AGICode | AT2G16910 |
Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G16910 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
ABORTED MICROSPORES | 1 | 0.29 | -0.3 | ||
2 | AT1G47640 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2053, membrane (InterPro:IPR019164); Has 204 Blast hits to 204 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). |
-0.65 | 0.34 | -0.3 | |||
3 | AT1G68920 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.64 | 0.31 | -0.32 | |||
4 | AT1G09090 | respiratory burst oxidase homolog B | respiratory burst oxidase homolog B, ATRBOHB-BETA, respiratory burst oxidase homolog B |
-0.64 | 0.33 | -0.33 | ||
5 | AT1G77080 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 27, FLOWERING LOCUS M, MADS AFFECTING FLOWERING 1 |
0.63 | 0.34 | -0.32 | ||
6 | AT4G17010 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.62 | 0.3 | -0.35 | |||
7 | AT1G80800 | pseudogene, 40S ribosomal protein S12 (RPS12B), similar to ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum vulgare); blastp match of 65% identity and 4.7e-12 P-value to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S ribosomal protein S12 {Oryza sativa (japonica cultivar-group)} |
0.61 | 0.29 | -0.32 | |||
8 | AT1G61500 | S-locus lectin protein kinase family protein | 0.6 | 0.32 | -0.35 | |||
9 | AT3G14940 | phosphoenolpyruvate carboxylase 3 | phosphoenolpyruvate carboxylase 3, phosphoenolpyruvate carboxylase 3 |
-0.6 | 0.32 | -0.31 | ||
10 | AT1G04180 | YUCCA 9 | YUCCA 9 | -0.6 | 0.3 | -0.32 | ||
11 | AT1G68200 | Zinc finger C-x8-C-x5-C-x3-H type family protein | -0.6 | 0.3 | -0.32 | |||
12 | AT3G44180 | syntaxin-related family protein | 0.59 | 0.33 | -0.33 | |||
13 | AT4G08220 | transposable element gene | -0.59 | 0.32 | -0.32 | |||
14 | AT1G79670 | Wall-associated kinase family protein | RESISTANCE TO FUSARIUM OXYSPORUM 1, WAKL22 |
-0.58 | 0.31 | -0.33 | ||
15 | AT5G08335 | Isoprenylcysteine carboxyl methyltransferase (ICMT) family | ARABIDOPSIS THALIANA ISOPRENYL CYSTEINE METHYLTRANSFERASE B, ATSTE14B, ISOPRENYL CYSTEINE METHYLTRANSFERASE B |
-0.58 | 0.31 | -0.33 | ||
16 | AT3G12150 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2048 (InterPro:IPR019149); Has 421 Blast hits to 334 proteins in 155 species: Archae - 2; Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
-0.58 | 0.33 | -0.32 | |||
17 | AT2G46860 | pyrophosphorylase 3 | pyrophosphorylase 3, pyrophosphorylase 3 |
-0.58 | 0.31 | -0.31 | ||
18 | AT4G27000 | RNA-binding (RRM/RBD/RNP motifs) family protein | ATRBP45C | -0.57 | 0.3 | -0.33 | ||
19 | AT1G05880 | RING/U-box superfamily protein | ARIADNE 12, ARABIDOPSIS ARIADNE 12 | 0.57 | 0.31 | -0.29 | ||
20 | AT2G17390 | ankyrin repeat-containing 2B | ankyrin repeat-containing 2B | -0.57 | 0.32 | -0.31 | ||
21 | AT1G02450 | NIM1-interacting 1 | NIMIN-1, NIM1-interacting 1 | 0.56 | 0.32 | -0.32 | ||
22 | AT5G45560 | Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein |
0.56 | 0.3 | -0.32 | |||
23 | AT5G24620 | Pathogenesis-related thaumatin superfamily protein | 0.56 | 0.33 | -0.3 | |||
24 | AT5G25070 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.56 | 0.31 | -0.32 | |||
25 | AT1G50060 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
-0.56 | 0.33 | -0.29 | |||
26 | AT1G73700 | MATE efflux family protein | 0.55 | 0.3 | -0.3 | |||
27 | AT2G17370 | 3-hydroxy-3-methylglutaryl-CoA reductase 2 | 3-hydroxy-3-methylglutaryl-CoA reductase 2, 3-HYDROXY-3-METHYLGLUTARYL-COENZYM E A REDUCTASE 2 |
-0.55 | 0.31 | -0.32 | ||
28 | AT5G24313 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.55 | 0.31 | -0.33 | |||
29 | AT5G10530 | Concanavalin A-like lectin protein kinase family protein | 0.55 | 0.32 | -0.32 | |||
30 | AT4G01680 | myb domain protein 55 | myb domain protein 55, myb domain protein 55 |
-0.55 | 0.3 | -0.32 | ||
31 | AT5G18040 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.55 | 0.31 | -0.3 | |||
32 | AT3G08900 | reversibly glycosylated polypeptide 3 | RGP, reversibly glycosylated polypeptide 3 |
0.55 | 0.31 | -0.33 | ||
33 | AT3G01250 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 50 Blast hits to 50 proteins in 23 species: Archae - 0; Bacteria - 28; Metazoa - 15; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.55 | 0.33 | -0.3 | |||
34 | AT1G05670 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.55 | 0.32 | -0.3 | |||
35 | AT5G47000 | Peroxidase superfamily protein | -0.54 | 0.3 | -0.31 | |||
36 | AT5G37980 | Zinc-binding dehydrogenase family protein | 0.54 | 0.32 | -0.32 | |||
37 | AT5G04470 | cyclin-dependent protein kinase inhibitors | SIAMESE | -0.54 | 0.28 | -0.32 | ||
38 | AT5G17800 | myb domain protein 56 | myb domain protein 56, myb domain protein 56 |
-0.54 | 0.32 | -0.33 | ||
39 | AT1G31620 | unknown protein; Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.33 | -0.32 | |||
40 | AT3G25510 | disease resistance protein (TIR-NBS-LRR class), putative | -0.53 | 0.33 | -0.34 | |||
41 | AT3G44030 | pseudogene, similar to OSJNBb0043H09.1, blastp match of 40% identity and 8.4e-38 P-value to GP|21740634|emb|CAD40195.1||AL606611 OSJNBb0043H09.1 {Oryza sativa (japonica cultivar-group)} |
0.53 | 0.34 | -0.3 | |||
42 | AT1G65950 | Protein kinase superfamily protein | 0.53 | 0.31 | -0.33 | |||
43 | AT5G46795 | microspore-specific promoter 2 | microspore-specific promoter 2 | 0.53 | 0.31 | -0.32 | ||
44 | AT1G30870 | Peroxidase superfamily protein | -0.53 | 0.32 | -0.33 | |||
45 | AT3G23010 | receptor like protein 36 | receptor like protein 36, receptor like protein 36 |
0.53 | 0.32 | -0.32 | ||
46 | AT2G05530 | Glycine-rich protein family | -0.53 | 0.32 | -0.31 | |||
47 | AT5G32490 | transposable element gene | 0.52 | 0.3 | -0.31 | |||
48 | AT2G15810 | transposable element gene | 0.52 | 0.31 | -0.32 | |||
49 | AT2G17150 | Plant regulator RWP-RK family protein | -0.52 | 0.31 | -0.33 | |||
50 | AT2G06310 | transposable element gene | 0.52 | 0.32 | -0.31 | |||
51 | AT4G32360 | Pyridine nucleotide-disulphide oxidoreductase family protein |
0.52 | 0.29 | -0.3 | |||
52 | AT2G46410 | Homeodomain-like superfamily protein | CAPRICE | -0.52 | 0.33 | -0.31 | ||
53 | AT5G23330 | Nucleotidylyl transferase superfamily protein | 0.52 | 0.3 | -0.31 | |||
54 | AT2G40310 | Pectin lyase-like superfamily protein | 0.52 | 0.3 | -0.31 | |||
55 | AT5G59100 | Subtilisin-like serine endopeptidase family protein | -0.51 | 0.33 | -0.3 | |||
56 | AT2G47340 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.51 | 0.31 | -0.3 | |||
57 | AT5G10420 | MATE efflux family protein | 0.51 | 0.33 | -0.3 | |||
58 | AT1G44740 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 8 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.51 | 0.33 | -0.34 | |||
59 | AT2G26040 | PYR1-like 2 | PYR1-like 2, regulatory components of ABA receptor 14 |
-0.51 | 0.32 | -0.33 | ||
60 | AT3G26480 | Transducin family protein / WD-40 repeat family protein | 0.51 | 0.29 | -0.31 | |||
61 | AT4G15370 | baruol synthase 1 | baruol synthase 1, PENTACYCLIC TRITERPENE SYNTHASE 2 |
-0.51 | 0.34 | -0.31 | ||
62 | AT5G07200 | gibberellin 20-oxidase 3 | ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3, gibberellin 20-oxidase 3, YAP169 |
-0.5 | 0.34 | -0.3 | ||
63 | AT4G08000 | transposable element gene | 0.5 | 0.34 | -0.31 | |||
64 | AT1G02620 | Ras-related small GTP-binding family protein | 0.5 | 0.3 | -0.31 | |||
65 | AT4G00020 | BREAST CANCER 2 like 2A | BREAST CANCER 2 like 2A, BRCA2A, EMBRYO SAC DEVELOPMENT ARREST 20, MATERNAL EFFECT EMBRYO ARREST 43 |
0.49 | 0.32 | -0.31 | ||
66 | AT2G21310 | transposable element gene | 0.49 | 0.32 | -0.32 | |||
67 | AT3G54060 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits to 322 proteins in 98 species: Archae - 0; Bacteria - 178; Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other Eukaryotes - 84 (source: NCBI BLink). |
0.49 | 0.31 | -0.32 | |||
68 | AT1G07550 | Leucine-rich repeat protein kinase family protein | 0.49 | 0.31 | -0.3 | |||
69 | AT5G34880 | transposable element gene | -0.49 | 0.31 | -0.32 | |||
70 | AT3G27785 | myb domain protein 118 | ATMYB118, myb domain protein 118, PLANT GROWTH ACTIVATOR 37 |
0.49 | 0.34 | -0.32 | ||
71 | AT1G13190 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.49 | 0.33 | -0.33 | |||
72 | AT5G52670 | Copper transport protein family | -0.49 | 0.31 | -0.3 | |||
73 | AT5G03690 | Aldolase superfamily protein | -0.49 | 0.32 | -0.32 | |||
74 | AT4G15810 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.48 | 0.32 | -0.3 | |||
75 | AT4G11920 | cell cycle switch protein 52 A2 | cell cycle switch protein 52 A2, FIZZY-RELATED 1 |
0.48 | 0.31 | -0.32 | ||
76 | AT4G31520 | SDA1 family protein | 0.48 | 0.3 | -0.34 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
77 | C0232 | Shikimic acid | - | Shikimate | phenylpropanoid biosynthesis, chorismate biosynthesis, simple coumarins biosynthesis |
0.54 | 0.3 | -0.3 |