AT2G35110 : GNARLED
Query Information
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AGICode AT2G35110
Description transcription activators
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G35110 transcription activators GNARLED, NCK-ASSOCIATED PROTEIN 1,
NAPP		 1 0.3 -0.31
2 AT5G61220 LYR family of Fe/S cluster biogenesis protein -0.73 0.32 -0.31
3 AT5G50370 Adenylate kinase family protein -0.73 0.32 -0.32
4 AT3G57870 sumo conjugation enzyme 1 AHUS5, SUMO CONJUGATION ENZYME 1,
EMBRYO DEFECTIVE 1637, sumo
conjugation enzyme 1, SUMO
CONJUGATING ENZYME 1A		 -0.71 0.31 -0.31
5 AT3G61690 nucleotidyltransferases 0.69 0.32 -0.3
6 AT2G45240 methionine aminopeptidase 1A methionine aminopeptidase 1A -0.69 0.32 -0.33
7 AT3G58160 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATMYOS3, MYOSIN XI J, MYOSIN A3,
MYOSIN XI-16, XIJ		 0.68 0.31 -0.32
8 AT5G51880 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.68 0.32 -0.34
9 AT2G02050 NADH-ubiquinone oxidoreductase B18 subunit, putative -0.67 0.31 -0.32
10 AT1G43850 SEUSS transcriptional co-regulator seuss 0.67 0.31 -0.34
11 AT3G33530 Transducin family protein / WD-40 repeat family protein 0.67 0.32 -0.32
12 AT4G11010 nucleoside diphosphate kinase 3 nucleoside diphosphate kinase 3 -0.66 0.3 -0.32
13 AT3G02780 isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase 2		 ATISOPENTENYL DIPHOSPHE ISOMERASE
2, IPIAT1, isopentenyl
pyrophosphate:dimethylallyl
pyrophosphate isomerase 2		 -0.66 0.29 -0.33
14 AT3G20920 translocation protein-related -0.65 0.33 -0.32
15 AT3G53340 nuclear factor Y, subunit B10 nuclear factor Y, subunit B10 -0.65 0.3 -0.33
16 AT1G22060 LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: FBD, F-box and Leucine Rich
Repeat domains containing protein (TAIR:AT1G22000.1); Has
84739 Blast hits to 38714 proteins in 2257 species: Archae
- 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706;
Plants - 4675; Viruses - 308; Other Eukaryotes - 18553
(source: NCBI BLink).		 0.65 0.33 -0.3
17 AT3G21280 ubiquitin-specific protease 7 ubiquitin-specific protease 7 -0.64 0.31 -0.33
18 AT5G16470 zinc finger (C2H2 type) family protein -0.64 0.29 -0.33
19 AT2G47690 NADH-ubiquinone oxidoreductase-related -0.64 0.33 -0.32
20 AT3G25170 ralf-like 26 ralf-like 26 0.64 0.3 -0.32
21 AT2G34520 mitochondrial ribosomal protein S14 mitochondrial ribosomal protein
S14		 -0.64 0.31 -0.32
22 AT5G65930 kinesin-like calmodulin-binding protein (ZWICHEL) KINESIN-LIKE CALMODULIN-BINDING
PROTEIN, POTATO KINESIN-LIKE
CALMODULIN-BINDING PROTEIN,
ZWICHEL		 0.64 0.32 -0.32
23 AT5G17280 CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal
(InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.64 0.31 -0.3
24 AT5G27380 glutathione synthetase 2 glutathione synthetase 2, GSHB -0.64 0.31 -0.31
25 AT5G63150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1713, mitochondria
(InterPro:IPR013177); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.63 0.32 -0.32
26 AT1G05460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SILENCING DEFECTIVE 0.63 0.32 -0.32
27 AT4G34700 LYR family of Fe/S cluster biogenesis protein AtCIB22, B22 subunit of eukaryotic
mitochondrial Complex I		 -0.63 0.32 -0.32
28 AT5G50870 ubiquitin-conjugating enzyme 27 ubiquitin-conjugating enzyme 27 -0.63 0.31 -0.33
29 AT1G52600 Peptidase S24/S26A/S26B/S26C family protein -0.63 0.31 -0.32
30 AT1G27450 adenine phosphoribosyl transferase 1 adenine phosphoribosyl transferase
1, ARABIDOPSIS THALIANA ADENINE
PHOSPHORIBOSYLTRANSFERASE 1		 -0.63 0.32 -0.33
31 AT5G12190 RNA-binding (RRM/RBD/RNP motifs) family protein -0.63 0.32 -0.32
32 AT3G28480 Oxoglutarate/iron-dependent oxygenase -0.63 0.3 -0.29
33 AT1G15120 Ubiquinol-cytochrome C reductase hinge protein -0.63 0.33 -0.31
34 AT5G18420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2363
(InterPro:IPR019312); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.62 0.31 -0.33
35 AT1G73570 HCP-like superfamily protein 0.62 0.31 -0.3
36 AT3G05750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G26910.1); Has 2317
Blast hits to 1467 proteins in 247 species: Archae - 4;
Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180;
Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).		 0.62 0.34 -0.31
37 AT5G50460 secE/sec61-gamma protein transport protein -0.62 0.32 -0.3
38 AT4G29660 embryo defective 2752 EMBRYO DEFECTIVE 2752 -0.62 0.33 -0.31
39 AT5G47340 alpha/beta-Hydrolases superfamily protein 0.62 0.3 -0.34
40 AT1G14450 NADH dehydrogenase (ubiquinone)s -0.62 0.34 -0.32
41 AT2G46540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.32 -0.31
42 AT2G20820 unknown protein; Has 44 Blast hits to 44 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.32 -0.3
43 AT4G30996 Protein of unknown function (DUF1068) NA(+)- AND K(+)-SENSITIVE 1 -0.61 0.32 -0.31
44 AT5G39910 Pectin lyase-like superfamily protein 0.61 0.32 -0.3
45 AT2G33440 RNA-binding (RRM/RBD/RNP motifs) family protein 0.61 0.33 -0.31
46 AT1G72020 unknown protein; Has 52 Blast hits to 52 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.31 -0.33
47 AT5G64350 FK506-binding protein 12 ARABIDOPSIS THALIANA FK506-BINDING
PROTEIN 12, FK506-binding protein
12, FKP12		 -0.61 0.3 -0.32
48 AT1G04690 potassium channel beta subunit 1 potassium channel beta subunit 1,
KV-BETA1		 -0.61 0.32 -0.31
49 AT3G12630 A20/AN1-like zinc finger family protein stress associated protein 5 -0.61 0.3 -0.33
50 AT2G29090 cytochrome P450, family 707, subfamily A, polypeptide 2 cytochrome P450, family 707,
subfamily A, polypeptide 2		 0.6 0.29 -0.33
51 AT5G46470 disease resistance protein (TIR-NBS-LRR class) family RESISTANT TO P. SYRINGAE 6 0.6 0.31 -0.32
52 AT1G27435 unknown protein; Has 16 Blast hits to 16 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.34 -0.29
53 AT5G17560 BolA-like family protein -0.6 0.33 -0.32
54 AT1G68790 little nuclei3 CROWDED NUCLEI 3, LITTLE NUCLEI3 0.6 0.32 -0.32
55 AT4G12040 A20/AN1-like zinc finger family protein AtSAP7, stress-associated protein
7		 -0.6 0.31 -0.32
56 AT5G50930 Histone superfamily protein -0.6 0.32 -0.31
57 AT5G53560 cytochrome B5 isoform E ATB5-A, ARABIDOPSIS CYTOCHROME B5
ISOFORM E, B5 #2, cytochrome B5
isoform E		 -0.6 0.29 -0.3
58 AT3G06350 dehydroquinate dehydratase, putative / shikimate
dehydrogenase, putative		 EMBRYO DEFECTIVE 3004, MATERNAL
EFFECT EMBRYO ARREST 32		 -0.59 0.3 -0.32
59 AT1G66680 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 AR401 -0.59 0.31 -0.33
60 AT1G08600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATRX, CHR20 0.59 0.31 -0.33
61 AT1G55350 calpain-type cysteine protease family ATDEK1, DEFECTIVE KERNEL 1, embryo
defective 1275, EMBRYO DEFECTIVE
80		 0.59 0.33 -0.29
62 AT5G04520 Protein of unknown function DUF455 -0.59 0.31 -0.33
63 AT5G61070 histone deacetylase of the RPD3/HDA1 superfamily 18 A. THALIANA HISTONE DEACETYLASE OF
THE RPD3/HDA1 SUPERFAMILY 18,
histone deacetylase of the
RPD3/HDA1 superfamily 18		 0.59 0.31 -0.33
64 AT2G45790 phosphomannomutase PHOSPHOMANNOMUTASE,
phosphomannomutase		 -0.59 0.3 -0.33
65 AT5G46030 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF701, zinc-binding putative
(InterPro:IPR007808); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.58 0.3 -0.33
66 AT4G14420 HR-like lesion-inducing protein-related -0.58 0.35 -0.3
67 AT3G22890 ATP sulfurylase 1 ATP sulfurylase 1 -0.58 0.3 -0.33
68 AT3G52730 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family
protein		 -0.58 0.31 -0.32
69 AT2G34900 Transcription factor GTE6 GTE01, GLOBAL TRANSCRIPTION FACTOR
GROUP E1, IMBIBITION-INDUCIBLE 1		 -0.58 0.3 -0.29
70 AT4G00585 unknown protein; Has 47 Blast hits to 47 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7;
Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.58 0.32 -0.31
71 AT2G21870 copper ion binding;cobalt ion binding;zinc ion binding MALE GAMETOPHYTE DEFECTIVE 1 -0.58 0.31 -0.33
72 AT1G78895 Reticulon family protein -0.58 0.31 -0.31
73 AT1G54650 Methyltransferase family protein -0.58 0.31 -0.3
74 AT4G17510 ubiquitin C-terminal hydrolase 3 ubiquitin C-terminal hydrolase 3 -0.57 0.32 -0.3
75 AT3G23550 MATE efflux family protein -0.57 0.33 -0.33
76 AT2G47230 DOMAIN OF UNKNOWN FUNCTION 724 6 DOMAIN OF UNKNOWN FUNCTION 724 6,
DOMAIN OF UNKNOWN FUNCTION 724 6		 0.57 0.3 -0.31
77 AT4G13410 Nucleotide-diphospho-sugar transferases superfamily protein ATCSLA15, CELLULOSE SYNTHASE LIKE
A15		 -0.57 0.3 -0.33
78 AT5G20390 Glycosyl hydrolase superfamily protein 0.57 0.32 -0.34
79 AT1G62880 Cornichon family protein -0.57 0.31 -0.29
80 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 0.57 0.31 -0.31
81 AT5G19180 E1 C-terminal related 1 E1 C-terminal related 1 -0.57 0.31 -0.32
82 AT5G39250 F-box family protein -0.57 0.29 -0.32
83 AT1G67350 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.31 -0.31
84 AT1G21700 SWITCH/sucrose nonfermenting 3C SWITCH/sucrose nonfermenting 3C,
CHB4, SWITCH/sucrose nonfermenting
3C		 0.57 0.33 -0.32
85 AT2G42210 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-3, OEP16-3 -0.57 0.3 -0.3
86 AT2G27950 Ring/U-Box superfamily protein 0.56 0.32 -0.3
87 AT1G26470 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of transcription; LOCATED IN: nucleus, H4/H2A
histone acetyltransferase complex; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast
hits to 60 proteins in 27 species: Archae - 0; Bacteria -
0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.56 0.34 -0.33
88 AT2G24340 sequence-specific DNA binding transcription factors -0.56 0.31 -0.32
89 AT2G35630 ARM repeat superfamily protein GEM1, MICROTUBULE ORGANIZATION 1 0.56 0.32 -0.34
90 AT1G77570 Winged helix-turn-helix transcription repressor DNA-binding -0.56 0.31 -0.34
91 AT5G09650 pyrophosphorylase 6 pyrophosphorylase 6,
pyrophosphorylase 6		 -0.56 0.3 -0.33
92 AT2G31490 unknown protein; Has 55 Blast hits to 55 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.33 -0.33
93 AT5G51200 Protein of unknown function (DUF3414) EMBRYO DEFECTIVE 3142 0.56 0.31 -0.34
94 AT5G49555 FAD/NAD(P)-binding oxidoreductase family protein 0.56 0.31 -0.32
95 AT5G18370 Disease resistance protein (TIR-NBS-LRR class) family 0.56 0.3 -0.31
96 AT1G23820 spermidine synthase 1 spermidine synthase 1 -0.56 0.31 -0.31
97 AT1G44780 CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ
(InterPro:IPR019098); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G08310.1); Has 18105
Blast hits to 11200 proteins in 808 species: Archae - 37;
Bacteria - 1195; Metazoa - 7724; Fungi - 1727; Plants -
674; Viruses - 183; Other Eukaryotes - 6565 (source: NCBI
BLink).		 0.55 0.32 -0.33
98 AT3G13200 Cwf15 / Cwc15 cell cycle control family protein EMBRYO DEFECTIVE 2769 -0.55 0.3 -0.32
99 AT5G19840 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.55 0.32 -0.32
100 AT4G35000 ascorbate peroxidase 3 ascorbate peroxidase 3 -0.55 0.3 -0.31
101 AT5G66510 gamma carbonic anhydrase 3 gamma carbonic anhydrase 3 -0.55 0.35 -0.3
102 AT3G01390 vacuolar membrane ATPase 10 AVMA10, vacuolar membrane ATPase
10		 -0.55 0.32 -0.31
103 AT4G10510 Subtilase family protein 0.53 0.3 -0.33
104 AT2G28560 DNA repair (Rad51) family protein ATRAD51B, RAD51B 0.53 0.31 -0.32
105 AT2G11370 transposable element gene 0.53 0.31 -0.32
106 AT3G11740 Protein of unknown function (DUF567) 0.53 0.32 -0.32
107 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding 0.53 0.3 -0.33
108 AT3G56590 hydroxyproline-rich glycoprotein family protein 0.52 0.31 -0.3
109 AT5G01890 Leucine-rich receptor-like protein kinase family protein 0.51 0.31 -0.33
110 AT3G28360 P-glycoprotein 16 ATP-binding cassette B16,
P-glycoprotein 16		 0.51 0.31 -0.33
111 AT3G07520 glutamate receptor 1.4 ATGLR1.4, glutamate receptor 1.4 0.51 0.32 -0.35
112 AT3G26010 Galactose oxidase/kelch repeat superfamily protein 0.51 0.32 -0.32
113 AT1G80010 FAR1-related sequence 8 FAR1-related sequence 8 0.51 0.31 -0.31
114 AT4G08670 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.51 0.29 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
115 C0266 Xylose D-Xylose D-Xylose xylose degradation I 0.74 0.46 -0.47 C0266
116 C0185 MST_3139.9 - - - -0.67 0.45 -0.43