AGICode | AT2G46150 |
Description | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G46150 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
1 | 0.31 | -0.31 | |||
2 | AT4G13180 | NAD(P)-binding Rossmann-fold superfamily protein | 0.86 | 0.34 | -0.31 | |||
3 | AT1G14130 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.84 | 0.33 | -0.32 | |||
4 | AT2G36870 | xyloglucan endotransglucosylase/hydrolase 32 | xyloglucan endotransglucosylase/hydrolase 32 |
-0.81 | 0.33 | -0.34 | ||
5 | AT5G64250 | Aldolase-type TIM barrel family protein | 0.81 | 0.32 | -0.33 | |||
6 | AT5G03140 | Concanavalin A-like lectin protein kinase family protein | -0.8 | 0.32 | -0.28 | |||
7 | AT5G66330 | Leucine-rich repeat (LRR) family protein | -0.8 | 0.31 | -0.3 | |||
8 | AT1G35260 | MLP-like protein 165 | MLP-like protein 165 | 0.79 | 0.31 | -0.33 | ||
9 | AT1G68620 | alpha/beta-Hydrolases superfamily protein | 0.79 | 0.31 | -0.3 | |||
10 | AT3G62920 | unknown protein; Has 25 Blast hits to 25 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.78 | 0.34 | -0.32 | |||
11 | AT3G05600 | alpha/beta-Hydrolases superfamily protein | -0.78 | 0.35 | -0.31 | |||
12 | AT3G56330 | N2,N2-dimethylguanosine tRNA methyltransferase | -0.78 | 0.31 | -0.32 | |||
13 | AT3G14990 | Class I glutamine amidotransferase-like superfamily protein | DJ-1 homolog A, DJ-1 homolog A | 0.78 | 0.32 | -0.33 | ||
14 | AT3G09210 | plastid transcriptionally active 13 | plastid transcriptionally active 13 |
-0.78 | 0.33 | -0.31 | ||
15 | AT5G23580 | calmodulin-like domain protein kinase 9 | ARABIDOPSIS THALIANA CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9, ATCPK12, calmodulin-like domain protein kinase 9, CALCIUM-DEPENDENT PROTEIN KINASE 12 |
0.77 | 0.31 | -0.34 | ||
16 | AT3G09270 | glutathione S-transferase TAU 8 | glutathione S-transferase TAU 8, glutathione S-transferase TAU 8 |
0.77 | 0.32 | -0.3 | ||
17 | AT2G38170 | cation exchanger 1 | ATCAX1, cation exchanger 1, RARE COLD INDUCIBLE 4 |
-0.77 | 0.32 | -0.33 | ||
18 | AT5G11590 | Integrase-type DNA-binding superfamily protein | TINY2 | -0.77 | 0.31 | -0.32 | ||
19 | AT3G26950 | unknown protein; Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.76 | 0.31 | -0.3 | |||
20 | AT4G29210 | gamma-glutamyl transpeptidase 4 | gamma-glutamyl transpeptidase 3, gamma-glutamyl transpeptidase 4 |
0.76 | 0.34 | -0.32 | ||
21 | AT3G56910 | plastid-specific 50S ribosomal protein 5 | plastid-specific 50S ribosomal protein 5 |
-0.76 | 0.35 | -0.33 | ||
22 | AT3G04260 | plastid transcriptionally active 3 | PIGMENT DEFECTIVE 324, plastid transcriptionally active 3 |
-0.76 | 0.31 | -0.33 | ||
23 | AT3G52840 | beta-galactosidase 2 | beta-galactosidase 2 | -0.76 | 0.3 | -0.31 | ||
24 | AT4G20360 | RAB GTPase homolog E1B | ATRAB8D, RAB GTPase homolog E1B, RAB GTPase homolog E1B |
-0.76 | 0.3 | -0.31 | ||
25 | AT1G12090 | extensin-like protein | extensin-like protein | -0.76 | 0.32 | -0.32 | ||
26 | AT1G02280 | translocon at the outer envelope membrane of chloroplasts 33 |
ATTOC33, PLASTID PROTEIN IMPORT 1, translocon at the outer envelope membrane of chloroplasts 33 |
-0.76 | 0.3 | -0.32 | ||
27 | AT2G15490 | UDP-glycosyltransferase 73B4 | UDP-glycosyltransferase 73B4 | 0.76 | 0.32 | -0.3 | ||
28 | AT2G17500 | Auxin efflux carrier family protein | 0.75 | 0.3 | -0.31 | |||
29 | AT3G26710 | cofactor assembly of complex C | cofactor assembly of complex C | -0.75 | 0.34 | -0.34 | ||
30 | AT2G20890 | photosystem II reaction center PSB29 protein | photosystem II reaction center PSB29 protein, THYLAKOID FORMATION1 |
-0.75 | 0.32 | -0.33 | ||
31 | AT2G29490 | glutathione S-transferase TAU 1 | glutathione S-transferase TAU 1, GLUTATHIONE S-TRANSFERASE 19, glutathione S-transferase TAU 1 |
0.75 | 0.31 | -0.34 | ||
32 | AT2G43030 | Ribosomal protein L3 family protein | -0.75 | 0.32 | -0.32 | |||
33 | AT2G24090 | Ribosomal protein L35 | -0.75 | 0.31 | -0.32 | |||
34 | AT1G51570 | Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein |
-0.75 | 0.31 | -0.31 | |||
35 | AT5G49330 | myb domain protein 111 | ARABIDOPSIS MYB DOMAIN PROTEIN 111, myb domain protein 111, PRODUCTION OF FLAVONOL GLYCOSIDES 3 |
-0.75 | 0.3 | -0.31 | ||
36 | AT3G25290 | Auxin-responsive family protein | 0.75 | 0.32 | -0.32 | |||
37 | AT5G51110 | Transcriptional coactivator/pterin dehydratase | -0.74 | 0.3 | -0.31 | |||
38 | AT5G11790 | N-MYC downregulated-like 2 | N-MYC downregulated-like 2 | -0.74 | 0.31 | -0.3 | ||
39 | AT3G57780 | BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3163 Blast hits to 2460 proteins in 357 species: Archae - 16; Bacteria - 291; Metazoa - 841; Fungi - 335; Plants - 248; Viruses - 72; Other Eukaryotes - 1360 (source: NCBI BLink). |
-0.74 | 0.3 | -0.31 | |||
40 | AT1G15690 | Inorganic H pyrophosphatase family protein | ARABIDOPSIS THALIANA V-PPASE 3, AtVHP1;1, AVP-3, AVP1, FUGU 5 |
-0.74 | 0.31 | -0.33 | ||
41 | AT3G52380 | chloroplast RNA-binding protein 33 | chloroplast RNA-binding protein 33, PIGMENT DEFECTIVE 322 |
-0.74 | 0.35 | -0.31 | ||
42 | AT4G34620 | small subunit ribosomal protein 16 | small subunit ribosomal protein 16 | -0.74 | 0.33 | -0.32 | ||
43 | AT2G38140 | plastid-specific ribosomal protein 4 | plastid-specific ribosomal protein 4 |
-0.74 | 0.32 | -0.32 | ||
44 | AT5G08000 | glucan endo-1,3-beta-glucosidase-like protein 3 | glucan endo-1,3-beta-glucosidase-like protein 3, PLASMODESMATA CALLOSE-BINDING PROTEIN 2 |
-0.74 | 0.32 | -0.32 | ||
45 | AT5G63050 | embryo defective 2759 | embryo defective 2759 | -0.74 | 0.33 | -0.33 | ||
46 | AT3G20820 | Leucine-rich repeat (LRR) family protein | -0.74 | 0.32 | -0.31 | |||
47 | AT3G28740 | Cytochrome P450 superfamily protein | cytochrome P450, family 81, subfamily D, polypeptide 11 |
0.74 | 0.29 | -0.32 | ||
48 | AT5G52970 | thylakoid lumen 15.0 kDa protein | -0.74 | 0.32 | -0.33 | |||
49 | AT3G52770 | protein binding | LITTLE ZIPPER 3 | 0.74 | 0.33 | -0.29 | ||
50 | AT3G44890 | ribosomal protein L9 | ribosomal protein L9 | -0.74 | 0.32 | -0.3 | ||
51 | AT1G70530 | cysteine-rich RLK (RECEPTOR-like protein kinase) 3 | cysteine-rich RLK (RECEPTOR-like protein kinase) 3 |
0.74 | 0.31 | -0.34 | ||
52 | AT5G58250 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2488 (InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
EMBRYO DEFECTIVE 3143 | -0.73 | 0.32 | -0.31 | ||
53 | AT4G17600 | Chlorophyll A-B binding family protein | LIL3:1 | -0.73 | 0.3 | -0.31 | ||
54 | AT4G36360 | beta-galactosidase 3 | beta-galactosidase 3 | -0.73 | 0.28 | -0.33 | ||
55 | AT2G26300 | G protein alpha subunit 1 | ARABIDOPSIS THALIANA G PROTEIN ALPHA SUBUNIT 1, G protein alpha subunit 1, G PROTEIN ALPHA SUBUNIT 1 |
0.73 | 0.3 | -0.3 | ||
56 | AT3G22960 | Pyruvate kinase family protein | PKP-ALPHA, PLASTIDIAL PYRUVATE KINASE 1 |
-0.73 | 0.33 | -0.31 | ||
57 | AT3G55250 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
PIGMENT DEFECTIVE 329 | -0.73 | 0.32 | -0.33 | ||
58 | AT2G40490 | Uroporphyrinogen decarboxylase | HEME2 | -0.73 | 0.33 | -0.3 | ||
59 | AT2G33180 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
-0.73 | 0.31 | -0.32 | |||
60 | AT3G04290 | Li-tolerant lipase 1 | ATLTL1, Li-tolerant lipase 1 | -0.73 | 0.34 | -0.34 | ||
61 | AT4G01050 | thylakoid rhodanese-like | thylakoid rhodanese-like | -0.73 | 0.31 | -0.32 | ||
62 | AT5G46580 | pentatricopeptide (PPR) repeat-containing protein | -0.73 | 0.31 | -0.32 | |||
63 | AT3G53480 | pleiotropic drug resistance 9 | ATP-binding cassette G37, PLEIOTROPIC DRUG RESISTANCE 9, pleiotropic drug resistance 9, polar auxin transport inhibitor sensitive 1 |
0.73 | 0.3 | -0.32 | ||
64 | AT4G16390 | pentatricopeptide (PPR) repeat-containing protein | suppressor of variegation 7 | -0.72 | 0.32 | -0.32 | ||
65 | AT1G22800 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.71 | 0.33 | -0.33 | |||
66 | AT5G10820 | Major facilitator superfamily protein | 0.71 | 0.33 | -0.33 | |||
67 | AT1G51420 | sucrose-phosphatase 1 | SUCROSE-PHOSPHATASE 1, sucrose-phosphatase 1 |
0.71 | 0.32 | -0.33 | ||
68 | AT3G02250 | O-fucosyltransferase family protein | -0.71 | 0.34 | -0.33 | |||
69 | AT1G76790 | O-methyltransferase family protein | indole glucosinolate O-methyltransferase 5 |
0.71 | 0.31 | -0.3 | ||
70 | AT4G26370 | antitermination NusB domain-containing protein | -0.71 | 0.31 | -0.31 | |||
71 | AT5G24090 | chitinase A | chitinase A, chitinase A | 0.71 | 0.33 | -0.3 | ||
72 | AT2G41980 | Protein with RING/U-box and TRAF-like domains | -0.71 | 0.34 | -0.32 | |||
73 | AT5G08280 | hydroxymethylbilane synthase | hydroxymethylbilane synthase | -0.71 | 0.31 | -0.3 | ||
74 | AT2G42880 | MAP kinase 20 | MAP kinase 20, MAP kinase 20 | -0.71 | 0.31 | -0.32 | ||
75 | AT1G29070 | Ribosomal protein L34 | -0.71 | 0.33 | -0.34 | |||
76 | AT2G29480 | glutathione S-transferase tau 2 | glutathione S-transferase tau 2, GLUTATHIONE S-TRANSFERASE 20, glutathione S-transferase tau 2 |
0.71 | 0.31 | -0.34 | ||
77 | AT3G49220 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.71 | 0.33 | -0.3 | |||
78 | AT5G55580 | Mitochondrial transcription termination factor family protein |
-0.71 | 0.31 | -0.33 | |||
79 | AT4G01970 | stachyose synthase | stachyose synthase, raffinose synthase 4, stachyose synthase |
-0.71 | 0.31 | -0.28 | ||
80 | AT3G52150 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.71 | 0.31 | -0.31 | |||
81 | AT5G62210 | Embryo-specific protein 3, (ATS3) | -0.7 | 0.35 | -0.29 | |||
82 | AT3G54210 | Ribosomal protein L17 family protein | -0.7 | 0.3 | -0.33 | |||
83 | AT5G14910 | Heavy metal transport/detoxification superfamily protein | -0.7 | 0.31 | -0.33 | |||
84 | AT1G26730 | EXS (ERD1/XPR1/SYG1) family protein | 0.7 | 0.31 | -0.29 | |||
85 | AT5G65220 | Ribosomal L29 family protein | -0.7 | 0.3 | -0.3 | |||
86 | AT2G03050 | Mitochondrial transcription termination factor family protein |
EMBRYO DEFECTIVE 93, SINGLET OXYGEN-LINKED DEATH ACTIVATOR 10 |
-0.7 | 0.3 | -0.32 | ||
87 | AT1G27940 | P-glycoprotein 13 | ATP-binding cassette B13, P-glycoprotein 13 |
-0.7 | 0.29 | -0.31 | ||
88 | AT3G18390 | CRS1 / YhbY (CRM) domain-containing protein | embryo defective 1865 | -0.7 | 0.33 | -0.32 | ||
89 | AT3G25920 | ribosomal protein L15 | ribosomal protein L15 | -0.7 | 0.32 | -0.32 | ||
90 | AT3G48730 | glutamate-1-semialdehyde 2,1-aminomutase 2 | glutamate-1-semialdehyde 2,1-aminomutase 2 |
-0.7 | 0.3 | -0.32 | ||
91 | AT4G11175 | Nucleic acid-binding, OB-fold-like protein | -0.7 | 0.31 | -0.35 | |||
92 | AT1G78630 | Ribosomal protein L13 family protein | embryo defective 1473 | -0.7 | 0.32 | -0.31 | ||
93 | AT5G22890 | C2H2 and C2HC zinc fingers superfamily protein | 0.7 | 0.31 | -0.3 | |||
94 | AT4G27520 | early nodulin-like protein 2 | AtENODL2, early nodulin-like protein 2 |
-0.7 | 0.29 | -0.32 | ||
95 | AT1G70730 | Phosphoglucomutase/phosphomannomutase family protein | phosphoglucomutase 2 | -0.7 | 0.34 | -0.33 | ||
96 | AT5G47050 | SBP (S-ribonuclease binding protein) family protein | 0.7 | 0.3 | -0.34 | |||
97 | AT5G09980 | elicitor peptide 4 precursor | elicitor peptide 4 precursor | 0.7 | 0.29 | -0.31 | ||
98 | AT3G55890 | Yippee family putative zinc-binding protein | 0.7 | 0.32 | -0.33 | |||
99 | AT2G37220 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.7 | 0.31 | -0.32 | |||
100 | AT3G21070 | NAD kinase 1 | NAD KINASE 1, NAD kinase 1 | 0.69 | 0.32 | -0.33 | ||
101 | AT3G26460 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.69 | 0.32 | -0.32 | |||
102 | AT1G17180 | glutathione S-transferase TAU 25 | glutathione S-transferase TAU 25, glutathione S-transferase TAU 25 |
0.68 | 0.32 | -0.31 | ||
103 | AT3G12760 | CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). |
0.68 | 0.31 | -0.31 | |||
104 | AT5G07870 | HXXXD-type acyl-transferase family protein | 0.68 | 0.31 | -0.3 | |||
105 | AT1G79180 | myb domain protein 63 | MYB DOMAIN PROTEIN 63, myb domain protein 63 |
0.68 | 0.33 | -0.32 | ||
106 | AT1G70790 | Calcium-dependent lipid-binding (CaLB domain) family protein |
0.67 | 0.33 | -0.31 | |||
107 | AT1G32340 | NDR1/HIN1-like 8 | NDR1/HIN1-like 8 | 0.67 | 0.31 | -0.32 | ||
108 | AT3G25250 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
AGC2, AGC2-1, AtOXI1, oxidative signal-inducible1 |
0.67 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
109 | C0133 | Kaempferol-3,7-O-α-dirhamnopyranoside | Kaempferol-3,7-O-α-L-dirhamnopyranoside | Kaempferol-3-rhamnoside-7-rhamnoside | kaempferol glucoside biosynthesis (Arabidopsis) | -0.84 | 0.47 | -0.47 | ||
110 | C0051 | Aconitic acid | cis-Aconitic acid | cis-Aconitate | glutamine biosynthesis III, TCA cycle variation V (plant), glyoxylate cycle, TCA cycle variation III (eukaryotic) |
0.71 | 0.43 | -0.45 |