AT2G47640 : -
Query Information
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AGICode AT2G47640
Description Small nuclear ribonucleoprotein family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G47640 Small nuclear ribonucleoprotein family protein 1 0.3 -0.32
2 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.84 0.31 -0.3
3 AT2G46230 PIN domain-like family protein 0.83 0.33 -0.29
4 AT1G54690 gamma histone variant H2AX GAMMA H2AX, gamma histone variant
H2AX, H2AXB, histone H2A 3		 0.83 0.31 -0.33
5 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit		 0.82 0.32 -0.32
6 AT1G04340 HR-like lesion-inducing protein-related 0.81 0.31 -0.3
7 AT3G02220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2039 (InterPro:IPR019351); Has 215
Blast hits to 215 proteins in 94 species: Archae - 2;
Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.81 0.34 -0.29
8 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.31 -0.32
9 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.8 0.32 -0.31
10 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.8 0.3 -0.3
11 AT3G55380 ubiquitin-conjugating enzyme 14 ubiquitin-conjugating enzyme 14 0.8 0.3 -0.32
12 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.79 0.31 -0.31
13 AT2G36160 Ribosomal protein S11 family protein 0.79 0.32 -0.3
14 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 0.79 0.31 -0.32
15 AT5G06360 Ribosomal protein S8e family protein 0.79 0.32 -0.31
16 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.79 0.31 -0.29
17 AT5G23290 prefoldin 5 prefoldin 5 0.78 0.33 -0.31
18 AT5G03300 adenosine kinase 2 adenosine kinase 2 0.78 0.31 -0.31
19 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 0.78 0.3 -0.33
20 AT2G44510 CDK inhibitor P21 binding protein 0.78 0.3 -0.35
21 AT5G53770 Nucleotidyltransferase family protein 0.77 0.31 -0.3
22 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 0.77 0.32 -0.31
23 AT5G24840 tRNA (guanine-N-7) methyltransferase 0.76 0.32 -0.3
24 AT2G26060 Transducin/WD40 repeat-like superfamily protein embryo defective 1345 0.76 0.33 -0.35
25 AT1G10590 Nucleic acid-binding, OB-fold-like protein 0.76 0.31 -0.32
26 AT4G18040 eukaryotic translation initiation factor 4E ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITATION FACTOR 4E1,
CUCUMOVIRUS MULTIPLICATION 1,
eukaryotic translation initiation
factor 4E, eukaryotic translation
Initiation Factor 4E1		 0.76 0.3 -0.32
27 AT2G31725 Eukaryotic protein of unknown function (DUF842) 0.76 0.3 -0.31
28 AT1G09910 Rhamnogalacturonate lyase family protein -0.76 0.31 -0.32
29 AT5G45590 Ribosomal protein L35 0.75 0.31 -0.33
30 AT3G24740 Protein of unknown function (DUF1644) -0.75 0.32 -0.31
31 AT3G07590 Small nuclear ribonucleoprotein family protein 0.75 0.31 -0.34
32 AT3G05810 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: IGR protein
motif (InterPro:IPR019083); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G26800.1); Has
62 Blast hits to 62 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.32 -0.32
33 AT5G40590 Cysteine/Histidine-rich C1 domain family protein 0.75 0.31 -0.32
34 AT2G40420 Transmembrane amino acid transporter family protein -0.74 0.32 -0.3
35 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.74 0.31 -0.3
36 AT5G23300 pyrimidine d pyrimidine d 0.74 0.29 -0.31
37 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.33 -0.31
38 AT2G44820 unknown protein; Has 70 Blast hits to 70 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4;
Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 0.73 0.31 -0.32
39 AT1G54160 nuclear factor Y, subunit A5 nuclear factor Y, subunit A5,
NUCLEAR FACTOR Y A5		 -0.73 0.3 -0.31
40 AT2G07340 PREFOLDIN 1 PREFOLDIN 1 0.73 0.31 -0.3
41 AT3G02050 K+ uptake transporter 3 ARABIDOPSIS THALIANA POTASSIUM
TRANSPORTER 4, ATKUP3, K+ uptake
transporter 3		 -0.72 0.32 -0.31
42 AT3G55730 myb domain protein 109 myb domain protein 109, myb domain
protein 109		 0.72 0.31 -0.33
43 AT2G41110 calmodulin 2 ATCAL5, calmodulin 2 0.72 0.32 -0.29
44 AT3G15140 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.72 0.33 -0.29
45 AT2G37020 Translin family protein 0.72 0.31 -0.29
46 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 -0.72 0.31 -0.32
47 AT2G24970 unknown protein; Has 33 Blast hits to 33 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.72 0.31 -0.34
48 AT4G30930 Ribosomal protein L21 NUCLEAR FUSION DEFECTIVE 1 0.72 0.31 -0.32
49 AT2G03140 alpha/beta-Hydrolases superfamily protein -0.71 0.31 -0.32
50 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.71 0.29 -0.33
51 AT4G03200 catalytics -0.7 0.31 -0.32
52 AT1G72650 TRF-like 6 TRF-like 6 -0.68 0.33 -0.33
53 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.67 0.35 -0.29
54 AT2G27390 proline-rich family protein -0.66 0.32 -0.32
55 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.66 0.34 -0.31
56 AT1G48090 calcium-dependent lipid-binding family protein -0.66 0.32 -0.32
57 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.65 0.32 -0.32
58 AT3G50220 Protein of unknown function (DUF579) IRREGULAR XYLEM 15 -0.65 0.32 -0.3
59 AT5G04380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.65 0.31 -0.31
60 AT5G52880 F-box family protein -0.65 0.32 -0.33
61 AT3G03620 MATE efflux family protein -0.64 0.3 -0.31
62 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family -0.64 0.33 -0.31
63 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 -0.63 0.32 -0.31
64 AT2G33020 receptor like protein 24 receptor like protein 24, receptor
like protein 24		 -0.63 0.31 -0.33
65 AT3G08020 PHD finger family protein -0.63 0.3 -0.32
66 AT3G02500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits
to 49 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.32 -0.35
67 AT5G58160 actin binding -0.62 0.3 -0.31
68 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 -0.62 0.31 -0.32
69 AT1G63770 Peptidase M1 family protein -0.61 0.31 -0.33
70 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.61 0.31 -0.32
71 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.6 0.3 -0.33
72 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.6 0.34 -0.35
73 AT4G00550 digalactosyl diacylglycerol deficient 2 digalactosyl diacylglycerol
deficient 2		 -0.6 0.34 -0.31
74 AT5G07050 nodulin MtN21 /EamA-like transporter family protein -0.6 0.3 -0.31
75 AT3G21210 zinc ion binding -0.6 0.35 -0.33
76 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 -0.6 0.32 -0.32
77 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 -0.6 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		-0.81 0.48 -0.46 C0123
79 C0177 MST_2429.6 - - - -0.65 0.46 -0.45
80 C0096 Gluconic acid - D-Gluconate - -0.61 0.44 -0.44 C0096