AT2G46180 : golgin candidate 4
Query Information
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AGICode AT2G46180
Description golgin candidate 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G46180 golgin candidate 4 golgin candidate 4 1 0.33 -0.31
2 AT1G14830 DYNAMIN-like 1C DYNAMIN-like 1C, ARABIDOPSIS
DYNAMIN-LIKE PROTEIN 5,
DYNAMIN-like 1C, DYNAMIN RELATED
PROTEIN 1C		 -0.71 0.31 -0.3
3 AT5G63080 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.69 0.31 -0.3
4 AT1G27390 translocase outer membrane 20-2 translocase outer membrane 20-2 -0.67 0.32 -0.3
5 AT1G71400 receptor like protein 12 receptor like protein 12, receptor
like protein 12		 -0.67 0.31 -0.33
6 AT3G01320 SIN3-like 1 SIN3-like 1 0.67 0.34 -0.33
7 AT1G24735 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.67 0.31 -0.31
8 AT3G51010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.67 0.3 -0.29
9 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 0.66 0.32 -0.32
10 AT2G15810 transposable element gene 0.66 0.32 -0.31
11 AT3G55730 myb domain protein 109 myb domain protein 109, myb domain
protein 109		 -0.66 0.29 -0.32
12 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 -0.66 0.3 -0.3
13 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid -0.66 0.31 -0.29
14 AT5G39910 Pectin lyase-like superfamily protein 0.65 0.32 -0.33
15 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 -0.65 0.31 -0.31
16 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.3 -0.31
17 AT1G49410 translocase of the outer mitochondrial membrane 6 translocase of the outer
mitochondrial membrane 6		 -0.65 0.31 -0.35
18 AT4G39390 nucleotide sugar transporter-KT 1 A. THALIANA NUCLEOTIDE SUGAR
TRANSPORTER-KT 1, nucleotide sugar
transporter-KT 1		 -0.65 0.31 -0.33
19 AT3G16480 mitochondrial processing peptidase alpha subunit mitochondrial processing peptidase
alpha subunit		 -0.65 0.3 -0.32
20 AT3G08020 PHD finger family protein 0.65 0.32 -0.32
21 AT5G35260 transposable element gene 0.65 0.3 -0.31
22 AT3G05150 Major facilitator superfamily protein -0.64 0.32 -0.32
23 AT4G35850 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.29 -0.29
24 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.3 -0.29
25 AT5G49210 unknown protein; Has 3675 Blast hits to 2315 proteins in
312 species: Archae - 2; Bacteria - 342; Metazoa - 1190;
Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes -
1742 (source: NCBI BLink).		 -0.64 0.32 -0.31
26 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 -0.64 0.31 -0.31
27 AT1G16870 mitochondrial 28S ribosomal protein S29-related -0.63 0.32 -0.3
28 AT1G26580 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: ELM2 domain-containing protein
(TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.31 -0.3
29 AT2G20060 Ribosomal protein L4/L1 family -0.63 0.34 -0.34
30 AT5G52460 FBD, F-box and Leucine Rich Repeat domains containing
protein		 embryo sac development arrest 41 0.63 0.31 -0.31
31 AT4G32840 phosphofructokinase 6 phosphofructokinase 6 -0.63 0.29 -0.34
32 AT5G06360 Ribosomal protein S8e family protein -0.63 0.32 -0.3
33 AT2G20780 Major facilitator superfamily protein -0.63 0.31 -0.28
34 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 -0.63 0.31 -0.31
35 AT2G02470 alfin-like 6 alfin-like 6 -0.63 0.33 -0.32
36 AT4G22720 Actin-like ATPase superfamily protein -0.63 0.32 -0.3
37 AT4G20020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast
hits to 16023 proteins in 1033 species: Archae - 4;
Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants -
3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI
BLink).		 -0.63 0.33 -0.33
38 AT1G07615 GTP-binding protein Obg/CgtA -0.62 0.31 -0.33
39 AT5G60290 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.62 0.31 -0.34
40 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.62 0.32 -0.32
41 AT3G12030 Protein of unknown function DUF106, transmembrane -0.62 0.33 -0.32
42 AT3G14600 Ribosomal protein L18ae/LX family protein -0.61 0.34 -0.32
43 AT3G15640 Rubredoxin-like superfamily protein -0.61 0.29 -0.32
44 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 0.61 0.3 -0.31
45 AT3G20000 translocase of the outer mitochondrial membrane 40 translocase of the outer
mitochondrial membrane 40		 -0.61 0.31 -0.3
46 AT3G07950 rhomboid protein-related -0.61 0.34 -0.3
47 AT2G33845 Nucleic acid-binding, OB-fold-like protein -0.61 0.32 -0.29
48 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein		 -0.61 0.33 -0.31
49 AT5G42860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G45688.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.31 -0.3
50 AT5G08160 serine/threonine protein kinase 3 serine/threonine protein kinase 3,
serine/threonine protein kinase 3		 -0.61 0.31 -0.3
51 AT4G24830 arginosuccinate synthase family -0.61 0.31 -0.31
52 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 0.61 0.31 -0.33
53 AT5G06210 RNA binding (RRM/RBD/RNP motifs) family protein -0.61 0.3 -0.32
54 AT3G02320 N2,N2-dimethylguanosine tRNA methyltransferase -0.6 0.32 -0.29
55 AT1G07020 unknown protein; Has 39 Blast hits to 39 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 3;
Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.6 0.31 -0.29
56 AT3G63270 CONTAINS InterPro DOMAIN/s: Putative harbinger
transposase-derived nuclease (InterPro:IPR006912); BEST
Arabidopsis thaliana protein match is: PIF / Ping-Pong
family of plant transposases (TAIR:AT3G55350.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.6 0.31 -0.33
57 AT3G50110 PTEN 3 Arabidopsis thaliana phosphatase
and TENsin homolog deleted on
chromosome ten 3, PTEN 3,
phosphatase and TENsin homolog
deleted on chromosome ten 2B		 -0.6 0.31 -0.31
58 AT5G59670 Leucine-rich repeat protein kinase family protein 0.6 0.3 -0.31
59 AT5G14030 translocon-associated protein beta (TRAPB) family protein -0.6 0.32 -0.31
60 AT2G21160 Translocon-associated protein (TRAP), alpha subunit -0.6 0.32 -0.3
61 AT5G20820 SAUR-like auxin-responsive protein family -0.6 0.32 -0.31
62 AT3G12700 Eukaryotic aspartyl protease family protein -0.6 0.32 -0.33
63 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11		 -0.6 0.3 -0.33
64 AT2G17630 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.6 0.31 -0.3
65 AT3G50430 unknown protein; Has 54 Blast hits to 54 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.59 0.36 -0.32
66 AT1G26130 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.59 0.31 -0.31
67 AT5G14070 Thioredoxin superfamily protein ROXY2 -0.59 0.32 -0.32
68 AT1G79900 Mitochondrial substrate carrier family protein RABIDOPSIS MITOCHONDRIAL BASIC
AMINO ACID CARRIER 2, BAC2		 0.59 0.3 -0.32
69 AT3G17920 Outer arm dynein light chain 1 protein 0.59 0.31 -0.31
70 AT1G07210 Ribosomal protein S18 -0.59 0.3 -0.32
71 AT2G41210 phosphatidylinositol- 4-phosphate 5-kinase 5 phosphatidylinositol- 4-phosphate
5-kinase 5		 0.58 0.31 -0.3
72 AT2G17120 lysm domain GPI-anchored protein 2 precursor lysm domain GPI-anchored protein 2
precursor		 0.58 0.31 -0.32
73 AT2G32810 beta galactosidase 9 beta galactosidase 9,
beta-galactosidase 9		 0.58 0.29 -0.31
74 AT1G19835 Plant protein of unknown function (DUF869) 0.58 0.34 -0.29
75 AT1G34120 inositol polyphosphate 5-phosphatase I AT5P1, MYO-INOSITOL POLYPHOSPHATE
5-PHOSPHATASE 1, ATIP5PI, inositol
polyphosphate 5-phosphatase I		 0.58 0.33 -0.32
76 AT2G18590 Major facilitator superfamily protein 0.58 0.31 -0.31
77 AT1G22310 methyl-CPG-binding domain 8 ATMBD8, methyl-CPG-binding domain
8		 0.57 0.3 -0.29
78 AT5G58830 Subtilisin-like serine endopeptidase family protein 0.56 0.33 -0.32
79 AT2G18280 tubby like protein 2 tubby like protein 2, tubby like
protein 2		 0.55 0.31 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
80 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		0.76 0.45 -0.45 C0109
81 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		0.75 0.45 -0.42 C0123
82 C0266 Xylose D-Xylose D-Xylose xylose degradation I 0.75 0.44 -0.46 C0266
83 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		0.7 0.45 -0.45 C0107
84 C0137 Leucine L-Leucine L-Leucine indole-3-acetyl-amino acid biosynthesis,
leucine biosynthesis,
jasmonoyl-amino acid conjugates biosynthesis I,
IAA biosynthesis II,
tRNA charging,
leucine degradation I 		0.62 0.33 -0.33 C0137