENDENT KINASE D1;2, CDKD;2 |
0.66 | 0.31 | -0.34 | ||
68 | AT4G28440 | Nucleic acid-binding, OB-fold-like protein | 0.66 | 0.32 | -0.34 | |||
69 | AT1G79780 | Uncharacterised protein family (UPF0497) | -0.66 | 0.3 | -0.32 | |||
70 | AT2G04550 | indole-3-butyric acid response 5 | DUAL SPECIFICITY PROTEIN PHOSPHATASE 1E, indole-3-butyric acid response 5 |
0.66 | 0.33 | -0.31 | ||
71 | AT3G53650 | Histone superfamily protein | 0.65 | 0.32 | -0.31 | |||
72 | AT1G61810 | beta-glucosidase 45 | beta-glucosidase 45 | -0.65 | 0.31 | -0.31 | ||
73 | AT1G60010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.65 | 0.32 | -0.34 | |||
74 | AT2G47150 | NAD(P)-binding Rossmann-fold superfamily protein | -0.65 | 0.31 | -0.3 | |||
75 | AT2G15280 | Reticulon family protein | 0.65 | 0.33 | -0.31 | |||
76 | AT5G26140 | Putative lysine decarboxylase family protein | ATLOG9, LONELY GUY 9 | 0.65 | 0.31 | -0.32 | ||
77 | AT2G32980 | unknown protein; Has 158 Blast hits to 154 proteins in 73 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source: NCBI BLink). |
0.65 | 0.33 | -0.31 | |||
78 | AT5G56790 | Protein kinase superfamily protein | -0.65 | 0.31 | -0.33 | |||
79 | AT5G65520 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.65 | 0.31 | -0.3 | |||
80 | AT2G45490 | ataurora3 | ataurora3, ataurora3 | 0.64 | 0.31 | -0.3 | ||
81 | AT1G36430 | transposable element gene | 0.64 | 0.32 | -0.3 | |||
82 | AT3G22070 | proline-rich family protein | 0.64 | 0.33 | -0.3 | |||
83 | AT1G64980 | Nucleotide-diphospho-sugar transferases superfamily protein | 0.64 | 0.31 | -0.3 | |||
84 | AT4G27760 | NAD(P)-binding Rossmann-fold superfamily protein | FOREVER YOUNG, FEY3 | 0.64 | 0.32 | -0.34 | ||
85 | AT1G79950 | RAD3-like DNA-binding helicase protein | -0.64 | 0.32 | -0.32 | |||
86 | AT3G32060 | transposable element gene | 0.64 | 0.3 | -0.3 | |||
87 | AT5G10810 | enhancer of rudimentary protein, putative | ARABIDOPSIS THALIANA ENHANCER OF RUDIMENTARY HOMOLOGUE, ENHANCER OF RUDIMENTARY HOMOLOGUE |
0.64 | 0.3 | -0.33 | ||
88 | AT1G19320 | Pathogenesis-related thaumatin superfamily protein | 0.64 | 0.31 | -0.3 | |||
89 | AT2G37360 | ABC-2 type transporter family protein | ATP-binding cassette G2 | -0.64 | 0.31 | -0.31 | ||
90 | AT4G22140 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein |
EARLY BOLTING IN SHORT DAYS | 0.64 | 0.34 | -0.32 | ||
91 | AT2G07650 | transposable element gene | -0.63 | 0.31 | -0.31 | |||
92 | AT1G63280 | Serine protease inhibitor (SERPIN) family protein | -0.63 | 0.3 | -0.32 | |||
93 | AT5G12460 | Protein of unknown function (DUF604) | -0.63 | 0.32 | -0.3 | |||
94 | AT1G42460 | transposable element gene | -0.62 | 0.3 | -0.31 | |||
95 | AT4G19440 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.62 | 0.31 | -0.32 | |||
96 | AT5G42400 | SET domain protein 25 | ARABIDOPSIS TRITHORAX-RELATED7, SET domain protein 25 |
-0.62 | 0.31 | -0.3 | ||
97 | AT3G11050 | ferritin 2 | ferritin 2, ferritin 2 | -0.61 | 0.32 | -0.33 | ||
98 | AT5G58040 | homolog of yeast FIP1 [V] | homolog of yeast FIP1 [V], ATFIPS5, homolog of yeast FIP1 [V], FIPS5 |
-0.61 | 0.32 | -0.29 | ||
99 | AT3G44770 | Protein of unknown function (DUF626) | -0.61 | 0.31 | -0.32 | |||
100 | AT1G20120 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.61 | 0.3 | -0.32 | |||
101 | AT1G48090 | calcium-dependent lipid-binding family protein | -0.61 | 0.31 | -0.31 | |||
102 | AT3G43760 | transposable element gene | -0.61 | 0.3 | -0.32 | |||
103 | AT3G50370 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; Has 27734 Blast hits to 16708 proteins in 1259 species: Archae - 81; Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants - 987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI BLink). |
-0.6 | 0.32 | -0.31 | |||
104 | AT5G41330 | BTB/POZ domain with WD40/YVTN repeat-like protein | -0.6 | 0.32 | -0.31 | |||
105 | AT3G50250 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19270.1); Has 6 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.31 | -0.32 | |||
106 | AT1G48130 | 1-cysteine peroxiredoxin 1 | 1-cysteine peroxiredoxin 1, 1-cysteine peroxiredoxin 1 |
-0.6 | 0.32 | -0.3 | ||
107 | AT4G10260 | pfkB-like carbohydrate kinase family protein | -0.6 | 0.31 | -0.32 | |||
108 | AT2G25760 | Protein kinase family protein | -0.6 | 0.29 | -0.31 | |||
109 | AT5G51690 | 1-amino-cyclopropane-1-carboxylate synthase 12 | 1-amino-cyclopropane-1-carboxylate synthase 12 |
-0.6 | 0.28 | -0.32 | ||
110 | AT2G25140 | casein lytic proteinase B4 | CASEIN LYTIC PROTEINASE B-M, casein lytic proteinase B4, HEAT SHOCK PROTEIN 98.7 |
-0.6 | 0.31 | -0.32 | ||
111 | AT1G59820 | aminophospholipid ATPase 3 | aminophospholipid ATPase 3 | -0.6 | 0.31 | -0.31 | ||
112 | AT1G59650 | Protein of unknown function (DUF1336) | CW14 | -0.6 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
113 | C0258 | Tryptophan amide (NH3+) | D,L-Tryptophan amide (NH3+) | - | - | -0.81 | 0.44 | -0.43 | ||
114 | C0254 | Threonine | D,L-Threonine | L-Threonine | isoleucine biosynthesis I (from threonine), glycine biosynthesis, threonine biosynthesis from homoserine, tRNA charging |
-0.63 | 0.33 | -0.33 |