AGICode | AT2G43260 |
Description | F-box and associated interaction domains-containing protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G43260 | F-box and associated interaction domains-containing protein | 1 | 0.31 | -0.33 | |||
2 | AT1G10430 | protein phosphatase 2A-2 | protein phosphatase 2A-2 | 0.8 | 0.29 | -0.3 | ||
3 | AT1G72340 | NagB/RpiA/CoA transferase-like superfamily protein | 0.78 | 0.33 | -0.31 | |||
4 | AT4G26430 | COP9 signalosome subunit 6B | COP9 signalosome subunit 6B | 0.75 | 0.3 | -0.32 | ||
5 | AT4G31580 | serine/arginine-rich 22 | RS-containing zinc finger protein 22, RS-containing zinc finger protein 22, RS-CONTAINING ZINC FINGER PROTEIN 22, serine/arginine-rich 22, SRZ22 |
0.75 | 0.33 | -0.31 | ||
6 | AT3G18030 | HAL3-like protein A | ATHAL3, ARABIDOPSIS THALIANA HAL3-LIKE PROTEIN A, HALOTOLERANCE DETERMINANT 3, HAL3-like protein A |
0.74 | 0.3 | -0.32 | ||
7 | AT1G75180 | Erythronate-4-phosphate dehydrogenase family protein | 0.74 | 0.33 | -0.32 | |||
8 | AT3G50110 | PTEN 3 | Arabidopsis thaliana phosphatase and TENsin homolog deleted on chromosome ten 3, PTEN 3, phosphatase and TENsin homolog deleted on chromosome ten 2B |
0.74 | 0.33 | -0.31 | ||
9 | AT5G57370 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777 (InterPro:IPR013957); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.74 | 0.31 | -0.31 | |||
10 | AT1G08780 | ABI3-interacting protein 3 | ABI3-interacting protein 3, PREFOLDIN 4 |
0.73 | 0.31 | -0.33 | ||
11 | AT5G55940 | Uncharacterised protein family (UPF0172) | embryo defective 2731 | 0.73 | 0.33 | -0.33 | ||
12 | AT4G28540 | casein kinase I-like 6 | casein kinase I-like 6, PAPK1 | 0.73 | 0.32 | -0.3 | ||
13 | AT2G10880 | transposable element gene | -0.72 | 0.29 | -0.32 | |||
14 | AT2G43770 | Transducin/WD40 repeat-like superfamily protein | 0.72 | 0.33 | -0.32 | |||
15 | AT3G46020 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.72 | 0.32 | -0.32 | |||
16 | AT1G05070 | Protein of unknown function (DUF1068) | 0.72 | 0.32 | -0.31 | |||
17 | AT2G42310 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits to 115 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.71 | 0.33 | -0.29 | |||
18 | AT2G20810 | galacturonosyltransferase 10 | galacturonosyltransferase 10, LGT4 | 0.69 | 0.32 | -0.3 | ||
19 | AT3G59810 | Small nuclear ribonucleoprotein family protein | 0.69 | 0.3 | -0.33 | |||
20 | AT2G04490 | transposable element gene | -0.68 | 0.32 | -0.31 | |||
21 | AT1G74840 | Homeodomain-like superfamily protein | 0.68 | 0.32 | -0.33 | |||
22 | AT3G56800 | calmodulin 3 | CALMODULIN 3, calmodulin 3 | 0.67 | 0.32 | -0.3 | ||
23 | AT5G14240 | Thioredoxin superfamily protein | 0.67 | 0.33 | -0.32 | |||
24 | AT1G13690 | ATPase E1 | ATPase E1 | 0.67 | 0.3 | -0.33 | ||
25 | AT1G14790 | RNA-dependent RNA polymerase 1 | ATRDRP1, RNA-dependent RNA polymerase 1 |
-0.67 | 0.32 | -0.32 | ||
26 | AT5G59460 | scarecrow-like transcription factor 11 (SCL11) | 0.67 | 0.31 | -0.32 | |||
27 | AT1G51600 | ZIM-LIKE 2 | GATA TRANSCRIPTION FACTOR 28, TIFY2A, ZIM-LIKE 2 |
0.67 | 0.3 | -0.32 | ||
28 | AT5G11360 | Interleukin-1 receptor-associated kinase 4 protein | -0.66 | 0.3 | -0.34 | |||
29 | AT1G77850 | auxin response factor 17 | auxin response factor 17 | 0.66 | 0.32 | -0.31 | ||
30 | AT3G57340 | Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) |
0.66 | 0.29 | -0.31 | |||
31 | AT1G11260 | sugar transporter 1 | SUGAR TRANSPORTER 1, sugar transporter 1 |
0.66 | 0.29 | -0.31 | ||
32 | AT3G18910 | EIN2 targeting protein2 | EIN2 targeting protein2 | 0.66 | 0.3 | -0.33 | ||
33 | AT5G02150 | Fes1C | Fes1C | 0.65 | 0.3 | -0.32 | ||
34 | AT1G65570 | Pectin lyase-like superfamily protein | 0.65 | 0.29 | -0.33 | |||
35 | AT2G36320 | A20/AN1-like zinc finger family protein | 0.65 | 0.31 | -0.31 | |||
36 | AT1G02740 | MRG family protein | 0.65 | 0.33 | -0.3 | |||
37 | AT5G41600 | VIRB2-interacting protein 3 | VIRB2-interacting protein 3, Reticulan like protein B4 |
0.65 | 0.32 | -0.32 | ||
38 | AT3G03160 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.31 | -0.34 | |||
39 | AT5G50170 | C2 calcium/lipid-binding and GRAM domain containing protein | -0.65 | 0.3 | -0.33 | |||
40 | AT5G22310 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.65 | 0.3 | -0.32 | |||
41 | AT1G66740 | ASF1 like histone chaperone | ANTI- SILENCING FUNCTION 1A, AtSP7, SGA2, SP7 |
0.65 | 0.34 | -0.31 | ||
42 | AT1G77570 | Winged helix-turn-helix transcription repressor DNA-binding | 0.65 | 0.29 | -0.31 | |||
43 | AT4G00800 | transducin family protein / WD-40 repeat family protein | SETH5 | -0.65 | 0.33 | -0.28 | ||
44 | AT3G52130 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.64 | 0.33 | -0.31 | |||
45 | AT3G17830 | Molecular chaperone Hsp40/DnaJ family protein | 0.64 | 0.29 | -0.31 | |||
46 | AT3G14670 | unknown protein; Has 70811 Blast hits to 32163 proteins in 1591 species: Archae - 181; Bacteria - 15342; Metazoa - 24728; Fungi - 6779; Plants - 2998; Viruses - 578; Other Eukaryotes - 20205 (source: NCBI BLink). |
-0.63 | 0.33 | -0.32 | |||
47 | AT3G01490 | Protein kinase superfamily protein | 0.63 | 0.32 | -0.31 | |||
48 | AT5G52460 | FBD, F-box and Leucine Rich Repeat domains containing protein |
embryo sac development arrest 41 | -0.63 | 0.3 | -0.35 | ||
49 | AT2G32710 | Cyclin-dependent kinase inhibitor family protein | CYCLIN-DEPENDENT KINASE INHIBITOR 2, INTERACTORS OF CDC2 KINASE 7, KRP4, KIP-RELATED PROTEIN 4 |
0.63 | 0.3 | -0.32 | ||
50 | AT5G12460 | Protein of unknown function (DUF604) | -0.63 | 0.3 | -0.32 | |||
51 | AT1G05720 | selenoprotein family protein | 0.63 | 0.32 | -0.3 | |||
52 | AT2G04550 | indole-3-butyric acid response 5 | DUAL SPECIFICITY PROTEIN PHOSPHATASE 1E, indole-3-butyric acid response 5 |
0.63 | 0.34 | -0.29 | ||
53 | AT5G05670 | signal recognition particle binding | 0.63 | 0.31 | -0.31 | |||
54 | AT5G05950 | maternal effect embryo arrest 60 | maternal effect embryo arrest 60 | 0.63 | 0.31 | -0.31 | ||
55 | AT1G35513 | pseudogene of isochorismate synthase-related / isochorismate mutase-related |
-0.62 | 0.3 | -0.32 | |||
56 | AT5G49290 | receptor like protein 56 | receptor like protein 56, receptor like protein 56 |
-0.61 | 0.35 | -0.32 | ||
57 | AT5G41850 | alpha/beta-Hydrolases superfamily protein | -0.61 | 0.33 | -0.3 | |||
58 | AT3G17980 | Calcium-dependent lipid-binding (CaLB domain) family protein |
Arabidopsis thaliana C2 domain, C2 domain |
-0.61 | 0.29 | -0.32 | ||
59 | AT2G15440 | Protein of unknown function (DUF579) | -0.61 | 0.31 | -0.29 | |||
60 | AT2G35050 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
-0.61 | 0.32 | -0.34 | |||
61 | AT2G48060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). |
-0.6 | 0.32 | -0.33 | |||
62 | AT5G54350 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.6 | 0.31 | -0.32 | |||
63 | AT3G22490 | Seed maturation protein | -0.6 | 0.31 | -0.3 | |||
64 | AT1G59820 | aminophospholipid ATPase 3 | aminophospholipid ATPase 3 | -0.6 | 0.31 | -0.32 | ||
65 | AT5G46400 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT PRP39-2, PRP39-2 | -0.59 | 0.31 | -0.31 | ||
66 | AT4G14180 | putative recombination initiation defect 1 | putative recombination initiation defect 1, putative recombination initiation defect 1 |
-0.59 | 0.31 | -0.3 | ||
67 | AT2G07650 | transposable element gene | -0.59 | 0.31 | -0.32 | |||
68 | AT2G17845 | NAD(P)-binding Rossmann-fold superfamily protein | -0.59 | 0.33 | -0.32 | |||
69 | AT2G01130 | DEA(D/H)-box RNA helicase family protein | -0.59 | 0.34 | -0.3 | |||
70 | AT1G09420 | glucose-6-phosphate dehydrogenase 4 | glucose-6-phosphate dehydrogenase 4 |
-0.59 | 0.34 | -0.32 | ||
71 | AT1G24735 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.59 | 0.32 | -0.33 | |||
72 | AT2G27395 | pseudogene of cysteine protease-related | -0.59 | 0.31 | -0.3 | |||
73 | AT2G29920 | unknown protein; Has 14 Blast hits to 9 proteins in 5 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.58 | 0.3 | -0.32 | |||
74 | AT4G31280 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.3 | -0.32 | |||
75 | AT1G30810 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
-0.58 | 0.32 | -0.32 | |||
76 | AT4G24950 | unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.31 | -0.33 | |||
77 | AT3G43940 | unknown protein; Has 24 Blast hits to 24 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.34 | -0.31 | |||
78 | AT3G50250 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19270.1); Has 6 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.32 | |||
79 | AT3G59270 | FBD-like domain family protein | -0.57 | 0.32 | -0.31 | |||
80 | AT4G30030 | Eukaryotic aspartyl protease family protein | -0.57 | 0.32 | -0.31 | |||
81 | AT2G22530 | Alkaline-phosphatase-like family protein | -0.57 | 0.3 | -0.32 | |||
82 | AT4G27850 | Glycine-rich protein family | -0.57 | 0.31 | -0.31 | |||
83 | AT4G03890 | transposable element gene | -0.56 | 0.3 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
84 | C0111 | Hexa-2-O-glycerol-β-galactopyranoside | Hexa-2-O-gllycerol-β-D-galactopyranoside | - | - | -0.78 | 0.48 | -0.42 | ||
85 | C0264 | Valine | D,L-Valine | L-Valine | jasmonoyl-amino acid conjugates biosynthesis I, pantothenate biosynthesis, IAA degradation V, valine degradation I, valine biosynthesis, tRNA charging, indole-3-acetyl-amino acid biosynthesis |
-0.64 | 0.3 | -0.3 | ||
86 | C0254 | Threonine | D,L-Threonine | L-Threonine | isoleucine biosynthesis I (from threonine), glycine biosynthesis, threonine biosynthesis from homoserine, tRNA charging |
-0.61 | 0.31 | -0.32 |