AT2G16940 : -
Query Information
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AGICode AT2G16940
Description Splicing factor, CC1-like
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G16940 Splicing factor, CC1-like 1 0.3 -0.33
2 AT1G05060 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.76 0.3 -0.31
3 AT3G13570 SC35-like splicing factor 30A SC35-like splicing factor 30A,
SC35-like splicing factor 30A		 0.74 0.33 -0.31
4 AT3G53500 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32		 0.72 0.31 -0.31
5 AT5G45350 proline-rich family protein -0.71 0.33 -0.33
6 AT1G02840 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34, ATSRP34, SR1,
Serine/Arginine-Rich Protein
Splicing Factor 34, SRP34		 0.71 0.33 -0.28
7 AT1G56700 Peptidase C15, pyroglutamyl peptidase I-like -0.71 0.3 -0.33
8 AT1G72050 transcription factor IIIA transcription factor IIIA 0.71 0.31 -0.32
9 AT5G42850 Thioredoxin superfamily protein -0.7 0.32 -0.3
10 AT3G01360 Family of unknown function (DUF716) -0.69 0.3 -0.3
11 AT1G10150 Carbohydrate-binding protein -0.69 0.3 -0.31
12 AT1G60560 SWIM zinc finger family protein 0.69 0.28 -0.33
13 AT3G14890 phosphoesterase 0.69 0.31 -0.31
14 AT5G27840 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP8 -0.69 0.32 -0.31
15 AT1G15280 CASC3/Barentsz eIF4AIII binding 0.68 0.31 -0.33
16 AT4G14615 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2346
(InterPro:IPR018625); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52825.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.68 0.32 -0.3
17 AT4G00310 Putative membrane lipoprotein EMBRYO SAC DEVELOPMENT ARREST 8,
MATERNAL EFFECT EMBRYO ARREST 46		 0.68 0.33 -0.34
18 AT5G10960 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.68 0.33 -0.31
19 AT1G30360 Early-responsive to dehydration stress protein (ERD4) early-responsive to dehydration 4 0.68 0.33 -0.32
20 AT5G09880 Splicing factor, CC1-like 0.68 0.32 -0.33
21 AT1G78650 DNA-directed DNA polymerases POLD3 0.67 0.33 -0.31
22 AT3G28940 AIG2-like (avirulence induced gene) family protein -0.67 0.3 -0.32
23 AT5G55480 SHV3-like 1 Glycerophosphodiester
phosphodiesterase (GDPD) like 4,
glycerophosphodiesterase-like 1,
SHV3-like 1		 0.67 0.32 -0.34
24 AT3G15760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.3
25 AT1G55000 peptidoglycan-binding LysM domain-containing protein -0.67 0.31 -0.3
26 AT4G22753 sterol 4-alpha methyl oxidase 1-3 ATSMO1-3, sterol 4-alpha methyl
oxidase 1-3		 -0.67 0.32 -0.32
27 AT4G25500 arginine/serine-rich splicing factor 35 arginine/serine-rich splicing
factor 40, AT-SRP40, ARABIDOPSIS
THALIANA ARGININE/SERINE-RICH
SPLICING FACTOR 35, ATRSP40,
arginine/serine-rich splicing
factor 40, arginine/serine-rich
splicing factor 35		 0.67 0.29 -0.3
28 AT2G36360 Galactose oxidase/kelch repeat superfamily protein -0.66 0.32 -0.29
29 AT5G57110 autoinhibited Ca2+ -ATPase, isoform 8 autoinhibited Ca2+ -ATPase,
isoform 8, AUTOINHIBITED CA2+
-ATPASE, ISOFORM 8		 0.66 0.31 -0.31
30 AT5G16780 SART-1 family DEFECTIVELY ORGANIZED TRIBUTARIES
2, MERISTEM-DEFECTIVE		 0.65 0.33 -0.33
31 AT3G05980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits
to 202 proteins in 28 species: Archae - 0; Bacteria - 0;
Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 0.65 0.33 -0.33
32 AT3G53180 glutamate-ammonia ligases;catalytics;glutamate-ammonia
ligases		 nodulin/glutamine synthase-like
protein		 -0.65 0.32 -0.3
33 AT4G35220 Cyclase family protein -0.65 0.33 -0.29
34 AT3G61540 alpha/beta-Hydrolases superfamily protein -0.64 0.32 -0.31
35 AT1G18150 Protein kinase superfamily protein ATMPK8, MPK8 0.64 0.31 -0.34
36 AT5G17030 UDP-glucosyl transferase 78D3 UDP-glucosyl transferase 78D3 0.64 0.31 -0.3
37 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 0.64 0.3 -0.3
38 AT2G25570 binding -0.64 0.32 -0.32
39 AT1G80020 transposable element gene 0.64 0.33 -0.3
40 AT3G09540 Pectin lyase-like superfamily protein 0.63 0.3 -0.29
41 AT5G19120 Eukaryotic aspartyl protease family protein -0.63 0.3 -0.32
42 AT4G31140 O-Glycosyl hydrolases family 17 protein 0.63 0.31 -0.3
43 AT3G26450 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.63 0.32 -0.33
44 AT3G59800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G43795.2); Has 15361 Blast
hits to 8061 proteins in 537 species: Archae - 2; Bacteria
- 622; Metazoa - 7561; Fungi - 1246; Plants - 920; Viruses
- 49; Other Eukaryotes - 4961 (source: NCBI BLink).		 0.63 0.33 -0.33
45 AT3G14100 RNA-binding (RRM/RBD/RNP motifs) family protein -0.63 0.3 -0.32
46 AT2G29210 splicing factor PWI domain-containing protein 0.63 0.32 -0.3
47 AT1G13120 embryo defective 1745 0.63 0.32 -0.3
48 AT3G04620 Alba DNA/RNA-binding protein D NUCLDUO1-ACTIVATEEIC ACID
BINDING PROTEIN 1		 0.62 0.32 -0.31
49 AT1G22040 Galactose oxidase/kelch repeat superfamily protein -0.62 0.34 -0.31
50 AT3G09470 Major facilitator superfamily protein -0.62 0.31 -0.32
51 AT2G44760 Domain of unknown function (DUF3598) -0.62 0.32 -0.33
52 AT1G21770 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.62 0.33 -0.31
53 AT2G17870 cold shock domain protein 3 ARABIDOPSIS COLD SHOCK DOMAIN
PROTEIN 3, cold shock domain
protein 3		 0.62 0.32 -0.33
54 AT1G12370 photolyase 1 photolyase 1, UV RESISTANCE 2 0.62 0.31 -0.3
55 AT4G38460 geranylgeranyl reductase geranylgeranyl reductase -0.61 0.32 -0.3
56 AT1G07230 non-specific phospholipase C1 non-specific phospholipase C1 -0.61 0.32 -0.31
57 AT2G42390 protein kinase C substrate, heavy chain-related -0.61 0.3 -0.34
58 AT1G72560 ARM repeat superfamily protein PAUSED 0.61 0.31 -0.33
59 AT1G75130 cytochrome P450, family 721, subfamily A, polypeptide 1 cytochrome P450, family 721,
subfamily A, polypeptide 1		 -0.61 0.34 -0.32
60 AT5G22740 cellulose synthase-like A02 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE-LIKE A02, ARABIDOPSIS
THALIANA CELLULOSE SYNTHASE-LIKE
A2, cellulose synthase-like A02,
CELLULOSE SYNTHASE-LIKE A 2		 0.61 0.3 -0.3
61 AT5G58490 NAD(P)-binding Rossmann-fold superfamily protein -0.61 0.33 -0.33
62 AT5G46070 Guanylate-binding family protein 0.61 0.33 -0.31
63 AT2G43980 inositol 1,3,4-trisphosphate 5/6-kinase 4 inositol 1,3,4-trisphosphate
5/6-kinase 4, inositol
1,3,4-trisphosphate 5/6-kinase 4		 -0.61 0.31 -0.33
64 AT1G31820 Amino acid permease family protein -0.61 0.31 -0.32
65 AT2G01680 Ankyrin repeat family protein -0.6 0.33 -0.31
66 AT2G32080 purin-rich alpha 1 purin-rich alpha 1 -0.6 0.32 -0.32
67 AT1G56280 drought-induced 19 drought-induced 19,
drought-induced 19		 -0.6 0.29 -0.32
68 AT1G02090 Proteasome component (PCI) domain protein ARABIDOPSIS THALIANA COP9
SIGNALOSOME SUBUNIT 7,
CONSTITUTIVE PHOTOMORPHOGENIC 15,
COP9 SIGNALOSOME SUBUNIT 7, FUSCA
5		 0.6 0.33 -0.33
69 AT3G50270 HXXXD-type acyl-transferase family protein -0.6 0.3 -0.34
70 AT1G79630 Protein phosphatase 2C family protein 0.6 0.3 -0.31
71 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.6 0.32 -0.32
72 AT5G51300 splicing factor-related 0.6 0.31 -0.31
73 AT4G17150 alpha/beta-Hydrolases superfamily protein 0.59 0.31 -0.33
74 AT5G23430 Transducin/WD40 repeat-like superfamily protein 0.59 0.35 -0.3
75 AT4G23410 tetraspanin5 tetraspanin5 -0.59 0.34 -0.3
76 AT2G34690 Glycolipid transfer protein (GLTP) family protein ACCELERATED CELL DEATH 11 -0.59 0.32 -0.32
77 AT4G21060 Galactosyltransferase family protein 0.59 0.29 -0.3
78 AT4G12010 Disease resistance protein (TIR-NBS-LRR class) family -0.58 0.33 -0.31
79 AT5G61440 atypical CYS HIS rich thioredoxin 5 atypical CYS HIS rich thioredoxin
5		 -0.58 0.32 -0.34
80 AT5G67150 HXXXD-type acyl-transferase family protein -0.58 0.33 -0.3
81 AT2G31670 Stress responsive alpha-beta barrel domain protein -0.58 0.31 -0.31
82 AT3G01910 sulfite oxidase AT-SO, AtSO, sulfite oxidase -0.57 0.31 -0.32
83 AT1G54740 Protein of unknown function (DUF3049) -0.57 0.32 -0.33
84 AT1G32310 unknown protein; Has 28 Blast hits to 28 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.3 -0.31
85 AT3G15353 metallothionein 3 ATMT3, metallothionein 3 -0.57 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
86 C0093 Galactinol dihydrate - Galactinol galactosylcyclitol biosynthesis,
stachyose biosynthesis,
ajugose biosynthesis I (galactinol-dependent) 		0.72 0.43 -0.44 C0093