AT2G23980 : cyclic nucleotide-gated channel 6
Query Information
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AGICode AT2G23980
Description cyclic nucleotide-gated channel 6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G23980 cyclic nucleotide-gated channel 6 cyclic nucleotide-gated channel 6,
CYCLIC NUCLEOTIDE GATED CHANNEL 6,
cyclic nucleotide-gated channel 6		 1 0.31 -0.31
2 AT1G12360 Sec1/munc18-like (SM) proteins superfamily keule 0.76 0.31 -0.32
3 AT5G43560 TRAF-like superfamily protein 0.75 0.31 -0.31
4 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.74 0.33 -0.33
5 AT1G75780 tubulin beta-1 chain tubulin beta-1 chain -0.74 0.34 -0.32
6 AT2G41290 strictosidine synthase-like 2 strictosidine synthase-like 2 -0.74 0.31 -0.3
7 AT2G28080 UDP-Glycosyltransferase superfamily protein -0.74 0.31 -0.3
8 AT3G27260 global transcription factor group E8 global transcription factor group
E8		 0.74 0.3 -0.3
9 AT4G13550 triglyceride lipases;triglyceride lipases 0.73 0.31 -0.3
10 AT3G47990 SUGAR-INSENSITIVE 3 SUGAR-INSENSITIVE 3 0.73 0.32 -0.32
11 AT3G01310 Phosphoglycerate mutase-like family protein 0.73 0.33 -0.35
12 AT1G61260 Protein of unknown function (DUF761) -0.73 0.34 -0.31
13 AT3G09850 D111/G-patch domain-containing protein 0.72 0.31 -0.32
14 AT1G05210 Transmembrane protein 97, predicted -0.72 0.32 -0.3
15 AT3G52940 Ergosterol biosynthesis ERG4/ERG24 family EXTRA-LONG-LIFESPAN 1, FACKEL,
HYD2		 -0.71 0.3 -0.34
16 AT5G20380 phosphate transporter 4;5 phosphate transporter 4;5 0.71 0.32 -0.29
17 AT4G38370 Phosphoglycerate mutase family protein -0.7 0.31 -0.3
18 AT5G43930 Transducin family protein / WD-40 repeat family protein 0.7 0.32 -0.33
19 AT5G16590 Leucine-rich repeat protein kinase family protein Leucine rich repeat protein 1 -0.7 0.31 -0.35
20 AT4G14750 IQ-domain 19 IQ-domain 19 -0.7 0.31 -0.33
21 AT1G32130 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS1 (FROM
YEAST INTERACTS WITH SPT6), HIGH
NITROGEN INSENSITIVE 9, IWS1		 0.7 0.31 -0.31
22 AT1G18160 Protein kinase superfamily protein 0.7 0.32 -0.29
23 AT5G35180 Protein of unknown function (DUF1336) 0.7 0.32 -0.32
24 AT3G14010 CTC-interacting domain 4 CTC-interacting domain 4 0.69 0.31 -0.3
25 AT5G66590 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.69 0.32 -0.31
26 AT4G22010 SKU5 similar 4 SKU5 similar 4 -0.69 0.31 -0.31
27 AT1G17440 Transcription initiation factor TFIID subunit A CYTOKININ-HYPERSENSITIVE 1,
ENHANCED ETHYLENE RESPONSE 4,
TBP-ASSOCIATED FACTOR 12B		 0.69 0.32 -0.32
28 AT5G01620 TRICHOME BIREFRINGENCE-LIKE 35 TRICHOME BIREFRINGENCE-LIKE 35 -0.69 0.31 -0.32
29 AT1G30840 purine permease 4 purine permease 4, purine permease
4		 -0.68 0.32 -0.32
30 AT2G01460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.29 -0.32
31 AT3G46270 receptor protein kinase-related -0.68 0.29 -0.3
32 AT2G28910 CAX interacting protein 4 CAX interacting protein 4 0.68 0.3 -0.33
33 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 0.68 0.3 -0.31
34 AT3G48860 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins
in 897 species: Archae - 180; Bacteria - 1190; Metazoa -
6552; Fungi - 1361; Plants - 886; Viruses - 50; Other
Eukaryotes - 2210 (source: NCBI BLink).		 0.68 0.33 -0.32
35 AT1G05890 RING/U-box superfamily protein ARIADNE 5, ARABIDOPSIS ARIADNE 5 0.68 0.3 -0.31
36 AT1G79440 aldehyde dehydrogenase 5F1 aldehyde dehydrogenase 5F1,
ENLARGED FIL EXPRESSION DOMAIN 1,
SUCCINIC SEMIALDEHYDE
DEHYDROGENASE, SUCCINIC
SEMIALDEHYDE DEHYDROGENASE 1		 0.68 0.34 -0.29
37 AT1G04040 HAD superfamily, subfamily IIIB acid phosphatase -0.68 0.32 -0.3
38 AT4G32160 Phox (PX) domain-containing protein 0.68 0.29 -0.31
39 AT2G32720 cytochrome B5 isoform B ARABIDOPSIS CYTOCHROME B5 ISOFORM
B, B5 #4, cytochrome B5 isoform B		 -0.67 0.32 -0.33
40 AT3G53890 Ribosomal protein S21e -0.67 0.33 -0.35
41 AT4G33240 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion
binding;1-phosphatidylinositol-3-phosphate 5-kinases		 FORMS APLOID AND BINUCLEATE CELLS
1A		 0.67 0.34 -0.3
42 AT1G04300 TRAF-like superfamily protein 0.67 0.28 -0.32
43 AT2G42610 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 10 -0.67 0.31 -0.3
44 AT1G71030 MYB-like 2 ARABIDOPSIS MYB-LIKE 2, MYB-like 2 0.67 0.31 -0.29
45 AT2G31955 cofactor of nitrate reductase and xanthine dehydrogenase 2 cofactor of nitrate reductase and
xanthine dehydrogenase 2		 0.67 0.33 -0.29
46 AT5G26240 chloride channel D ATCLC-D, chloride channel D 0.66 0.3 -0.31
47 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 0.66 0.32 -0.32
48 AT2G21200 SAUR-like auxin-responsive protein family -0.66 0.31 -0.32
49 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 -0.66 0.35 -0.31
50 AT1G07410 RAB GTPase homolog A2B ARABIDOPSIS RAB GTPASE HOMOLOG
A2B, RAB GTPase homolog A2B, RAB
GTPASE HOMOLOG A2B, RAB GTPase
homolog A2B		 -0.66 0.35 -0.3
51 AT3G02790 zinc finger (C2H2 type) family protein -0.66 0.32 -0.32
52 AT3G20270 lipid-binding serum glycoprotein family protein 0.66 0.31 -0.31
53 AT5G10940 transducin family protein / WD-40 repeat family protein ALTERED SEED GERMINATION 2 0.66 0.31 -0.32
54 AT1G49320 unknown seed protein like 1 unknown seed protein like 1,
unknown seed protein like 1		 -0.65 0.33 -0.31
55 AT2G43850 Integrin-linked protein kinase family 0.65 0.29 -0.35
56 AT1G30490 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB9, PHAVOLUTA 0.65 0.34 -0.29
57 AT5G10260 RAB GTPase homolog H1E RAB GTPase homolog H1E, RAB GTPase
homolog H1E		 -0.65 0.31 -0.33
58 AT1G13380 Protein of unknown function (DUF1218) -0.65 0.3 -0.28
59 AT1G55830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF812 (InterPro:IPR008530); Has 10940
Blast hits to 7289 proteins in 653 species: Archae - 228;
Bacteria - 791; Metazoa - 6174; Fungi - 805; Plants - 342;
Viruses - 19; Other Eukaryotes - 2581 (source: NCBI BLink).		 0.65 0.31 -0.33
60 AT3G63070 Tudor/PWWP/MBT domain-containing protein 0.64 0.29 -0.32
61 AT1G61280 Phosphatidylinositol N-acetylglucosaminyltransferase,
GPI19/PIG-P subunit		 -0.64 0.32 -0.29
62 AT5G41760 Nucleotide-sugar transporter family protein -0.64 0.32 -0.31
63 AT1G65310 xyloglucan endotransglucosylase/hydrolase 17 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 17,
xyloglucan
endotransglucosylase/hydrolase 17		 -0.64 0.32 -0.33
64 AT4G31540 exocyst subunit exo70 family protein G1 exocyst subunit exo70 family
protein G1, exocyst subunit exo70
family protein G1		 0.64 0.29 -0.31
65 AT3G46810 Cysteine/Histidine-rich C1 domain family protein -0.64 0.3 -0.3
66 AT1G69310 WRKY DNA-binding protein 57 ATWRKY57, WRKY DNA-binding protein
57		 0.64 0.31 -0.34
67 AT5G19330 ARM repeat protein interacting with ABF2 ARM repeat protein interacting
with ABF2		 0.64 0.32 -0.31
68 AT4G37460 Tetratricopeptide repeat (TPR)-like superfamily protein SUPPRESSOR OF RPS4-RLD 1 0.64 0.32 -0.3
69 AT1G10570 Cysteine proteinases superfamily protein OVERLY TOLERANT TO SALT 2, UB-LIKE
PROTEASE 1C		 0.63 0.33 -0.33
70 AT1G21160 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.63 0.31 -0.32
71 AT2G44740 cyclin p4;1 cyclin p4;1 -0.63 0.29 -0.31
72 AT3G48100 response regulator 5 response regulator 5, ARABIDOPSIS
THALIANA RESPONSE REGULATOR 2,
INDUCED BY CYTOKININ 6, response
regulator 5		 -0.63 0.31 -0.31
73 AT3G01540 DEAD box RNA helicase 1 ARABIDOPSIS THALIANA DEAD BOX RNA
HELICASE 1, DEAD box RNA helicase
1		 0.63 0.29 -0.3
74 AT2G21180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits
to 124 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.3 -0.32
75 AT4G12760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.63 0.28 -0.3
76 AT3G07274 unknown pseudogene 0.63 0.33 -0.34
77 AT3G12610 Leucine-rich repeat (LRR) family protein DNA-DAMAGE REPAIR/TOLERATION 100 -0.63 0.32 -0.33
78 AT3G10700 galacturonic acid kinase galacturonic acid kinase -0.62 0.32 -0.32
79 AT1G34770 CONTAINS InterPro DOMAIN/s: MAGE protein
(InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins
in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104;
Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76
(source: NCBI BLink).		 -0.62 0.31 -0.32
80 AT5G15600 SPIRAL1-like4 SPIRAL1-like4 -0.62 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
81 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		0.73 0.44 -0.45 C0225
82 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		0.65 0.45 -0.44 C0107