AT2G41340 : RNA polymerase II fifth largest subunit, D
Query Information
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AGICode AT2G41340
Description RNA polymerase II fifth largest subunit, D
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G41340 RNA polymerase II fifth largest subunit, D RNA polymerase II fifth largest
subunit, D		 1 0.32 -0.34
2 AT5G03940 chloroplast signal recognition particle 54 kDa subunit 54 CHLOROPLAST PROTEIN,
chloroplast signal recognition
particle 54 kDa subunit,
FIFTY-FOUR CHLOROPLAST HOMOLOGUE,
SIGNAL RECOGNITION PARTICLE 54 KDA
SUBUNIT CHLOROPLAST PROTEIN		 0.9 0.33 -0.33
3 AT4G34090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.9 0.32 -0.32
4 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.89 0.32 -0.3
5 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.88 0.32 -0.33
6 AT2G35450 catalytics;hydrolases 0.88 0.3 -0.3
7 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.88 0.31 -0.31
8 AT5G36170 high chlorophyll fluorescent 109 ATPRFB, high chlorophyll
fluorescent 109		 0.87 0.31 -0.32
9 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.87 0.33 -0.34
10 AT2G02500 Nucleotide-diphospho-sugar transferases superfamily protein ATMEPCT, ISPD,
2-C-METHYL-D-ERYTHRITOL
4-PHOSPHATE CYTIDYLTRANSFERASE		 0.87 0.28 -0.31
11 AT4G12970 stomagen EPFL9, STOMAGEN 0.87 0.31 -0.32
12 AT1G12860 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 INDUCER OF CBF EXPRESSION 2,
SCREAM 2		 0.86 0.31 -0.31
13 AT5G19170 Protein of Unknown Function (DUF239) 0.86 0.33 -0.33
14 AT4G30620 Uncharacterised BCR, YbaB family COG0718 0.86 0.31 -0.33
15 AT5G64380 Inositol monophosphatase family protein 0.86 0.33 -0.34
16 AT1G02910 tetratricopeptide repeat (TPR)-containing protein LOW PSII ACCUMULATION1 0.85 0.35 -0.3
17 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: photosystem I P
subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291
proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa
- 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 0.85 0.32 -0.32
18 AT3G20680 Domain of unknown function (DUF1995) 0.84 0.31 -0.31
19 AT4G26555 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.84 0.3 -0.3
20 AT5G66520 Tetratricopeptide repeat (TPR)-like superfamily protein 0.84 0.33 -0.33
21 AT3G17040 high chlorophyll fluorescent 107 high chlorophyll fluorescent 107 0.84 0.3 -0.3
22 AT5G15390 tRNA/rRNA methyltransferase (SpoU) family protein 0.84 0.31 -0.33
23 AT2G44920 Tetratricopeptide repeat (TPR)-like superfamily protein 0.84 0.3 -0.32
24 AT2G48120 pale cress protein (PAC) PALE CRESS 0.84 0.33 -0.32
25 AT5G14260 Rubisco methyltransferase family protein 0.83 0.33 -0.31
26 AT1G75240 homeobox protein 33 homeobox protein 33, homeobox
protein 33, zinc-finger
homeodomain 5		 0.83 0.31 -0.32
27 AT4G03210 xyloglucan endotransglucosylase/hydrolase 9 xyloglucan
endotransglucosylase/hydrolase 9		 0.83 0.34 -0.3
28 AT5G44520 NagB/RpiA/CoA transferase-like superfamily protein 0.83 0.32 -0.31
29 AT1G30520 acyl-activating enzyme 14 acyl-activating enzyme 14 0.83 0.3 -0.31
30 AT4G23885 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.83 0.34 -0.32
31 AT3G43540 Protein of unknown function (DUF1350) 0.83 0.31 -0.3
32 AT1G44000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits
to 212 proteins in 76 species: Archae - 0; Bacteria - 96;
Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.83 0.32 -0.3
33 AT4G01800 Albino or Glassy Yellow 1 Albino or Glassy Yellow 1,
Arabidopsis thaliana chloroplast
SecA, SECA1		 0.83 0.31 -0.31
34 AT4G27440 protochlorophyllide oxidoreductase B protochlorophyllide oxidoreductase
B		 0.83 0.32 -0.29
35 AT4G04350 tRNA synthetase class I (I, L, M and V) family protein EMBRYO DEFECTIVE 2369 0.83 0.31 -0.31
36 AT4G19985 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.82 0.31 -0.31
37 AT1G32200 phospholipid/glycerol acyltransferase family protein ACYLTRANSFERASE 1, ATS1 0.82 0.34 -0.31
38 AT3G12080 GTP-binding family protein embryo defective 2738 0.82 0.33 -0.32
39 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 ADP GLUCOSE PYROPHOSPHORYLASE 2,
ADP glucose pyrophosphorylase
large subunit 1		 0.82 0.33 -0.31
40 AT5G17660 tRNA (guanine-N-7) methyltransferase 0.82 0.29 -0.31
41 AT2G36000 Mitochondrial transcription termination factor family
protein		 EMBRYO DEFECTIVE 3114 0.82 0.29 -0.32
42 AT2G31890 RAP ATRAP, RAP 0.82 0.34 -0.31
43 AT3G52780 Purple acid phosphatases superfamily protein ATPAP20, PAP20 -0.77 0.34 -0.32
44 AT3G28850 Glutaredoxin family protein -0.77 0.32 -0.3
45 AT3G47780 ABC2 homolog 6 ATP-binding cassette A7, A.
THALIANA ABC2 HOMOLOG 6, ABC2
homolog 6		 -0.76 0.3 -0.33
46 AT2G31390 pfkB-like carbohydrate kinase family protein -0.76 0.31 -0.32
47 AT5G65020 annexin 2 annexin 2 -0.74 0.33 -0.32
48 AT2G41850 polygalacturonase abscission zone A. thaliana ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2,
polygalacturonase abscission zone
A. thaliana		 -0.7 0.31 -0.31
49 AT2G23170 Auxin-responsive GH3 family protein GH3.3 -0.7 0.3 -0.32
50 AT5G06300 Putative lysine decarboxylase family protein LONELY GUY 7 -0.7 0.32 -0.33
51 AT2G30130 Lateral organ boundaries (LOB) domain family protein ASL5, LBD12, PEACOCK 1 -0.7 0.32 -0.32
52 AT1G74100 sulfotransferase 16 SULFOTRANSFERASE 16, ARABIDOPSIS
SULFOTRANSFERASE 5A, CORONATINE
INDUCED-7, sulfotransferase 16		 -0.69 0.32 -0.3
53 AT5G52510 SCARECROW-like 8 SCARECROW-like 8 -0.69 0.32 -0.28
54 AT2G43610 Chitinase family protein -0.69 0.34 -0.33
55 AT4G19460 UDP-Glycosyltransferase superfamily protein -0.68 0.3 -0.32
56 AT5G54800 glucose 6-phosphate/phosphate translocator 1 ARABIDOPSIS GLUCOSE
6-PHOSPHATE/PHOSPHATE TRANSLOCATOR
1, glucose 6-phosphate/phosphate
translocator 1		 -0.68 0.36 -0.3
57 AT5G59530 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.68 0.31 -0.31
58 AT1G11480 eukaryotic translation initiation factor-related -0.67 0.31 -0.31
59 AT5G16880 Target of Myb protein 1 -0.67 0.33 -0.31