AT2G47680 : -
Query Information
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AGICode AT2G47680
Description zinc finger (CCCH type) helicase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G47680 zinc finger (CCCH type) helicase family protein 1 0.3 -0.33
2 AT1G78140 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.72 0.31 -0.33
3 AT3G60810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1499 (InterPro:IPR010865); Has 444
Blast hits to 444 proteins in 143 species: Archae - 0;
Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51;
Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).		 -0.7 0.35 -0.3
4 AT2G23840 HNH endonuclease -0.68 0.32 -0.32
5 AT1G51690 protein phosphatase 2A 55 kDa regulatory subunit B alpha
isoform		 protein phosphatase 2A 55 kDa
regulatory subunit B alpha
isoform, protein phosphatase 2A 55
kDa regulatory subunit B alpha
isoform		 -0.68 0.33 -0.32
6 AT5G05930 guanylyl cyclase 1 ARABIDOPSIS GUANYLYL CYCLASE 1,
guanylyl cyclase 1		 -0.68 0.32 -0.32
7 AT5G21060 Glyceraldehyde-3-phosphate dehydrogenase-like family
protein		 -0.67 0.33 -0.33
8 AT2G30170 Protein phosphatase 2C family protein -0.67 0.29 -0.31
9 AT3G52030 F-box family protein with WD40/YVTN repeat doamin -0.66 0.31 -0.34
10 AT1G78200 Protein phosphatase 2C family protein -0.66 0.31 -0.31
11 AT2G31040 ATP synthase protein I -related -0.66 0.3 -0.34
12 AT1G64320 myosin heavy chain-related 0.66 0.31 -0.32
13 AT1G75340 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.66 0.33 -0.34
14 AT1G70610 transporter associated with antigen processing protein 1 ATP-binding cassette B26,
transporter associated with
antigen processing protein 1,
transporter associated with
antigen processing protein 1		 -0.65 0.31 -0.31
15 AT1G35900 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.31 -0.31
16 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 -0.65 0.31 -0.32
17 AT2G03880 Pentatricopeptide repeat (PPR) superfamily protein required for efficiency of
mitochondrial editing 1		 0.65 0.34 -0.31
18 AT2G17340 Uncharacterised conserved protein (UCP030210) -0.65 0.3 -0.32
19 AT3G04870 zeta-carotene desaturase PIGMENT DEFECTIVE EMBRYO 181,
SPONTANEOUS CELL DEATH 1,
zeta-carotene desaturase		 -0.65 0.31 -0.33
20 AT3G57800 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.65 0.32 -0.29
21 AT2G19330 plant intracellular ras group-related LRR 6 plant intracellular ras
group-related LRR 6		 -0.64 0.32 -0.31
22 AT3G23400 Plastid-lipid associated protein PAP / fibrillin family
protein		 fibrillin 4 -0.64 0.32 -0.33
23 AT1G09130 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.63 0.3 -0.31
24 AT5G45170 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.63 0.31 -0.29
25 AT2G17350 unknown protein; Has 119 Blast hits to 93 proteins in 40
species: Archae - 0; Bacteria - 3; Metazoa - 18; Fungi -
12; Plants - 44; Viruses - 0; Other Eukaryotes - 42
(source: NCBI BLink).		 -0.63 0.33 -0.33
26 AT1G05900 endonuclease III 2 ATNTH2, endonuclease III 2 -0.63 0.32 -0.31
27 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.62 0.32 -0.3
28 AT4G32930 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF866, eukaryotic (InterPro:IPR008584);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 -0.62 0.32 -0.32
29 AT5G40100 Disease resistance protein (TIR-NBS-LRR class) family 0.62 0.31 -0.3
30 AT5G54855 Pollen Ole e 1 allergen and extensin family protein -0.62 0.33 -0.32
31 AT1G69010 BES1-interacting Myc-like protein 2 BES1-interacting Myc-like protein
2		 -0.62 0.31 -0.31
32 AT4G09950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.31 -0.3
33 AT2G02760 ubiquiting-conjugating enzyme 2 ubiquiting-conjugating enzyme 2,
ubiquitin-conjugating enzyme 2,
ubiquiting-conjugating enzyme 2		 -0.61 0.31 -0.32
34 AT1G76930 extensin 4 EXTENSIN 1, extensin 4, extensin
1, extensin 4, OBP3-RESPONSIVE
GENE 5		 0.61 0.32 -0.3
35 AT1G02950 glutathione S-transferase F4 glutathione S-transferase F4,
GLUTATHIONE S-TRANSFERASE 31,
glutathione S-transferase F4		 -0.6 0.29 -0.27
36 AT1G52510 alpha/beta-Hydrolases superfamily protein -0.6 0.29 -0.32
37 AT2G25010 Aminotransferase-like, plant mobile domain family protein -0.6 0.31 -0.29
38 AT4G27435 Protein of unknown function (DUF1218) -0.6 0.32 -0.33
39 AT5G17530 phosphoglucosamine mutase family protein -0.6 0.28 -0.35
40 AT4G15250 B-box type zinc finger protein with CCT domain -0.6 0.32 -0.31
41 AT4G27980 Domain of unknown function (DUF3444) 0.6 0.3 -0.31
42 AT3G51250 Senescence/dehydration-associated protein-related -0.59 0.31 -0.31
43 AT3G03860 APR-like 5 APR-like 5, APR-like 5 -0.59 0.33 -0.32
44 AT4G34330 Protein of unknown function (DUF677) 0.59 0.34 -0.31
45 AT1G49015 DPP6 N-terminal domain-like protein 0.59 0.3 -0.35
46 AT4G14880 O-acetylserine (thiol) lyase (OAS-TL) isoform A1 ATCYS-3A, CYTACS1, O-acetylserine
(thiol) lyase (OAS-TL) isoform A1,
ONSET OF LEAF DEATH 3		 -0.59 0.33 -0.3
47 AT3G54860 Sec1/munc18-like (SM) proteins superfamily ATVPS33, VACUOLAR PROTEIN SORTING
33		 -0.59 0.33 -0.31
48 AT5G03420 5'-AMP-activated protein kinase-related -0.59 0.34 -0.31
49 AT5G05200 Protein kinase superfamily protein -0.59 0.33 -0.33
50 AT3G30846 transposable element gene -0.59 0.31 -0.33
51 AT4G20070 allantoate amidohydrolase allantoate amidohydrolase,
allantoate amidohydrolase		 -0.59 0.32 -0.31
52 AT1G22750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1475 (InterPro:IPR009943);
Has 185 Blast hits to 155 proteins in 21 species: Archae -
0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).		 -0.59 0.33 -0.33
53 AT5G07660 structural maintenance of chromosomes 6A structural maintenance of
chromosomes 6A		 -0.59 0.34 -0.31
54 AT5G58610 PHD finger transcription factor, putative 0.59 0.31 -0.31
55 AT1G33890 Avirulence induced gene (AIG1) family protein 0.59 0.32 -0.31
56 AT1G11540 Sulfite exporter TauE/SafE family protein 0.59 0.3 -0.32
57 AT5G09500 Ribosomal protein S19 family protein 0.59 0.32 -0.31
58 AT1G59670 glutathione S-transferase TAU 15 glutathione S-transferase TAU 15,
glutathione S-transferase TAU 15		 -0.58 0.33 -0.32
59 AT5G49870 Mannose-binding lectin superfamily protein 0.58 0.3 -0.29
60 AT2G38110 glycerol-3-phosphate acyltransferase 6 GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 6,
glycerol-3-phosphate
acyltransferase 6		 -0.58 0.32 -0.31
61 AT2G35580 Serine protease inhibitor (SERPIN) family protein -0.58 0.34 -0.32
62 AT5G41480 Folylpolyglutamate synthetase family protein A. THALIANA DHFS-FPGS HOMOLOG A,
DHFS-FPGS HOMOLOG A, EMBRYO
DEFECTIVE 9, GLOBULAR ARREST1		 -0.58 0.31 -0.3
63 AT1G65260 plastid transcriptionally active 4 plastid transcriptionally active
4, VESICLE-INDUCING PROTEIN IN
PLASTIDS 1		 -0.58 0.31 -0.31
64 AT4G17040 CLP protease R subunit 4 CLP protease R subunit 4, happy on
norflurazon 5		 -0.58 0.31 -0.3
65 AT5G10490 MSCS-like 2 MSCS-like 2 -0.58 0.32 -0.33
66 AT3G57810 Cysteine proteinases superfamily protein -0.58 0.31 -0.3
67 AT3G50190 Plant protein of unknown function (DUF247) 0.57 0.31 -0.31
68 AT4G16820 alpha/beta-Hydrolases superfamily protein phospholipase A I beta 2 -0.57 0.29 -0.33
69 AT4G33510 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase 3-deoxy-d-arabino-heptulosonate
7-phosphate synthase		 -0.57 0.32 -0.32
70 AT3G09150 phytochromobilin:ferredoxin oxidoreductase, chloroplast /
phytochromobilin synthase (HY2)		 ARABIDOPSIS ELONGATED HYPOCOTYL 2,
GENOMES UNCOUPLED 3, ELONGATED
HYPOCOTYL 2		 -0.57 0.32 -0.36
71 AT5G06440 BEST Arabidopsis thaliana protein match is: Polyketide
cyclase/dehydrase and lipid transport superfamily protein
(TAIR:AT3G11720.3); Has 155 Blast hits to 153 proteins in
39 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi -
6; Plants - 101; Viruses - 0; Other Eukaryotes - 39
(source: NCBI BLink).		 -0.57 0.32 -0.31
72 AT2G05810 ARM repeat superfamily protein 0.57 0.32 -0.33
73 AT2G36920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02870.1); Has 13 Blast hits to 11
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.33 -0.3
74 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 -0.57 0.31 -0.31
75 AT5G07730 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.57 0.31 -0.32
76 AT2G44930 Plant protein of unknown function (DUF247) -0.57 0.29 -0.32
77 AT5G46240 potassium channel in Arabidopsis thaliana 1 potassium channel in Arabidopsis
thaliana 1		 -0.57 0.31 -0.31
78 AT5G14420 RING domain ligase2 RING domain ligase2 -0.57 0.32 -0.32
79 AT4G13260 Flavin-binding monooxygenase family protein YUCCA2 -0.57 0.34 -0.3
80 AT3G04390 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin
binding protein		 -0.57 0.31 -0.33
81 AT2G21940 shikimate kinase 1 ATSK1, shikimate kinase 1 -0.57 0.32 -0.34
82 AT1G56010 NAC domain containing protein 1 Arabidopsis NAC domain containing
protein 21, Arabidopsis NAC domain
containing protein 22, NAC domain
containing protein 1		 0.56 0.29 -0.31
83 AT5G63650 SNF1-related protein kinase 2.5 SNRK2-5, SNF1-related protein
kinase 2.5, SNF1-RELATED PROTEIN
KINASE 2H		 0.56 0.32 -0.32
84 AT5G65630 global transcription factor group E7 global transcription factor group
E7		 0.55 0.32 -0.31
85 AT1G31220 Formyl transferase 0.55 0.32 -0.31
86 AT5G21130 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.55 0.33 -0.31
87 AT5G40840 Rad21/Rec8-like family protein Sister chromatid cohesion 1 (SCC1)
protein homolog 2, SYN2		 0.54 0.31 -0.31
88 AT5G03670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits
to 624 proteins in 104 species: Archae - 0; Bacteria - 18;
Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other
Eukaryotes - 192 (source: NCBI BLink).		 0.54 0.31 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0151 Monogalactosyldiacylgycerol-34:4 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		0.78 0.51 -0.51 C0151
90 C0121 Isoheptylglucosinolate - - - 0.69 0.45 -0.46
91 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		-0.66 0.44 -0.46 C0011
92 C0230 Rutin - - polyphenol biosynthesis 0.61 0.43 -0.45
93 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		0.61 0.45 -0.43 C0035