AGICode | AT2G31080 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G31080 | transposable element gene | 1 | 0.3 | -0.31 | |||
2 | AT5G35600 | histone deacetylase7 | histone deacetylase7 | 0.63 | 0.33 | -0.33 | ||
3 | AT2G22030 | Galactose oxidase/kelch repeat superfamily protein | 0.62 | 0.32 | -0.31 | |||
4 | AT5G59170 | Proline-rich extensin-like family protein | 0.61 | 0.31 | -0.31 | |||
5 | AT1G72080 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.6 | 0.31 | -0.33 | |||
6 | AT2G40300 | ferritin 4 | ferritin 4, ferritin 4 | 0.59 | 0.32 | -0.31 | ||
7 | AT1G14910 | ENTH/ANTH/VHS superfamily protein | -0.58 | 0.3 | -0.31 | |||
8 | AT4G07540 | transposable element gene | -0.57 | 0.33 | -0.33 | |||
9 | AT3G06010 | Homeotic gene regulator | ATCHR12 | -0.56 | 0.31 | -0.3 | ||
10 | AT5G46760 | Basic helix-loop-helix (bHLH) DNA-binding family protein | MYC3 | -0.56 | 0.3 | -0.33 | ||
11 | AT4G11940 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11930.1); Has 37 Blast hits to 37 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.29 | -0.33 | |||
12 | AT5G46680 | Pentatricopeptide repeat (PPR-like) superfamily protein | -0.54 | 0.3 | -0.31 | |||
13 | AT1G60090 | beta glucosidase 4 | beta glucosidase 4 | 0.53 | 0.3 | -0.3 | ||
14 | AT5G58400 | Peroxidase superfamily protein | -0.53 | 0.3 | -0.31 | |||
15 | AT3G32150 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G32190.1); Has 67 Blast hits to 67 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 11; Fungi - 7; Plants - 18; Viruses - 1; Other Eukaryotes - 12 (source: NCBI BLink). |
0.53 | 0.33 | -0.32 | |||
16 | AT1G01130 | CONTAINS InterPro DOMAIN/s: CBL-interacting protein kinase (InterPro:IPR020660), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47170.1); Has 176 Blast hits to 176 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.31 | -0.32 | |||
17 | AT1G31100 | transposable element gene | 0.53 | 0.3 | -0.32 | |||
18 | AT5G20370 | serine-rich protein-related | 0.52 | 0.32 | -0.31 | |||
19 | AT4G03800 | transposable element gene | -0.52 | 0.32 | -0.3 | |||
20 | AT3G43050 | transposable element gene | 0.52 | 0.32 | -0.31 | |||
21 | AT5G41440 | RING/U-box superfamily protein | -0.51 | 0.31 | -0.33 | |||
22 | AT1G59780 | NB-ARC domain-containing disease resistance protein | 0.51 | 0.31 | -0.33 | |||
23 | AT1G59530 | basic leucine-zipper 4 | basic leucine-zipper 4, basic leucine-zipper 4 |
0.51 | 0.32 | -0.33 | ||
24 | AT2G17940 | Plant protein of unknown function (DUF827) | -0.5 | 0.31 | -0.33 | |||
25 | AT2G28830 | PLANT U-BOX 12 | AtPUB12, PLANT U-BOX 12 | -0.5 | 0.32 | -0.3 | ||
26 | AT1G76910 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
-0.5 | 0.3 | -0.32 | |||
27 | AT3G08550 | elongation defective 1 protein / ELD1 protein | ABA INSENSITIVE 8, ELONGATION DEFECTIVE 1, KOBITO |
-0.49 | 0.33 | -0.34 | ||
28 | AT2G43590 | Chitinase family protein | -0.49 | 0.33 | -0.3 | |||
29 | AT1G72950 | Disease resistance protein (TIR-NBS class) | 0.48 | 0.31 | -0.32 | |||
30 | AT5G36190 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT5G36200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.48 | 0.31 | -0.33 | |||
31 | AT2G27700 | eukaryotic translation initiation factor 2 family protein / eIF-2 family protein |
0.48 | 0.32 | -0.32 | |||
32 | AT3G52600 | cell wall invertase 2 | cell wall invertase 2, cell wall invertase 2 |
0.48 | 0.32 | -0.31 | ||
33 | AT5G38790 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.47 | 0.32 | -0.33 | |||
34 | AT1G07550 | Leucine-rich repeat protein kinase family protein | 0.47 | 0.33 | -0.34 | |||
35 | AT3G05040 | ARM repeat superfamily protein | HASTY, HASTY 1 | -0.47 | 0.31 | -0.31 | ||
36 | AT1G32290 | unknown protein; Has 7 Blast hits to 5 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.47 | 0.31 | -0.31 | |||
37 | AT3G01250 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 50 Blast hits to 50 proteins in 23 species: Archae - 0; Bacteria - 28; Metazoa - 15; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.47 | 0.32 | -0.33 | |||
38 | AT3G44970 | Cytochrome P450 superfamily protein | 0.47 | 0.3 | -0.31 | |||
39 | AT3G11440 | myb domain protein 65 | MYB DOMAIN PROTEIN 65, myb domain protein 65 |
-0.47 | 0.31 | -0.32 | ||
40 | AT2G31850 | unknown protein; Has 18 Blast hits to 18 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 4; Plants - 3; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.46 | 0.31 | -0.33 | |||
41 | AT2G38020 | vacuoleless1 (VCL1) | EMB258, MANGLED, VACUOLELESS 1 | -0.46 | 0.32 | -0.3 | ||
42 | AT1G73610 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.46 | 0.31 | -0.32 | |||
43 | AT3G29791 | unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.45 | 0.31 | -0.32 | |||
44 | AT2G41650 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.45 | 0.31 | -0.33 | |||
45 | AT1G52390 | unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.45 | 0.31 | -0.32 | |||
46 | AT3G28360 | P-glycoprotein 16 | ATP-binding cassette B16, P-glycoprotein 16 |
-0.44 | 0.31 | -0.33 | ||
47 | AT4G39420 | unknown protein; Has 46 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.44 | 0.32 | -0.31 | |||
48 | AT1G11100 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
-0.43 | 0.31 | -0.3 | |||
49 | AT2G22050 | Galactose oxidase/kelch repeat superfamily protein | -0.43 | 0.33 | -0.33 | |||
50 | AT3G28470 | Duplicated homeodomain-like superfamily protein | MYB DOMAIN PROTEIN 35, DEFECTIVE IN MERISTEM DEVELOPMENT AND FUNCTION 1 |
-0.43 | 0.32 | -0.33 | ||
51 | AT2G05930 | transposable element gene | -0.42 | 0.33 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
52 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
-0.66 | 0.45 | -0.43 | ||
53 | C0068 | Citric acid | - | Citrate | acetyl-CoA biosynthesis (from citrate), TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), glutamine biosynthesis III, glyoxylate cycle |
-0.53 | 0.31 | -0.31 |