AT2G23900 : -
Query Information
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AGICode AT2G23900
Description Pectin lyase-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G23900 Pectin lyase-like superfamily protein 1 0.3 -0.31
2 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.71 0.3 -0.3
3 AT2G47150 NAD(P)-binding Rossmann-fold superfamily protein -0.69 0.32 -0.32
4 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 -0.69 0.3 -0.32
5 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 -0.68 0.3 -0.29
6 AT5G61140 U5 small nuclear ribonucleoprotein helicase -0.67 0.33 -0.29
7 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.31 -0.33
8 AT5G13280 aspartate kinase 1 ASPARTATE KINASE, aspartate kinase
1, ASPARTATE KINASE 1		 -0.65 0.34 -0.32
9 AT1G56690 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.31 -0.34
10 AT2G23480 transposable element gene 0.65 0.35 -0.3
11 AT5G59590 UDP-glucosyl transferase 76E2 UDP-glucosyl transferase 76E2 -0.64 0.33 -0.31
12 AT5G11290 Plant protein of unknown function (DUF247) -0.64 0.32 -0.32
13 AT4G22430 F-box family protein 0.63 0.31 -0.31
14 AT3G25840 Protein kinase superfamily protein -0.63 0.32 -0.3
15 AT3G02270 Trimeric LpxA-like enzyme 0.63 0.3 -0.31
16 AT5G54050 Cysteine/Histidine-rich C1 domain family protein 0.63 0.32 -0.32
17 AT2G18190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.3 -0.34
18 AT5G15020 SIN3-like 2 SIN3-like 2 -0.62 0.32 -0.33
19 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.31 -0.29
20 AT3G55160 unknown protein; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2428, death-receptor-like
(InterPro:IPR019442); Has 357 Blast hits to 330 proteins in
163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi
- 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45
(source: NCBI BLink).		 -0.61 0.3 -0.3
21 AT5G54570 beta glucosidase 41 beta glucosidase 41 0.61 0.32 -0.32
22 AT4G13780 methionine--tRNA ligase, putative / methionyl-tRNA
synthetase, putative / MetRS, putative		 -0.61 0.28 -0.31
23 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 -0.61 0.31 -0.31
24 AT2G32510 mitogen-activated protein kinase kinase kinase 17 mitogen-activated protein kinase
kinase kinase 17		 0.61 0.33 -0.31
25 AT2G22180 hydroxyproline-rich glycoprotein family protein 0.6 0.29 -0.33
26 AT5G26120 alpha-L-arabinofuranosidase 2 alpha-L-arabinofuranosidase 2,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 2		 0.6 0.33 -0.31
27 AT1G03280 Transcription factor TFIIE, alpha subunit -0.6 0.31 -0.33
28 AT2G24950 Protein of Unknown Function (DUF239) 0.6 0.3 -0.29
29 AT5G13560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast
hits to 8846 proteins in 811 species: Archae - 217;
Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants -
528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI
BLink).		 -0.59 0.32 -0.33
30 AT3G28280 BEST Arabidopsis thaliana protein match is: F-box family
protein-related (TAIR:AT3G28330.1); Has 103 Blast hits to
100 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.3 -0.31
31 AT2G25760 Protein kinase family protein -0.59 0.33 -0.32
32 AT5G35700 fimbrin-like protein 2 fimbrin-like protein 2, FIMBRIN5 -0.59 0.33 -0.31
33 AT2G20620 Protein of unknown function (DUF626) 0.59 0.3 -0.33
34 AT3G51520 diacylglycerol acyltransferase family 0.59 0.3 -0.33
35 AT1G31910 GHMP kinase family protein -0.59 0.34 -0.31
36 AT1G32850 ubiquitin-specific protease 11 ubiquitin-specific protease 11 -0.59 0.3 -0.33
37 AT5G57320 villin, putative villin 5 -0.59 0.32 -0.3
38 AT1G61070 low-molecular-weight cysteine-rich 66 low-molecular-weight cysteine-rich
66, PLANT DEFENSIN 2.4		 0.59 0.3 -0.31
39 AT3G16730 CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex,
subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to
211 proteins in 82 species: Archae - 0; Bacteria - 0;
Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 hypersensitive to excess boron 2 0.59 0.32 -0.31
40 AT5G15700 DNA/RNA polymerases superfamily protein -0.58 0.33 -0.3
41 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.58 0.31 -0.32
42 AT4G29000 Tesmin/TSO1-like CXC domain-containing protein 0.58 0.3 -0.32
43 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein -0.58 0.3 -0.32
44 AT4G16447 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.31 -0.34
45 AT4G15200 formin 3 formin 3, formin 3 0.58 0.32 -0.33
46 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.31 -0.32
47 AT1G36150 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.58 0.32 -0.32
48 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein 0.58 0.32 -0.29
49 AT5G62420 NAD(P)-linked oxidoreductase superfamily protein 0.58 0.32 -0.32
50 AT2G02380 glutathione S-transferase (class zeta) 2 glutathione S-transferase (class
zeta) 2, glutathione S-transferase
(class zeta) 2		 -0.58 0.33 -0.32
51 AT2G18960 H(+)-ATPase 1 H(+)-ATPase 1, H(+)-ATPase 1, OPEN
STOMATA 2, PLASMA MEMBRANE PROTON
ATPASE		 -0.58 0.31 -0.29
52 AT2G35740 nositol transporter 3 NOSITOL TRANSPORTER 3, nositol
transporter 3		 0.58 0.33 -0.28
53 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.57 0.31 -0.35
54 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 -0.57 0.35 -0.31
55 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24		 0.57 0.34 -0.31
56 AT5G45180 Flavin-binding monooxygenase family protein -0.57 0.31 -0.29
57 AT4G32700 helicases;ATP-dependent helicases;nucleic acid binding;ATP
binding;DNA-directed DNA polymerases;DNA binding		 TEBICHI -0.57 0.32 -0.33
58 AT2G48160 Tudor/PWWP/MBT domain-containing protein -0.57 0.32 -0.34
59 AT3G21400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; Has 29 Blast hits to 29 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants -
27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.31 -0.31
60 AT1G43900 Protein phosphatase 2C family protein -0.57 0.33 -0.32
61 AT5G24280 gamma-irradiation and mitomycin c induced 1 GAMMA-IRRADIATION AND MITOMYCIN C
INDUCED 1		 -0.57 0.32 -0.31
62 AT4G29610 Cytidine/deoxycytidylate deaminase family protein 0.57 0.32 -0.33
63 AT3G18480 CCAAT-displacement protein alternatively spliced product CCAAT-displacement protein
alternatively spliced product,
CCAAT-displacement protein
alternatively spliced product		 -0.57 0.32 -0.3
64 AT2G02515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: central cell, embryo;
EXPRESSED DURING: C globular stage; Has 18 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.32 -0.33
65 AT3G18170 Glycosyltransferase family 61 protein 0.57 0.33 -0.33
66 AT3G24650 AP2/B3-like transcriptional factor family protein ABA INSENSITIVE 3, ABSCISIC ACID
INSENSITIVE 3, SUGAR INSENSITIVE
10		 -0.56 0.32 -0.29
67 AT5G08100 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 asparaginase A1 0.56 0.31 -0.32
68 AT5G58270 ABC transporter of the mitochondrion 3 ATP-binding cassette B25,
ARABIDOPSIS THALIANA ABC
TRANSPORTER OF THE MITOCHONDRION
3, ABC transporter of the
mitochondrion 3, STARIK 1		 -0.56 0.31 -0.32
69 AT2G38130 Acyl-CoA N-acyltransferases (NAT) superfamily protein ATMAK3 -0.56 0.32 -0.32
70 AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein -0.56 0.3 -0.31
71 AT5G47280 ADR1-like 3 ADR1-like 3 -0.56 0.32 -0.32
72 AT2G22950 Cation transporter/ E1-E2 ATPase family protein auto-regulated Ca2+-ATPase 7 0.56 0.3 -0.32
73 AT1G09170 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 0.55 0.29 -0.32
74 AT1G26110 decapping 5 decapping 5 -0.55 0.3 -0.31
75 AT1G42480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF3456
(InterPro:IPR021852); Has 177 Blast hits to 177 proteins in
59 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi
- 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink).		 -0.55 0.31 -0.33
76 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 -0.55 0.3 -0.34
77 AT1G22620 Phosphoinositide phosphatase family protein suppressor of actin 1 -0.55 0.3 -0.33
78 AT3G17620 F-box and associated interaction domains-containing protein 0.55 0.32 -0.31
79 AT4G14550 indole-3-acetic acid inducible 14 indole-3-acetic acid inducible 14,
SOLITARY ROOT		 0.55 0.32 -0.3
80 AT1G72960 Root hair defective 3 GTP-binding protein (RHD3) 0.55 0.31 -0.32
81 AT1G49250 ATP-dependent DNA ligase -0.55 0.3 -0.3
82 AT5G28170 transposable element gene -0.55 0.32 -0.3
83 AT5G57940 cyclic nucleotide gated channel 5 cyclic nucleotide gated channel 5,
cyclic nucleotide gated channel 5		 -0.55 0.33 -0.34
84 AT1G05770 Mannose-binding lectin superfamily protein 0.55 0.33 -0.32
85 AT5G15070 Phosphoglycerate mutase-like family protein -0.55 0.3 -0.3
86 AT3G30230 myosin heavy chain-related 0.55 0.3 -0.32
87 AT4G27220 NB-ARC domain-containing disease resistance protein -0.55 0.33 -0.33
88 AT1G66470 ROOT HAIR DEFECTIVE6 AtRHD6, ROOT HAIR DEFECTIVE6 0.54 0.28 -0.32
89 AT5G37590 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.31 -0.31
90 AT4G13230 Late embryogenesis abundant protein (LEA) family protein 0.54 0.3 -0.33
91 AT2G24000 serine carboxypeptidase-like 22 serine carboxypeptidase-like 22 0.54 0.31 -0.33
92 AT1G26860 transposable element gene 0.54 0.32 -0.28
93 AT1G50530 BEST Arabidopsis thaliana protein match is:
Calcium-dependent lipid-binding (CaLB domain) family
protein (TAIR:AT1G50570.2); Has 10 Blast hits to 10
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.54 0.31 -0.33
94 AT5G61150 leo1-like family protein VERNALIZATION INDEPENDENCE 4 -0.54 0.31 -0.35
95 AT4G04120 transposable element gene 0.54 0.31 -0.29
96 AT2G01780 Curculin-like (mannose-binding) lectin family protein 0.54 0.32 -0.31
97 AT4G36105 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.54 0.29 -0.33
98 AT1G53810 transposable element gene 0.54 0.33 -0.34
99 AT2G30680 BEST Arabidopsis thaliana protein match is: glucan
synthase-like 3 (TAIR:AT2G31960.2); Has 80 Blast hits to 80
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.53 0.33 -0.3
100 AT4G11050 glycosyl hydrolase 9C3 glycosyl hydrolase 9C3, glycosyl
hydrolase 9C3		 0.53 0.35 -0.32
101 AT1G35490 bZIP family transcription factor 0.52 0.33 -0.31
102 AT2G21990 Protein of unknown function, DUF617 0.52 0.32 -0.33
103 AT5G22590 Leucine Rich Repeat protein family 0.52 0.32 -0.31
104 AT3G21830 SKP1-like 8 SKP1-like 8, SKP1-like 8 0.52 0.33 -0.32
105 AT1G55660 FBD, F-box and Leucine Rich Repeat domains containing
protein		 0.52 0.32 -0.3
106 AT4G39410 WRKY DNA-binding protein 13 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 13, WRKY
DNA-binding protein 13		 0.52 0.31 -0.31
107 AT4G00770 unknown protein; Has 127 Blast hits to 120 proteins in 33
species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8;
Plants - 62; Viruses - 3; Other Eukaryotes - 46 (source:
NCBI BLink).		 0.52 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
108 C0124 Isonicotinic acid - - - -0.7 0.44 -0.42