AT2G43080 : P4H isoform 1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G43080
Description P4H isoform 1
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G43080 P4H isoform 1 P4H isoform 1 1 0.32 -0.3
2 AT3G13910 Protein of unknown function (DUF3511) 0.86 0.32 -0.32
3 AT4G30270 xyloglucan endotransglucosylase/hydrolase 24 MERISTEM 5, meristem-5, SENESCENCE
4, xyloglucan
endotransglucosylase/hydrolase 24		 0.85 0.31 -0.32
4 AT3G12800 short-chain dehydrogenase-reductase B DECR, short-chain
dehydrogenase-reductase B		 0.84 0.31 -0.33
5 AT2G31200 actin depolymerizing factor 6 actin depolymerizing factor 6,
ATADF6		 0.84 0.34 -0.32
6 AT3G22160 VQ motif-containing protein 0.84 0.31 -0.33
7 AT1G21900 emp24/gp25L/p24 family/GOLD family protein 0.83 0.32 -0.32
8 AT1G53030 Cytochrome C oxidase copper chaperone (COX17) 0.83 0.3 -0.32
9 AT1G28440 HAESA-like 1 HAESA-like 1 -0.83 0.31 -0.31
10 AT3G12800 short-chain dehydrogenase-reductase B DECR, short-chain
dehydrogenase-reductase B		 0.83 0.3 -0.33
11 AT2G34070 TRICHOME BIREFRINGENCE-LIKE 37 TRICHOME BIREFRINGENCE-LIKE 37 0.83 0.32 -0.31
12 AT4G23010 UDP-galactose transporter 2 ATUTR2, UDP-galactose transporter
2		 0.83 0.29 -0.32
13 AT2G37110 PLAC8 family protein 0.82 0.32 -0.29
14 AT1G71100 Ribose 5-phosphate isomerase, type A protein RADIAL SWELLING 10 0.82 0.31 -0.32
15 AT3G59280 Protein Transporter, Pam16 THAXTOMIN A RESISTANT 1 0.82 0.33 -0.31
16 AT2G01420 Auxin efflux carrier family protein ARABIDOPSIS PIN-FORMED 4,
PIN-FORMED 4		 -0.81 0.31 -0.31
17 AT2G25110 stromal cell-derived factor 2-like protein precursor Arabidopsis thaliana STROMAL
CELL-DERIVED FACTOR 2-like protein
precursor, ATSDF2-LIKE, stromal
cell-derived factor 2-like protein
precursor		 0.81 0.32 -0.32
18 AT5G63680 Pyruvate kinase family protein 0.81 0.32 -0.34
19 AT1G74240 Mitochondrial substrate carrier family protein 0.81 0.33 -0.29
20 AT3G03490 peroxin 19-1 AtPEX19-1, peroxin 19-1 0.81 0.32 -0.31
21 AT1G06180 myb domain protein 13 myb domain protein 13, ATMYBLFGN,
myb domain protein 13		 0.8 0.33 -0.3
22 AT3G47810 Calcineurin-like metallo-phosphoesterase superfamily
protein		 ATVPS29, MAIGO 1, VACUOLAR PROTEIN
SORTING 29		 0.8 0.3 -0.3
23 AT3G55470 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.8 0.33 -0.32
24 AT2G15760 Protein of unknown function (DUF1645) 0.8 0.32 -0.3
25 AT1G66250 O-Glycosyl hydrolases family 17 protein -0.8 0.32 -0.32
26 AT2G21270 ubiquitin fusion degradation 1 ubiquitin fusion degradation 1 0.8 0.35 -0.32
27 AT3G53970 proteasome inhibitor-related 0.8 0.31 -0.31
28 AT3G26090 G-protein coupled receptors;GTPase activators REGULATOR OF G-PROTEIN SIGNALING
1, REGULATOR OF G-PROTEIN
SIGNALING 1		 0.8 0.31 -0.31
29 AT4G38540 FAD/NAD(P)-binding oxidoreductase family protein 0.79 0.3 -0.32
30 AT3G17840 receptor-like kinase 902 receptor-like kinase 902 -0.79 0.33 -0.29
31 AT3G02360 6-phosphogluconate dehydrogenase family protein 0.79 0.3 -0.31
32 AT5G54170 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.79 0.32 -0.31
33 AT2G31305 inhibitor-3 INHIBITOR-3 0.79 0.31 -0.32
34 AT5G67490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1674 (InterPro:IPR012875); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.79 0.3 -0.3
35 AT4G04620 Ubiquitin-like superfamily protein autophagy 8b 0.79 0.31 -0.33
36 AT5G62710 Leucine-rich repeat protein kinase family protein -0.79 0.32 -0.31
37 AT1G02220 NAC domain containing protein 3 NAC domain containing protein 3,
NAC domain containing protein 3		 0.79 0.33 -0.32
38 AT2G24230 Leucine-rich repeat protein kinase family protein -0.79 0.33 -0.31
39 AT2G36050 ovate family protein 15 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 15, ovate family protein
15		 -0.79 0.31 -0.31
40 AT5G54500 flavodoxin-like quinone reductase 1 flavodoxin-like quinone reductase
1		 0.79 0.32 -0.31
41 AT3G25610 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.79 0.32 -0.31
42 AT5G21105 Plant L-ascorbate oxidase 0.78 0.32 -0.29
43 AT3G59700 lectin-receptor kinase lectin-receptor kinase,
lectin-receptor kinase,
LECTIN-RECEPTOR KINASE 1		 0.78 0.32 -0.33
44 AT1G14330 Galactose oxidase/kelch repeat superfamily protein 0.78 0.29 -0.32
45 AT2G22480 phosphofructokinase 5 phosphofructokinase 5 0.78 0.32 -0.32
46 AT1G24350 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.78 0.31 -0.3
47 AT5G55520 CONTAINS InterPro DOMAIN/s: Kinesin-related protein
(InterPro:IPR010544); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G26660.1); Has 32425
Blast hits to 20462 proteins in 1550 species: Archae - 335;
Bacteria - 3392; Metazoa - 16996; Fungi - 2645; Plants -
1561; Viruses - 54; Other Eukaryotes - 7442 (source: NCBI
BLink).		 -0.78 0.31 -0.3
48 AT1G78430 ROP interactive partner 2 ROP interactive partner 2 -0.78 0.3 -0.3
49 AT5G16000 NSP-interacting kinase 1 NSP-interacting kinase 1 -0.78 0.31 -0.33
50 AT5G18310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48500.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.78 0.34 -0.33
51 AT1G69420 DHHC-type zinc finger family protein -0.78 0.32 -0.3
52 AT2G38040 acetyl Co-enzyme a carboxylase carboxyltransferase alpha
subunit		 acetyl Co-enzyme a carboxylase
carboxyltransferase alpha subunit		 -0.78 0.32 -0.33
53 AT5G27550 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.77 0.32 -0.33
54 AT3G61610 Galactose mutarotase-like superfamily protein -0.77 0.3 -0.31
55 AT1G66200 glutamine synthase clone F11 glutamine synthase clone F11,
glutamine synthetase 1;2,
glutamine synthase clone F11		 0.77 0.3 -0.31
56 AT4G23470 PLAC8 family protein 0.77 0.31 -0.29
57 AT1G70810 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.77 0.33 -0.32
58 AT3G23605 Ubiquitin-like superfamily protein 0.77 0.34 -0.3
59 AT5G51600 Microtubule associated protein (MAP65/ASE1) family protein ARABIDOPSIS THALIANA
MICROTUBULE-ASSOCIATED PROTEIN
65-3, MICROTUBULE-ASSOCIATED
PROTEIN 65-3, PLEIADE		 -0.77 0.31 -0.3
60 AT3G56370 Leucine-rich repeat protein kinase family protein -0.77 0.34 -0.32
61 AT1G67040 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G26910.3); Has 89 Blast hits to 84 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.77 0.31 -0.29
62 AT5G59140 BTB/POZ domain-containing protein 0.76 0.35 -0.31
63 AT5G02160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 121
Blast hits to 121 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.3 -0.31
64 AT5G61010 exocyst subunit exo70 family protein E2 exocyst subunit exo70 family
protein E2, exocyst subunit exo70
family protein E2		 0.76 0.3 -0.34
65 AT2G27450 nitrilase-like protein 1 ATNLP1, CPA, nitrilase-like
protein 1		 0.76 0.32 -0.3
66 AT4G31840 early nodulin-like protein 15 AtENODL15, early nodulin-like
protein 15		 -0.76 0.3 -0.33
67 AT4G05160 AMP-dependent synthetase and ligase family protein 0.76 0.32 -0.31
68 AT1G02170 metacaspase 1 ARABIDOPSIS THALIANA METACASPASE
1, metacaspase 1b, ARABIDOPSIS
THALIANA METACASPASE 1B, LSD ONE
LIKE 3, metacaspase 1, metacaspase
1b		 0.76 0.31 -0.32
69 AT3G60540 Preprotein translocase Sec, Sec61-beta subunit protein 0.76 0.34 -0.33
70 AT1G69880 thioredoxin H-type 8 thioredoxin H-type 8, thioredoxin
H-type 8		 0.76 0.32 -0.35
71 AT1G11600 cytochrome P450, family 77, subfamily B, polypeptide 1 cytochrome P450, family 77,
subfamily B, polypeptide 1		 -0.76 0.31 -0.31
72 AT5G40740 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.76 0.31 -0.32
73 AT1G02730 cellulose synthase-like D5 cellulose synthase-like D5,
CELLULOSE SYNTHASE LIKE D5,
cellulose synthase-like D5, SALT
OVERLY SENSITIVE 6		 -0.76 0.32 -0.31
74 AT5G26910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits
to 684 proteins in 162 species: Archae - 4; Bacteria - 497;
Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0;
Other Eukaryotes - 408 (source: NCBI BLink).		 -0.76 0.3 -0.32
75 AT5G07810 SNF2 domain-containing protein / helicase domain-containing
protein / HNH endonuclease domain-containing protein		 -0.76 0.31 -0.3
76 AT1G05000 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP1, plant and fungi
atypical dual-specificity
phosphatase 1		 0.76 0.32 -0.3
77 AT4G29360 O-Glycosyl hydrolases family 17 protein -0.76 0.33 -0.31
78 AT3G51280 Tetratricopeptide repeat (TPR)-like superfamily protein -0.76 0.3 -0.31
79 AT5G03560 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.29 -0.31
80 AT3G50685 unknown protein; Has 52 Blast hits to 46 proteins in 20
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.75 0.32 -0.32
81 AT2G01650 plant UBX domain-containing protein 2 plant UBX domain-containing
protein 2		 0.75 0.32 -0.3
82 AT3G45780 phototropin 1 JK224, NONPHOTOTROPIC HYPOCOTYL 1,
phototropin 1, ROOT PHOTOTROPISM 1		 -0.75 0.31 -0.33
83 AT3G27690 photosystem II light harvesting complex gene 2.3 LIGHT-HARVESTING CHLOROPHYLL
B-BINDING 2, photosystem II light
harvesting complex gene 2.3,
LHCB2.4		 -0.75 0.32 -0.31
84 AT1G77110 Auxin efflux carrier family protein PIN-FORMED 6 -0.75 0.31 -0.31
85 AT3G20820 Leucine-rich repeat (LRR) family protein -0.75 0.29 -0.3
86 AT2G25060 early nodulin-like protein 14 AtENODL14, early nodulin-like
protein 14		 -0.74 0.34 -0.29
87 AT2G26910 pleiotropic drug resistance 4 ATP-binding cassette G32,
PLEIOTROPIC DRUG RESISTANCE 4,
pleiotropic drug resistance 4,
PERMEABLE CUTICLE 1		 -0.74 0.32 -0.32
88 AT4G39330 cinnamyl alcohol dehydrogenase 9 ATCAD9, cinnamyl alcohol
dehydrogenase 9		 -0.74 0.31 -0.31
89 AT5G66460 Glycosyl hydrolase superfamily protein AtMAN7, endo-beta-mannase 7 -0.74 0.32 -0.3
90 AT4G28220 NAD(P)H dehydrogenase B1 NAD(P)H dehydrogenase B1 -0.74 0.33 -0.3
91 AT5G19530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ACAULIS 5 -0.74 0.32 -0.31
92 AT4G23800 HMG (high mobility group) box protein 3xHigh Mobility Group-box2 -0.74 0.3 -0.33
93 AT1G49580 Calcium-dependent protein kinase (CDPK) family protein -0.74 0.32 -0.32
94 AT5G10560 Glycosyl hydrolase family protein -0.74 0.29 -0.3
95 AT1G23790 Plant protein of unknown function (DUF936) -0.74 0.31 -0.32
96 AT3G08030 Protein of unknown function, DUF642 -0.74 0.31 -0.33
97 AT4G02800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G01970.1); Has 3209
Blast hits to 2720 proteins in 308 species: Archae - 13;
Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants - 183;
Viruses - 21; Other Eukaryotes - 1325 (source: NCBI BLink).		 -0.74 0.3 -0.32
98 AT5G11510 myb domain protein 3r-4 myb domain protein 3R4, myb domain
protein 3r-4		 -0.74 0.34 -0.33
99 AT1G64390 glycosyl hydrolase 9C2 glycosyl hydrolase 9C2, glycosyl
hydrolase 9C2		 -0.74 0.33 -0.29
100 AT3G57830 Leucine-rich repeat protein kinase family protein -0.74 0.33 -0.32
101 AT3G54890 photosystem I light harvesting complex gene 1 photosystem I light harvesting
complex gene 1		 -0.73 0.32 -0.3
102 AT5G55830 Concanavalin A-like lectin protein kinase family protein -0.73 0.31 -0.33
103 AT1G14380 IQ-domain 28 IQ-domain 28 -0.73 0.31 -0.31
104 AT3G05470 Actin-binding FH2 (formin homology 2) family protein -0.73 0.32 -0.33
105 AT1G78580 trehalose-6-phosphate synthase trehalose-6-phosphate synthase,
trehalose-6-phosphate synthase,
TREHALOSE-6-PHOSPHATE SYNTHASE 1		 -0.73 0.34 -0.3
106 AT4G34160 CYCLIN D3;1 CYCD3, CYCLIN D3;1 -0.73 0.31 -0.33
107 AT5G56580 MAP kinase kinase 6 ARABIDOPSIS NQK1, ARABIDOPSIS
THALIANA MAP KINASE KINASE 6, MAP
kinase kinase 6		 -0.73 0.31 -0.3
108 AT3G43610 Spc97 / Spc98 family of spindle pole body (SBP) component -0.73 0.33 -0.29
109 AT1G18370 ATP binding microtubule motor family protein ARABIDOPSIS NPK1-ACTIVATING
KINESIN 1, HINKEL, NPK1-ACTIVATING
KINESIN 1		 -0.73 0.31 -0.33
110 AT4G38690 PLC-like phosphodiesterases superfamily protein -0.73 0.35 -0.32
111 AT5G62550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; Has 14949 Blast hits to 9947
proteins in 971 species: Archae - 43; Bacteria - 3248;
Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55;
Other Eukaryotes - 5075 (source: NCBI BLink).		 -0.73 0.29 -0.32
112 AT3G15550 unknown protein; Has 25732 Blast hits to 16979 proteins in
961 species: Archae - 144; Bacteria - 1801; Metazoa -
12681; Fungi - 1868; Plants - 912; Viruses - 94; Other
Eukaryotes - 8232 (source: NCBI BLink).		 -0.73 0.32 -0.33
113 AT1G30600 Subtilase family protein -0.73 0.32 -0.31
114 AT2G05990 NAD(P)-binding Rossmann-fold superfamily protein ENOYL-ACP REDUCTASE 1, MOSAIC
DEATH 1		 -0.73 0.32 -0.31
115 AT3G06030 NPK1-related protein kinase 3 NPK1-related protein kinase 3,
AtANP3, MAPKKK12, NPK1-related
protein kinase 3		 -0.72 0.3 -0.33
116 AT4G33400 Vacuolar import/degradation, Vid27-related protein -0.72 0.31 -0.28
117 AT1G34355 forkhead-associated (FHA) domain-containing protein PARALLEL SPINDLE 1, PARALLEL
SPINDLE 1		 -0.72 0.32 -0.32
118 AT2G34920 RING/U-box superfamily protein embryo sac development arrest 18 -0.72 0.3 -0.32
119 AT4G24610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G65440.1); Has 820 Blast
hits to 264 proteins in 74 species: Archae - 0; Bacteria -
15; Metazoa - 77; Fungi - 83; Plants - 96; Viruses - 0;
Other Eukaryotes - 549 (source: NCBI BLink).		 -0.72 0.33 -0.31
120 AT1G03130 photosystem I subunit D-2 photosystem I subunit D-2 -0.72 0.32 -0.29
121 AT5G60150 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.72 0.32 -0.34
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
122 C0007 β-Sitosterol - Sitosterol plant sterol biosynthesis -0.83 0.41 -0.43 C0007
123 C0063 Campesterol - Campesterol brassinosteroid biosynthesis I,
brassinosteroid biosynthesis II,
plant sterol biosynthesis,
brassinosteroid biosynthesis III 		-0.73 0.47 -0.43 C0063
124 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		-0.72 0.47 -0.44 C0016