AT2G38610 : -
Query Information
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AGICode AT2G38610
Description RNA-binding KH domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G38610 RNA-binding KH domain-containing protein 1 0.31 -0.33
2 AT1G16210 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1014 (InterPro:IPR010422); Has 16107
Blast hits to 8386 proteins in 1107 species: Archae - 26;
Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants -
526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI
BLink).		 0.87 0.29 -0.3
3 AT3G17410 Protein kinase superfamily protein 0.85 0.32 -0.32
4 AT5G56170 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 LORELEI-LIKE-GPI-ANCHORED PROTEIN
1		 0.84 0.29 -0.32
5 AT5G35680 Nucleic acid-binding, OB-fold-like protein 0.83 0.32 -0.31
6 AT3G08710 thioredoxin H-type 9 thioredoxin H-type 9, thioredoxin
H-type 9, THIOREDOXIN TYPE H 9		 0.83 0.31 -0.31
7 AT5G37070 Protein of unknown function, DUF538 0.82 0.31 -0.32
8 AT2G18730 diacylglycerol kinase 3 ATDGK3, diacylglycerol kinase 3 0.82 0.31 -0.31
9 AT1G48850 chorismate synthase, putative /
5-enolpyruvylshikimate-3-phosphate phospholyase, putative		 embryo defective 1144 0.82 0.31 -0.3
10 AT4G23710 vacuolar ATP synthase subunit G2 vacuolar ATP synthase subunit G2,
VACUOLAR ATP SYNTHASE SUBUNIT G2,
VHA-G2		 0.82 0.32 -0.3
11 AT5G04170 Calcium-binding EF-hand family protein 0.81 0.31 -0.34
12 AT1G07240 UDP-glucosyl transferase 71C5 UDP-glucosyl transferase 71C5 0.81 0.3 -0.29
13 AT4G10140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF2062 (InterPro:IPR018639); BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G33490.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.81 0.32 -0.3
14 AT2G37940 Arabidopsis Inositol phosphorylceramide synthase 2 Arabidopsis Inositol
phosphorylceramide synthase 2,
enhancing RPW8-mediated HR-like
cell death 1		 0.81 0.31 -0.3
15 AT2G39770 Glucose-1-phosphate adenylyltransferase family protein CYTOKINESIS DEFECTIVE 1, EMBRYO
DEFECTIVE 101, GDP-MANNOSE
PYROPHOSPHORYLASE 1, SENSITIVE TO
OZONE 1, VITAMIN C DEFECTIVE 1		 0.81 0.3 -0.32
16 AT4G34720 ATPase, F0/V0 complex, subunit C protein ATVHA-C1, AVA-P1, VACUOLAR
H+-PUMPING ATPASE C1		 0.8 0.31 -0.34
17 AT4G32530 ATPase, F0/V0 complex, subunit C protein 0.8 0.35 -0.32
18 AT3G22845 emp24/gp25L/p24 family/GOLD family protein 0.8 0.33 -0.32
19 AT1G23220 Dynein light chain type 1 family protein 0.79 0.31 -0.31
20 AT5G35735 Auxin-responsive family protein 0.79 0.31 -0.33
21 AT1G09920 TRAF-type zinc finger-related 0.79 0.32 -0.31
22 AT4G02080 secretion-associated RAS super family 2 ASAR1, secretion-associated RAS
super family 2, ATSARA1C,
secretion-associated RAS super
family 2		 0.78 0.3 -0.3
23 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A 0.78 0.32 -0.32
24 AT5G22360 vesicle-associated membrane protein 714 vesicle-associated membrane
protein 714, VAMP714,
vesicle-associated membrane
protein 714		 0.78 0.32 -0.32
25 AT1G25370 Protein of unknown function (DUF1639) 0.78 0.31 -0.33
26 AT4G29350 profilin 2 profilin 2, PROFILIN 2, PROFILIN 2 0.78 0.32 -0.33
27 AT2G20760 Clathrin light chain protein 0.78 0.31 -0.33
28 AT4G29040 regulatory particle AAA-ATPase 2A regulatory particle AAA-ATPase 2A 0.77 0.33 -0.32
29 AT4G24990 Ubiquitin family protein ATGP4 0.77 0.32 -0.32
30 AT4G00570 NAD-dependent malic enzyme 2 NAD-dependent malic enzyme 2 0.77 0.32 -0.35
31 AT3G55950 CRINKLY4 related 3 ATCRR3, CRINKLY4 related 3 0.77 0.31 -0.33
32 AT1G64700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.77 0.31 -0.32
33 AT5G27380 glutathione synthetase 2 glutathione synthetase 2, GSHB 0.77 0.31 -0.3
34 AT1G63100 GRAS family transcription factor -0.76 0.32 -0.31
35 AT4G14800 20S proteasome beta subunit D2 20S proteasome beta subunit D2 0.76 0.32 -0.31
36 AT1G71190 senescence associated gene 18 senescence associated gene 18 0.76 0.33 -0.3
37 AT1G02000 UDP-D-glucuronate 4-epimerase 2 UDP-D-glucuronate 4-epimerase 2 0.76 0.3 -0.31
38 AT1G28280 VQ motif-containing protein 0.76 0.33 -0.3
39 AT3G13520 arabinogalactan protein 12 arabinogalactan protein 12,
ATAGP12		 0.76 0.33 -0.32
40 AT1G73030 SNF7 family protein CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1A, VPS46.2		 0.76 0.32 -0.31
41 AT3G26020 Protein phosphatase 2A regulatory B subunit family protein 0.76 0.31 -0.34
42 AT2G07490 transposable element gene -0.76 0.33 -0.32
43 AT4G32040 KNOTTED1-like homeobox gene 5 KNOTTED1-like homeobox gene 5 0.76 0.31 -0.33
44 AT3G03490 peroxin 19-1 AtPEX19-1, peroxin 19-1 0.76 0.32 -0.31
45 AT3G25070 RPM1 interacting protein 4 RPM1 interacting protein 4 0.75 0.32 -0.33
46 AT2G02860 sucrose transporter 2 ARABIDOPSIS THALIANA SUCROSE
TRANSPORTER 3, ATSUT2, SUCROSE
TRANSPORTER 3, sucrose transporter
2		 0.75 0.31 -0.31
47 AT5G61010 exocyst subunit exo70 family protein E2 exocyst subunit exo70 family
protein E2, exocyst subunit exo70
family protein E2		 0.75 0.31 -0.29
48 AT4G37120 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 2 0.75 0.33 -0.32
49 AT4G14490 SMAD/FHA domain-containing protein -0.75 0.32 -0.31
50 AT1G28600 GDSL-like Lipase/Acylhydrolase superfamily protein 0.75 0.32 -0.31
51 AT5G55930 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 1, oligopeptide
transporter 1		 0.75 0.33 -0.3
52 AT5G03340 ATPase, AAA-type, CDC48 protein 0.75 0.32 -0.32
53 AT3G04210 Disease resistance protein (TIR-NBS class) 0.75 0.33 -0.3
54 AT1G64740 alpha-1 tubulin alpha-1 tubulin 0.75 0.33 -0.31
55 AT4G00330 calmodulin-binding receptor-like cytoplasmic kinase 2 calmodulin-binding receptor-like
cytoplasmic kinase 2		 0.75 0.32 -0.31
56 AT1G12140 flavin-monooxygenase glucosinolate S-oxygenase 5 flavin-monooxygenase glucosinolate
S-oxygenase 5		 0.75 0.33 -0.31
57 AT2G19460 Protein of unknown function (DUF3511) 0.75 0.33 -0.31
58 AT1G20575 Nucleotide-diphospho-sugar transferases superfamily protein dolichol phosphate mannose
synthase 1		 0.75 0.31 -0.33
59 AT3G06760 Drought-responsive family protein 0.74 0.29 -0.33
60 AT1G74640 alpha/beta-Hydrolases superfamily protein 0.74 0.32 -0.33
61 AT2G41420 proline-rich family protein WINDHOSE 2 0.74 0.31 -0.31
62 AT2G25270 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
18 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G12400.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.74 0.31 -0.32
63 AT5G13980 Glycosyl hydrolase family 38 protein -0.74 0.31 -0.3
64 AT2G27580 A20/AN1-like zinc finger family protein 0.74 0.31 -0.32
65 AT3G19010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.74 0.32 -0.33
66 AT4G15800 ralf-like 33 ralf-like 33 0.74 0.31 -0.32
67 AT1G43640 tubby like protein 5 tubby like protein 5, tubby like
protein 5		 0.73 0.31 -0.33
68 AT3G14430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 16 Blast hits to 16 proteins
in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.73 0.31 -0.33
69 AT4G36500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G18210.1); Has 50 Blast
hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.3 -0.33
70 AT2G30990 Protein of unknown function (DUF688) 0.73 0.31 -0.31
71 AT5G20480 EF-TU receptor EF-TU receptor 0.73 0.31 -0.3
72 AT2G17280 Phosphoglycerate mutase family protein 0.73 0.33 -0.31
73 AT5G40870 uridine kinase/uracil phosphoribosyltransferase 1 uridine kinase/uracil
phosphoribosyltransferase 1,
uridine kinase/uracil
phosphoribosyltransferase 1,
URIDINE KINASE-LIKE 1		 -0.73 0.33 -0.31
74 AT1G15860 Domain of unknown function (DUF298) 0.73 0.33 -0.28
75 AT1G72820 Mitochondrial substrate carrier family protein -0.73 0.32 -0.32
76 AT5G52200 phosphoprotein phosphatase inhibitors AtI-2, inhibitor-2 0.73 0.33 -0.31
77 AT5G53650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.73 0.32 -0.31
78 AT1G69570 Dof-type zinc finger DNA-binding family protein 0.73 0.3 -0.33
79 AT2G23530 Zinc-finger domain of monoamine-oxidase A repressor R1 -0.72 0.33 -0.32
80 AT1G79460 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 ARABIDOPSIS THALIANA ENT-KAURENE
SYNTHASE, ARABIDOPSIS THALIANA
ENT-KAURENE SYNTHASE 1, GA
REQUIRING 2, KS, ENT-KAURENE
SYNTHASE 1		 -0.72 0.34 -0.32
81 AT5G56100 glycine-rich protein / oleosin -0.72 0.32 -0.33
82 AT1G21920 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.72 0.32 -0.31
83 AT3G57190 peptide chain release factor, putative peptide chain release factor 3 -0.72 0.31 -0.3
84 AT1G16070 tubby like protein 8 tubby like protein 8, tubby like
protein 8		 -0.71 0.31 -0.31
85 AT5G26850 Uncharacterized protein -0.71 0.32 -0.3
86 AT3G10740 alpha-L-arabinofuranosidase 1 ALPHA-L-ARABINOFURANOSIDASE,
ALPHA-L-ARABINOFURANOSIDASE 1,
alpha-L-arabinofuranosidase 1,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 1		 -0.7 0.33 -0.32
87 AT2G20000 CDC27 family protein CDC27b, HOBBIT -0.7 0.32 -0.31
88 AT5G44660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G20190.1); Has 944 Blast hits
to 462 proteins in 141 species: Archae - 2; Bacteria - 370;
Metazoa - 161; Fungi - 102; Plants - 64; Viruses - 6; Other
Eukaryotes - 239 (source: NCBI BLink).		 -0.7 0.31 -0.31
89 AT3G22790 Kinase interacting (KIP1-like) family protein -0.7 0.31 -0.31
90 AT5G37260 Homeodomain-like superfamily protein CIRCADIAN 1, REVEILLE 2 -0.7 0.33 -0.29
91 AT5G13000 glucan synthase-like 12 glucan synthase-like 12, callose
synthase 3, gsl12, glucan
synthase-like 12		 -0.69 0.33 -0.34
92 AT5G55300 DNA topoisomerase I alpha MGOUN 1, TOPOISOMERASE 1, DNA
topoisomerase I alpha		 -0.69 0.29 -0.3
93 AT1G11130 Leucine-rich repeat protein kinase family protein SCRAMBLED, STRUBBELIG-RECEPTOR
FAMILY 9, STRUBBELIG		 -0.69 0.32 -0.3
94 AT3G58975 pseudogene of F-box family protein -0.68 0.32 -0.32
95 AT4G25880 pumilio 6 pumilio 6, pumilio 6 -0.68 0.32 -0.3
96 AT5G03870 Glutaredoxin family protein -0.68 0.31 -0.31
97 AT2G45620 Nucleotidyltransferase family protein -0.68 0.33 -0.32
98 AT1G63640 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 -0.68 0.31 -0.3
99 AT2G03890 phosphoinositide 4-kinase gamma 7 phosphoinositide 4-kinase gamma 7,
phosphoinositide 4-kinase gamma 7,
UBIQUITIN-LIKE DOMAIN KINASE GAMMA
7		 -0.68 0.31 -0.31
100 AT2G18550 homeobox protein 21 homeobox protein 21, homeobox-2,
homeobox protein 21		 -0.67 0.31 -0.32
101 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 -0.66 0.31 -0.32
102 AT3G46580 methyl-CPG-binding domain protein 5 ATMBD5, METHYL-CPG-BINDING DOMAIN
PROTEIN 05, methyl-CPG-binding
domain protein 5		 -0.66 0.33 -0.33
103 AT1G30550 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.66 0.32 -0.32
104 AT2G35800 mitochondrial substrate carrier family protein S-adenosyl methionine
transporter-like		 -0.66 0.31 -0.31
105 AT1G10210 mitogen-activated protein kinase 1 mitogen-activated protein kinase
1, mitogen-activated protein
kinase 1		 -0.66 0.32 -0.31
106 AT5G03070 importin alpha isoform 9 importin alpha isoform 9 -0.66 0.32 -0.32
107 AT2G29300 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.3 -0.32
108 AT1G53070 Legume lectin family protein -0.65 0.33 -0.33
109 AT1G51170 Protein kinase superfamily protein -0.65 0.3 -0.32
110 AT5G51970 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.65 0.31 -0.32
111 AT4G02390 poly(ADP-ribose) polymerase poly(ADP-ribose) polymerase,
ATPARP1, POLY(ADP-RIBOSE)
POLYMERASE 1, poly(ADP-ribose)
polymerase		 -0.65 0.3 -0.3
112 AT4G05210 Trimeric LpxA-like enzymes superfamily protein AtLpxD1, lipid X D1 -0.65 0.31 -0.3
113 AT2G06410 transposable element gene -0.65 0.34 -0.31
114 AT2G33310 auxin-induced protein 13 auxin-induced protein 13 -0.64 0.33 -0.34
115 AT2G45700 sterile alpha motif (SAM) domain-containing protein -0.64 0.34 -0.3
116 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha -0.64 0.32 -0.31
117 AT4G37890 Zinc finger (C3HC4-type RING finger) family protein embryo sac development arrest 40 -0.64 0.31 -0.32
118 AT1G21210 wall associated kinase 4 wall associated kinase 4 -0.63 0.34 -0.32
119 AT1G78840 F-box/RNI-like/FBD-like domains-containing protein -0.63 0.33 -0.32
120 AT4G26700 fimbrin 1 ARABIDOPSIS THALIANA FIMBRIN 1,
fimbrin 1		 -0.63 0.32 -0.32
121 AT5G19870 Family of unknown function (DUF716) -0.63 0.34 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
122 C0263 UMP - UMP pyrimidine salvage pathway,
dolichyl-diphosphooligosaccharide biosynthesis,
lipid IVA biosynthesis,
uridine-5'-phosphate biosynthesis,
pyrimidine ribonucleotides interconversion 		-0.86 0.44 -0.43 C0263